Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
unclear: 25769308 |
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G427700.2 | Wheat | endoplasmic reticulum, plasma membrane | 98.85 | 99.71 |
| TraesCS2B01G450800.2 | Wheat | cytosol, endoplasmic reticulum | 98.08 | 99.03 |
| Os04t0608500-01 | Rice | plasma membrane | 26.92 | 90.91 |
| KXG27072 | Sorghum | plasma membrane | 86.92 | 89.68 |
| Zm00001d026265_P002 | Maize | plasma membrane | 86.15 | 87.67 |
| TraesCS1A01G348400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 78.46 | 86.72 |
| Zm00001d002373_P006 | Maize | cytosol, plasma membrane | 81.25 | 83.83 |
| GSMUA_Achr1P10550_001 | Banana | cytosol | 76.44 | 78.64 |
| VIT_00s0215g00040.t01 | Wine grape | extracellular | 47.12 | 76.56 |
| VIT_10s0042g00800.t01 | Wine grape | cytosol, plastid | 73.75 | 76.32 |
| AT2G32730.1 | Thale cress | cytosol | 72.88 | 75.5 |
| CDX79472 | Canola | cytosol, plastid | 72.4 | 75.38 |
| KRH60454 | Soybean | endoplasmic reticulum | 72.69 | 75.15 |
| KRH41754 | Soybean | nucleus | 72.6 | 75.05 |
| Bra022899.1-P | Field mustard | cytosol, plastid | 72.4 | 75.0 |
| CDY12178 | Canola | cytosol | 71.54 | 75.0 |
| CDX84724 | Canola | cytosol, plastid | 72.4 | 74.93 |
| CDY19162 | Canola | extracellular | 72.12 | 74.7 |
| Bra021810.1-P | Field mustard | cytosol, plastid | 72.02 | 74.6 |
| CDY23791 | Canola | cytosol, plastid | 72.12 | 74.4 |
| Bra005560.1-P | Field mustard | plastid | 71.92 | 74.21 |
| PGSC0003DMT400076219 | Potato | endoplasmic reticulum | 71.35 | 73.9 |
| PGSC0003DMT400040763 | Potato | cytosol | 70.48 | 73.82 |
| AT1G04810.1 | Thale cress | cytosol | 70.87 | 73.63 |
| Solyc09g091750.2.1 | Tomato | plastid | 71.06 | 73.61 |
| CDY60623 | Canola | endoplasmic reticulum, golgi | 68.56 | 73.58 |
| Solyc05g053650.2.1 | Tomato | endoplasmic reticulum | 70.19 | 73.51 |
| VIT_00s0125g00350.t01 | Wine grape | cytosol | 12.69 | 71.35 |
| VIT_00s0215g00050.t01 | Wine grape | cytosol | 18.46 | 64.0 |
| TraesCS7A01G421700.1 | Wheat | cytosol | 13.27 | 15.68 |
| TraesCS7A01G421600.1 | Wheat | mitochondrion | 12.21 | 15.54 |
| TraesCS6A01G116500.1 | Wheat | golgi, unclear | 13.27 | 15.42 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.6.2.2.2 | InterPro:26S_Psome_Rpn2 | InterPro:ARM-like | InterPro:ARM-type_fold | ncoils:Coil |
| GO:GO:0000502 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0042176 |
| InterPro:IPR011989 | PFAM:PF01851 | PFAM:PF13646 | PIRSF:PIRSF015947 | PANTHER:PTHR10943 | PANTHER:PTHR10943:SF10 |
| InterPro:Proteasome/cyclosome_rpt | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS2A01G430100 | EnsemblPlants:TraesCS2A01G430100.2 | SEG:seg | : |
Description
No Description!
