Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG27072 | Sorghum | plasma membrane | 96.09 | 97.42 |
| Os04t0608500-01 | Rice | plasma membrane | 27.4 | 90.91 |
| Zm00001d002373_P006 | Maize | cytosol, plasma membrane | 88.36 | 89.58 |
| TraesCS2D01G427700.2 | Wheat | endoplasmic reticulum, plasma membrane | 87.08 | 86.32 |
| TraesCS2A01G430100.2 | Wheat | golgi | 87.67 | 86.15 |
| TraesCS2B01G450800.2 | Wheat | cytosol, endoplasmic reticulum | 86.59 | 85.92 |
| Zm00001d049357_P001 | Maize | plasma membrane | 79.75 | 82.49 |
| Zm00001d024342_P001 | Maize | plasma membrane | 79.75 | 82.24 |
| HORVU1Hr1G081810.8 | Barley | cytosol, plasma membrane | 76.22 | 81.49 |
| TraesCS1A01G348400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 74.56 | 80.98 |
| GSMUA_Achr1P10550_001 | Banana | cytosol | 79.35 | 80.22 |
| TraesCS1B01G363000.1 | Wheat | cytosol | 78.57 | 80.14 |
| TraesCS1D01G351400.1 | Wheat | cytosol, endoplasmic reticulum | 77.98 | 79.54 |
| VIT_00s0215g00040.t01 | Wine grape | extracellular | 49.32 | 78.75 |
| VIT_10s0042g00800.t01 | Wine grape | cytosol, plastid | 76.71 | 78.01 |
| AT2G32730.1 | Thale cress | cytosol | 75.83 | 77.19 |
| CDY12178 | Canola | cytosol | 74.85 | 77.12 |
| CDX79472 | Canola | cytosol, plastid | 74.95 | 76.68 |
| CDY19162 | Canola | extracellular | 75.15 | 76.49 |
| Bra022899.1-P | Field mustard | cytosol, plastid | 75.15 | 76.49 |
| CDX84724 | Canola | cytosol, plastid | 75.15 | 76.42 |
| Bra021810.1-P | Field mustard | cytosol, plastid | 75.05 | 76.39 |
| KRH60454 | Soybean | endoplasmic reticulum | 75.15 | 76.34 |
| KRH41754 | Soybean | nucleus | 75.15 | 76.34 |
| Bra005560.1-P | Field mustard | plastid | 75.24 | 76.29 |
| CDY23791 | Canola | cytosol, plastid | 75.05 | 76.09 |
| AT1G04810.1 | Thale cress | cytosol | 74.17 | 75.72 |
| PGSC0003DMT400076219 | Potato | endoplasmic reticulum | 73.97 | 75.3 |
| CDY60623 | Canola | endoplasmic reticulum, golgi | 71.33 | 75.23 |
| Solyc09g091750.2.1 | Tomato | plastid | 73.87 | 75.2 |
| PGSC0003DMT400040763 | Potato | cytosol | 72.99 | 75.13 |
| Solyc05g053650.2.1 | Tomato | endoplasmic reticulum | 72.6 | 74.72 |
| VIT_00s0125g00350.t01 | Wine grape | cytosol | 12.82 | 70.81 |
| VIT_00s0215g00050.t01 | Wine grape | cytosol | 19.37 | 66.0 |
| Zm00001d015259_P001 | Maize | cytosol | 14.48 | 16.63 |
| Zm00001d053881_P001 | Maize | mitochondrion, plastid | 14.48 | 16.59 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:103642042 | MapMan:19.2.6.2.2.2 | InterPro:26S_Psome_Rpn2 | UniProt:A0A1D6JDW4 | ProteinID:AQK46007.1 |
| InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008540 | GO:GO:0009056 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0042176 | GO:GO:0050790 |
| InterPro:IPR011989 | PFAM:PF01851 | PFAM:PF13646 | PIRSF:PIRSF015947 | PANTHER:PTHR10943 | PANTHER:PTHR10943:SF10 |
| InterPro:Proteasome/cyclosome_rpt | SUPFAM:SSF48371 | TMHMM:TMhelix | UniParc:UPI000843B35E | EnsemblPlantsGene:Zm00001d026265 | EnsemblPlants:Zm00001d026265_P002 |
