Subcellular Localization
min:
: max
Winner_takes_all: unclear
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 1
- extracellular 3
- golgi 3
- plasma membrane 3
- endoplasmic reticulum 3
- vacuole 3
- peroxisome 1
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
unclear:
20177697
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr8P20400_001 | Banana | cytosol | 97.06 | 97.06 |
VIT_07s0151g00690.t01 | Wine grape | extracellular | 86.76 | 86.34 |
KRH36312 | Soybean | endoplasmic reticulum | 86.27 | 86.27 |
KRG93050 | Soybean | cytosol | 85.78 | 85.78 |
PGSC0003DMT400082075 | Potato | cytosol | 85.29 | 85.29 |
Solyc09g082320.2.1 | Tomato | extracellular | 84.31 | 84.31 |
Bra036904.1-P | Field mustard | cytosol | 82.84 | 82.84 |
Bra039714.1-P | Field mustard | cytosol | 82.84 | 82.84 |
CDY29774 | Canola | cytosol | 82.84 | 82.84 |
CDY50676 | Canola | cytosol | 82.84 | 82.84 |
AT3G22630.1 | Thale cress | cytosol | 82.35 | 82.35 |
Bra040831.1-P | Field mustard | cytosol | 81.86 | 81.86 |
CDY10294 | Canola | cytosol | 81.86 | 81.86 |
CDY10662 | Canola | cytosol | 81.86 | 81.86 |
Bra037068.1-P | Field mustard | extracellular | 81.37 | 81.37 |
Bra018359.1-P | Field mustard | extracellular | 81.37 | 81.37 |
Bra023815.1-P | Field mustard | cytosol | 39.71 | 79.41 |
CDY42791 | Canola | cytosol | 82.35 | 78.5 |
CDY34241 | Canola | cytosol, extracellular | 63.73 | 77.38 |
AT4G14800.2 | Thale cress | cytosol | 81.37 | 77.21 |
EER91045 | Sorghum | cytosol | 76.96 | 74.76 |
Zm00001d033596_P001 | Maize | extracellular | 76.96 | 74.41 |
CDY57166 | Canola | cytosol | 81.37 | 73.78 |
TraesCS4D01G033400.1 | Wheat | cytosol | 75.0 | 72.51 |
CDY65369 | Canola | cytosol | 63.24 | 72.47 |
TraesCS4B01G035400.1 | Wheat | cytosol | 75.49 | 72.3 |
TraesCS4A01G277700.1 | Wheat | golgi | 75.0 | 71.83 |
HORVU0Hr1G040340.1 | Barley | cytosol | 74.51 | 71.36 |
Zm00001d013505_P001 | Maize | cytosol | 74.51 | 70.37 |
CDY55258 | Canola | cytosol | 59.8 | 60.7 |
TraesCS5A01G432200.1 | Wheat | plastid | 37.25 | 37.25 |
TraesCS5B01G434300.1 | Wheat | cytosol, extracellular | 36.27 | 36.27 |
TraesCS5D01G440200.1 | Wheat | cytosol, extracellular | 36.27 | 36.27 |
Protein Annotations
MapMan:19.2.6.1.2.4 | Gene3D:3.60.20.10 | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004175 |
GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
GO:GO:0005839 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 |
GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0051603 | EnsemblPlantsGene:GSMUA_Achr10G08560_001 | EnsemblPlants:GSMUA_Achr10P08560_001 |
EnsemblPlants:GSMUA_Achr10T08560_001 | InterPro:IPR023333 | InterPro:IPR029055 | UniProt:M0RGI2 | InterPro:Ntn_hydrolases_N | PFAM:PF00227 |
ScanProsite:PS00854 | PFscan:PS51476 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF99 | InterPro:Proteasome_beta2 | InterPro:Proteasome_bsu_CS |
InterPro:Proteasome_suB-type | InterPro:Proteasome_sua/b | SUPFAM:SSF56235 | UniParc:UPI000294FAE2 | : | : |
Description
Proteasome subunit beta type-2-A [Source:GMGC_GENE;Acc:GSMUA_Achr10G08560_001]
Coordinates
chr10:-:18500390..18503192
Molecular Weight (calculated)
22548.1 Da
IEP (calculated)
6.513
GRAVY (calculated)
0.032
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MECVFGLVGD GFALVAADTS AVHSILVHKS NEDKVMILDS HKLLGASGEA GDRVQFTEYI QKNVHLYEFR NGIPLTTAAT ANFTRGELAI ALRKNPYFVN
101: ILLAGYDKNI GPSLYYIDYI ATLHKVDKGA FGYGSYFTLS MMDRHYKSGM SLEEAIDLVD KCIIEIRSRL VVAPPNFVIK IVDKDGAREY AWRESIKDAG
201: VSAA
101: ILLAGYDKNI GPSLYYIDYI ATLHKVDKGA FGYGSYFTLS MMDRHYKSGM SLEEAIDLVD KCIIEIRSRL VVAPPNFVIK IVDKDGAREY AWRESIKDAG
201: VSAA
001: MECVFGLVGN GFAIVAADTS AVHSILLHKN NEDKIMVLDS HKLVAASGEP GDRVQFTEYV QKNVSLYKFR NGIPLTTAAA ANFTRGELAT ALRKNPYSVN
101: ILMAGYDDES GASLYYIDYI ATLHKVDKGA FGYGSYFSLS TMDRHYRSDM SVEEAIELVD KCILEIRSRL VVAPPNFVIK IVDKDGARDY AWRQSVKDVT
201: TAVV
101: ILMAGYDDES GASLYYIDYI ATLHKVDKGA FGYGSYFSLS TMDRHYRSDM SVEEAIELVD KCILEIRSRL VVAPPNFVIK IVDKDGARDY AWRQSVKDVT
201: TAVV
Arabidopsis Description
PBD1Proteasome subunit beta type-2-A [Source:UniProtKB/Swiss-Prot;Acc:O23714]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.