Factsheet for Zm00001d013505_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033596_P001	Maize	extracellular	87.96	90.05
TraesCS4D01G033400.1	Wheat	cytosol	81.02	82.94
TraesCS4A01G277700.1	Wheat	golgi	81.48	82.63
HORVU0Hr1G040340.1	Barley	cytosol	81.02	82.16
TraesCS4B01G035400.1	Wheat	cytosol	81.02	82.16
GSMUA_Achr8P20400_001	Banana	cytosol	71.3	75.49
Bra036904.1-P	Field mustard	cytosol	70.37	74.51
Bra039714.1-P	Field mustard	cytosol	70.37	74.51
GSMUA_Achr10P...	Banana	unclear	70.37	74.51
CDY29774	Canola	cytosol	70.37	74.51
CDY50676	Canola	cytosol	70.37	74.51
CDY10294	Canola	cytosol	69.91	74.02
VIT_07s0151g00690.t01	Wine grape	extracellular	69.91	73.66
AT3G22630.1	Thale cress	cytosol	69.44	73.53
KRG93050	Soybean	cytosol	69.44	73.53
CDY10662	Canola	cytosol	69.44	73.53
Bra040831.1-P	Field mustard	cytosol	69.44	73.53
Bra037068.1-P	Field mustard	extracellular	68.98	73.04
Bra018359.1-P	Field mustard	extracellular	68.98	73.04
KRH36312	Soybean	endoplasmic reticulum	68.98	73.04
PGSC0003DMT400082075	Potato	cytosol	67.59	71.57
Solyc09g082320.2.1	Tomato	extracellular	67.13	71.08
Bra023815.1-P	Field mustard	cytosol	33.33	70.59
CDY42791	Canola	cytosol	69.91	70.56
AT4G14800.2	Thale cress	cytosol	68.98	69.3
CDY34241	Canola	cytosol, extracellular	53.7	69.05
CDY65369	Canola	cytosol	54.63	66.29
CDY57166	Canola	cytosol	68.98	66.22
CDY55258	Canola	cytosol	50.0	53.73

Protein Annotations

MapMan:19.2.6.1.2.4	Gene3D:3.60.20.10	UniProt:A0A1D6GK60	ProteinID:AQK63733.1	GO:GO:0000502	GO:GO:0003674
GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0051603
InterPro:IPR023333	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00227	ScanProsite:PS00854	PFscan:PS51476
PANTHER:PTHR11599	PANTHER:PTHR11599:SF99	InterPro:Proteasome_beta2	InterPro:Proteasome_bsu_CS	InterPro:Proteasome_suB-type	InterPro:Proteasome_sua/b
SUPFAM:SSF56235	UniParc:UPI00084294F2	EnsemblPlantsGene:Zm00001d013505	EnsemblPlants:Zm00001d013505_P001	EnsemblPlants:Zm00001d013505_T001	SEG:seg

Description

proteasome component2 proteasome component2

Coordinates

chr5:+:12944261..12947289

Molecular Weight (calculated)

23668.8 Da

IEP (calculated)

6.513

GRAVY (calculated)

0.163

Length

216 amino acids

Sequence
(BLAST)

001: MECVLGLVGR DFAVVAADTS AVQSILVHKT DEDKVMVLDS HKLLGASGEP GDRVQFTEFI QKNLHLYQFR NTIPLSTAAA ANFTRGELAT ALRKVPIQIN
101: LVSLFALLGL PCKKDVGASL YYIDYIATLH KIDKGAFGYG SYFCLSLMDK LYRPDMTVEE AVDLVDKCIK EIRLRLVVAP QNFVIKIVDK DGAREYARRE
201: LVGDSAPAEA AATVAA

Best Arabidopsis Sequence Match ( AT3G22630.1 )
(BLAST)

001: MECVFGLVGN GFAIVAADTS AVHSILLHKN NEDKIMVLDS HKLVAASGEP GDRVQFTEYV QKNVSLYKFR NGIPLTTAAA ANFTRGELAT ALRKNPYSVN
101: ILMAGYDDES GASLYYIDYI ATLHKVDKGA FGYGSYFSLS TMDRHYRSDM SVEEAIELVD KCILEIRSRL VVAPPNFVIK IVDKDGARDY AWRQSVKDVT
201: TAVV

Arabidopsis Description

PBD1Proteasome subunit beta type-2-A [Source:UniProtKB/Swiss-Prot;Acc:O23714]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.