Skip to main content
crop-pal logo
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: unclear

Predictor Summary:
  • cytosol 3
  • plastid 1
  • extracellular 3
  • golgi 3
  • plasma membrane 3
  • endoplasmic reticulum 3
  • vacuole 3
  • peroxisome 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:unclear
Any Predictor:cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:cytosol
EpiLoc:plastid
iPSORT:secretory
MultiLoc:peroxisome
Plant-mPloc:nucleus
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
unclear: 20177697
msms PMID: 20177697 doi
A Vertommen, B Panis, R Swennen, SC Carpentier
Division of Crop Biotechnics, Department of Biosystems, K U Leuven, Leuven, Belgium. Annelies.vertommen@biw.kuleuven.be
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P20400_001 Banana cytosol 97.06 97.06
VIT_07s0151g00690.t01 Wine grape extracellular 86.76 86.34
KRH36312 Soybean endoplasmic reticulum 86.27 86.27
KRG93050 Soybean cytosol 85.78 85.78
PGSC0003DMT400082075 Potato cytosol 85.29 85.29
Solyc09g082320.2.1 Tomato extracellular 84.31 84.31
Bra036904.1-P Field mustard cytosol 82.84 82.84
Bra039714.1-P Field mustard cytosol 82.84 82.84
CDY29774 Canola cytosol 82.84 82.84
CDY50676 Canola cytosol 82.84 82.84
AT3G22630.1 Thale cress cytosol 82.35 82.35
Bra040831.1-P Field mustard cytosol 81.86 81.86
CDY10294 Canola cytosol 81.86 81.86
CDY10662 Canola cytosol 81.86 81.86
Bra037068.1-P Field mustard extracellular 81.37 81.37
Bra018359.1-P Field mustard extracellular 81.37 81.37
Bra023815.1-P Field mustard cytosol 39.71 79.41
CDY42791 Canola cytosol 82.35 78.5
CDY34241 Canola cytosol, extracellular 63.73 77.38
AT4G14800.2 Thale cress cytosol 81.37 77.21
EER91045 Sorghum cytosol 76.96 74.76
Zm00001d033596_P001 Maize extracellular 76.96 74.41
CDY57166 Canola cytosol 81.37 73.78
TraesCS4D01G033400.1 Wheat cytosol 75.0 72.51
CDY65369 Canola cytosol 63.24 72.47
TraesCS4B01G035400.1 Wheat cytosol 75.49 72.3
TraesCS4A01G277700.1 Wheat golgi 75.0 71.83
HORVU0Hr1G040340.1 Barley cytosol 74.51 71.36
Zm00001d013505_P001 Maize cytosol 74.51 70.37
CDY55258 Canola cytosol 59.8 60.7
TraesCS5A01G432200.1 Wheat plastid 37.25 37.25
TraesCS5B01G434300.1 Wheat cytosol, extracellular 36.27 36.27
TraesCS5D01G440200.1 Wheat cytosol, extracellular 36.27 36.27
Protein Annotations
MapMan:19.2.6.1.2.4Gene3D:3.60.20.10GO:GO:0000502GO:GO:0003674GO:GO:0003824GO:GO:0004175
GO:GO:0004298GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737
GO:GO:0005839GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0009056
GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0051603EnsemblPlantsGene:GSMUA_Achr10G08560_001EnsemblPlants:GSMUA_Achr10P08560_001
EnsemblPlants:GSMUA_Achr10T08560_001InterPro:IPR023333InterPro:IPR029055UniProt:M0RGI2InterPro:Ntn_hydrolases_NPFAM:PF00227
ScanProsite:PS00854PFscan:PS51476PANTHER:PTHR11599PANTHER:PTHR11599:SF99InterPro:Proteasome_beta2InterPro:Proteasome_bsu_CS
InterPro:Proteasome_suB-typeInterPro:Proteasome_sua/bSUPFAM:SSF56235UniParc:UPI000294FAE2::
Description
Proteasome subunit beta type-2-A [Source:GMGC_GENE;Acc:GSMUA_Achr10G08560_001]
Coordinates
chr10:-:18500390..18503192
Molecular Weight (calculated)
22548.1 Da
IEP (calculated)
6.513
GRAVY (calculated)
0.032
Length
204 amino acids
Sequence
(BLAST)
001: MECVFGLVGD GFALVAADTS AVHSILVHKS NEDKVMILDS HKLLGASGEA GDRVQFTEYI QKNVHLYEFR NGIPLTTAAT ANFTRGELAI ALRKNPYFVN
101: ILLAGYDKNI GPSLYYIDYI ATLHKVDKGA FGYGSYFTLS MMDRHYKSGM SLEEAIDLVD KCIIEIRSRL VVAPPNFVIK IVDKDGAREY AWRESIKDAG
201: VSAA
Best Arabidopsis Sequence Match ( AT3G22630.1 )
(BLAST)
001: MECVFGLVGN GFAIVAADTS AVHSILLHKN NEDKIMVLDS HKLVAASGEP GDRVQFTEYV QKNVSLYKFR NGIPLTTAAA ANFTRGELAT ALRKNPYSVN
101: ILMAGYDDES GASLYYIDYI ATLHKVDKGA FGYGSYFSLS TMDRHYRSDM SVEEAIELVD KCILEIRSRL VVAPPNFVIK IVDKDGARDY AWRQSVKDVT
201: TAVV
Arabidopsis Description
PBD1Proteasome subunit beta type-2-A [Source:UniProtKB/Swiss-Prot;Acc:O23714]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.