Coordinates
chr2A:+:683505951..683511573
Molecular Weight (calculated)
112260.0 Da
IEP (calculated)
4.845
GRAVY (calculated)
-0.141
Length
1040 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAVATVSSA GGILAMLHEP AEELKLHALA SLNSVVHLFY PEISTSIPTI ESLYEDEEFD QRQLAALVVS KVFYYLGELN DALLYALGAG PLFDVSEDSD
0101: YAHALLAKAL DEYASFKTRA SKATEEEENV DPRLEAIVER MLEKCVLDGK YQQAMGMAVE CRRLDKLEEA IVRCDNIHGA LSYCINLSHQ YVSHREYRCE
0201: VLRCLVKIYQ TLPHPDFLSI CQCLMFLGEP ETVANILDTL ISGSKDDALL AYQIAFDLVE NENQAFLLNV RNRLDSQTPG QSNPDSGSAL PVDQTVNAGT
0301: TSTEPAGDVQ MGDDTTTANG NAHPVDPNEA VHADKLAKLK GILSGEKSIQ LTLQFLYSHN RSDLLILKTI KQAVEMRNSV CHSATICSNA IMHAGTTVDT
0401: FLRENLEWLS RATNWAKFSA TAGLGVIHRG HLQQGRALMA PYLPQSGAVG GGSPYSEGGA LYALGLIHAN HGEGIKQFLR ESLRNTSAEV IQHGACLGLG
0501: LASLGTADEE VFEDIKNVLY TDSAVAGEAA GIGMGLLMVG TASEKAAEML AYAHDTQHEK IIRGLALGIA LTVYGREEEA DTLIEQMTRD QDPILRYGGM
0601: YALALAYRGT ANNKAIHQLL HFAVSDVSDD VRRTAVMGLG FVLYNEPEQT PRIVSLLSES YNPHVRYGAA LAVGISCAGT GLSDAISLLE PLTSDVVDFV
0701: RQGALIAMAM VMIQTNESFD SRVGTFRRQL EKIILDKHED TMSKMGAILA SGILDAGGRN VTIKLLSRNK HDKLTAVIGL AVFTQFWYWY PLLYFISLAF
0801: SPTAIIGLNS NLEVPKFEFL SHAKPSLFEY PKPTTQQTTT SAVKLPTAIL STYAKAKSRA KKDAESKAAN QEKTAEAESK ANQEKSTAES KPSQEKSTDA
0901: ESKAKTTEDA SGSTSGDAAK TQEKDGDAMQ VDGAAEKKAP EPEPAFQILA NPARVVPAQE KFIKFIEGSR YVPVRPAPCG FILLRDTQPS EAEELVLTDA
1001: PATVATGAGN SAAAAAAGQG SAAMAVDDEP QPPQPFEYSA
0101: YAHALLAKAL DEYASFKTRA SKATEEEENV DPRLEAIVER MLEKCVLDGK YQQAMGMAVE CRRLDKLEEA IVRCDNIHGA LSYCINLSHQ YVSHREYRCE
0201: VLRCLVKIYQ TLPHPDFLSI CQCLMFLGEP ETVANILDTL ISGSKDDALL AYQIAFDLVE NENQAFLLNV RNRLDSQTPG QSNPDSGSAL PVDQTVNAGT
0301: TSTEPAGDVQ MGDDTTTANG NAHPVDPNEA VHADKLAKLK GILSGEKSIQ LTLQFLYSHN RSDLLILKTI KQAVEMRNSV CHSATICSNA IMHAGTTVDT
0401: FLRENLEWLS RATNWAKFSA TAGLGVIHRG HLQQGRALMA PYLPQSGAVG GGSPYSEGGA LYALGLIHAN HGEGIKQFLR ESLRNTSAEV IQHGACLGLG
0501: LASLGTADEE VFEDIKNVLY TDSAVAGEAA GIGMGLLMVG TASEKAAEML AYAHDTQHEK IIRGLALGIA LTVYGREEEA DTLIEQMTRD QDPILRYGGM
0601: YALALAYRGT ANNKAIHQLL HFAVSDVSDD VRRTAVMGLG FVLYNEPEQT PRIVSLLSES YNPHVRYGAA LAVGISCAGT GLSDAISLLE PLTSDVVDFV
0701: RQGALIAMAM VMIQTNESFD SRVGTFRRQL EKIILDKHED TMSKMGAILA SGILDAGGRN VTIKLLSRNK HDKLTAVIGL AVFTQFWYWY PLLYFISLAF
0801: SPTAIIGLNS NLEVPKFEFL SHAKPSLFEY PKPTTQQTTT SAVKLPTAIL STYAKAKSRA KKDAESKAAN QEKTAEAESK ANQEKSTAES KPSQEKSTDA
0901: ESKAKTTEDA SGSTSGDAAK TQEKDGDAMQ VDGAAEKKAP EPEPAFQILA NPARVVPAQE KFIKFIEGSR YVPVRPAPCG FILLRDTQPS EAEELVLTDA
1001: PATVATGAGN SAAAAAAGQG SAAMAVDDEP QPPQPFEYSA
0001: MATPMVSSAG GLLAMLNEPH PVLKLHALSN LNNLVDQFWP EISTSVPIIE SLYEDEEFDL HQRQLAALLV SKVFYYLGEL NDSLSYALGA GPLFDVSEDS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
Arabidopsis Description
RPN2A26S proteasome non-ATPase regulatory subunit 1 homolog A [Source:UniProtKB/Swiss-Prot;Acc:O48844]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.