| EnsemblPlants:Zm00001d026265_T002 | SEG:seg | : | : | : | : |
Description
26S proteasome non-ATPase regulatory subunit 1 homolog B
Coordinates
chr10:-:142361348..142368000
Molecular Weight (calculated)
110982.0 Da
IEP (calculated)
4.853
GRAVY (calculated)
-0.129
Length
1022 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAMEAVATVS SASGLLAMLQ EPAPELKLHA LARLNSVVHL FWPEISTSVP TIESLYEDEE FEQRQLAALV VSKVFYYLGE LNDSLSYALG AGPLFDVSDD
0101: SDYAHALLGE KGLKFLAFVN AKALDEYASI KTRALKATEE EENIDPRLEA IVERMLEKCI FDGKYQQAMG MAVECRRLDK LEEAIVGCDN IQGALSYCIN
0201: LSHQYVNHRE YRFEVLRCLV KIYQTLPNPD YLSICQCLMF LGEPETVACI LDKLLSGNKD DALLAYQIAF DLVENENQAF LLNVRNRLSS PTPVPSNPDS
0301: GPAVQDDQTA STVGTDTEAA GDVQMRDDTS TPNGTAHSVD PNEVAHADRL EKIKGILSGE TSIQLALQFL YSHNRSDLLI LKTIKQAVEM RNSVCHSATI
0401: CANAIMHAGT TVDTFLRENL EWLSRATNWA KFSATAGLGV IHRGHLQQGR ALMAPYLPQS GAVGGGSPYS EGGALYALGL IHANHGEGIK QFLRESLRNS
0501: SAEVIQHGAC LGLGLAALGT ADEEIYEDIK NVLYTDSAVA GEAAGIGMGL LMVGTASEKA SEMLAYAHDT QHEKIIRGLS LGIALTVYGR EEEADTLIEQ
0601: MTRDQDPILR YGGMYALALA YRGTANNKAI HQLLHFAVSD VSDDVRRTAV MALGFVLYNE PEQTPRIVSL LSESYNPHVR YGAALAVGIS CAGSGLSDAI
0701: SLLEPLTSDV VDFVRQGALI AMAMVMIQTN ESFDSRVGAF RRQLEKIILD KHEDTMSKMG AILASGILDA GGRNVTIKLL SRNKHDKLTA VIGLAVFSQF
0801: WYWYPLLYFI SLAFSPTAFI GLNSDLKVPK FEFLSHAKPS LFEYPKPTTQ QTTTSTVKLP AAILSTYAKA KSRAKKDAES KANQEKATEE ASGSTSSKTA
0901: KAQEKDADAM QVDNASEKKA PEPEATYQLL TNPARVIPAQ EKFIKLLENS RYVPVKPAPS GFILLRDLQP TEAEDLALTD APTTVAGSTG NTAPAAGQQG
1001: SGSSAMAVDD EPQPPQPFEY TS
0101: SDYAHALLGE KGLKFLAFVN AKALDEYASI KTRALKATEE EENIDPRLEA IVERMLEKCI FDGKYQQAMG MAVECRRLDK LEEAIVGCDN IQGALSYCIN
0201: LSHQYVNHRE YRFEVLRCLV KIYQTLPNPD YLSICQCLMF LGEPETVACI LDKLLSGNKD DALLAYQIAF DLVENENQAF LLNVRNRLSS PTPVPSNPDS
0301: GPAVQDDQTA STVGTDTEAA GDVQMRDDTS TPNGTAHSVD PNEVAHADRL EKIKGILSGE TSIQLALQFL YSHNRSDLLI LKTIKQAVEM RNSVCHSATI
0401: CANAIMHAGT TVDTFLRENL EWLSRATNWA KFSATAGLGV IHRGHLQQGR ALMAPYLPQS GAVGGGSPYS EGGALYALGL IHANHGEGIK QFLRESLRNS
0501: SAEVIQHGAC LGLGLAALGT ADEEIYEDIK NVLYTDSAVA GEAAGIGMGL LMVGTASEKA SEMLAYAHDT QHEKIIRGLS LGIALTVYGR EEEADTLIEQ
0601: MTRDQDPILR YGGMYALALA YRGTANNKAI HQLLHFAVSD VSDDVRRTAV MALGFVLYNE PEQTPRIVSL LSESYNPHVR YGAALAVGIS CAGSGLSDAI
0701: SLLEPLTSDV VDFVRQGALI AMAMVMIQTN ESFDSRVGAF RRQLEKIILD KHEDTMSKMG AILASGILDA GGRNVTIKLL SRNKHDKLTA VIGLAVFSQF
0801: WYWYPLLYFI SLAFSPTAFI GLNSDLKVPK FEFLSHAKPS LFEYPKPTTQ QTTTSTVKLP AAILSTYAKA KSRAKKDAES KANQEKATEE ASGSTSSKTA
0901: KAQEKDADAM QVDNASEKKA PEPEATYQLL TNPARVIPAQ EKFIKLLENS RYVPVKPAPS GFILLRDLQP TEAEDLALTD APTTVAGSTG NTAPAAGQQG
1001: SGSSAMAVDD EPQPPQPFEY TS
0001: MATPMVSSAG GLLAMLNEPH PVLKLHALSN LNNLVDQFWP EISTSVPIIE SLYEDEEFDL HQRQLAALLV SKVFYYLGEL NDSLSYALGA GPLFDVSEDS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
Arabidopsis Description
RPN2A26S proteasome non-ATPase regulatory subunit 1 homolog A [Source:UniProtKB/Swiss-Prot;Acc:O48844]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.