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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plastid 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d040137_P001 Maize cytosol 50.0 21.85
AT5G42040.1 Thale cress cytosol 56.06 15.88
VIT_02s0025g02010.t01 Wine grape cytosol 59.09 14.61
KRH42301 Soybean nucleus 59.09 14.61
TraesCS4D01G050100.1 Wheat cytosol 56.06 14.4
KRH58430 Soybean nucleus 59.09 14.23
Zm00001d024319_P001 Maize cytosol, extracellular 57.58 14.23
EES13525 Sorghum cytosol 57.58 14.23
TraesCS7D01G059900.1 Wheat cytosol 56.06 13.86
TraesCS7A01G065500.1 Wheat cytosol, golgi 56.06 13.86
GSMUA_Achr1P21260_001 Banana cytosol 56.06 13.86
Os07t0435100-01 Rice cytosol, plasma membrane, plastid 56.06 13.86
TraesCS4B01G049700.1 Wheat cytosol 56.06 13.86
TraesCS4A01G422100.1 Wheat cytosol 56.06 13.86
Bra040915.1-P Field mustard cytosol 54.55 13.48
AT1G64520.1 Thale cress nucleus 54.55 13.48
GSMUA_Achr11P... Banana cytosol 54.55 13.48
CDY69533 Canola cytosol 54.55 13.48
CDY62022 Canola extracellular 54.55 13.48
CDY47840 Canola cytosol 54.55 13.48
Bra027705.1-P Field mustard cytosol 54.55 13.48
Solyc08g082700.2.1 Tomato cytosol, extracellular, nucleus, plastid 51.52 12.73
PGSC0003DMT400031956 Potato cytosol 51.52 12.73
TraesCS6B01G357900.1 Wheat cytosol 50.0 12.41
Zm00001d039483_P001 Maize cytosol 56.06 11.42
HORVU2Hr1G099580.8 Barley nucleus 42.42 8.24
TraesCS4D01G012200.1 Wheat mitochondrion 4.55 3.03
Protein Annotations
EnsemblPlants:Zm00001d019655_P001EnsemblPlants:Zm00001d019655_T001EnsemblPlantsGene:Zm00001d019655Gene3D:1.25.40.990GO:GO:0000502GO:GO:0005575
GO:GO:0005622GO:GO:0005623ProteinID:ONM53488.1UniParc:UPI0008437C22UniProt:A0A1D6HZI3MapMan:35.2
Description
26S proteasome non-ATPase regulatory subunit 8 homolog A
Coordinates
chr7:+:48319323..48319915
Molecular Weight (calculated)
7756.5 Da
IEP (calculated)
5.741
GRAVY (calculated)
-0.167
Length
66 amino acids
Sequence
(BLAST)
1: MEGANNQVLS VWQVVPHETY VYFMDLITKT VRDEIAGCSE KCMIPYLSTM MTFDRGRLKD MSWRTM
Best Arabidopsis Sequence Match ( AT5G42040.1 )
(BLAST)
001: MDPQLMEVSQ QFERFKAAFI IKDFDTCSSL LSQLKLFDHY LISLSLNALL LLTCALFFLC TRNRIPPSPQ ENLIMGLNLL RLLVQNRIAE FHTELGLLSS
101: ATLENPCIKH AVELEQSFME GAYNRVLSAR QTAPDETYVY FMDLLAKTIR DEIAGCSEKA YDHLSISEGC KMLLFSSDQQ LLTYVNEEHP EWEVKDGLVV
201: FQKTRETAPC KEIPSLQLIN QTLSYTRELE RIL
Arabidopsis Description
RPN12BPutative 26S proteasome non-ATPase regulatory subunit 8 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9FHY0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.