Factsheet for Bra021810.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 4
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19162	Canola	extracellular	99.9	99.9
CDY23791	Canola	cytosol, plastid	99.2	98.81
Bra022899.1-P	Field mustard	cytosol, plastid	95.92	95.92
AT2G32730.1	Thale cress	cytosol	94.62	94.62
Bra005560.1-P	Field mustard	plastid	94.72	94.35
KRH41754	Soybean	nucleus	83.27	83.1
KRH60454	Soybean	endoplasmic reticulum	82.77	82.6
PGSC0003DMT400040763	Potato	cytosol	80.08	80.97
Solyc05g053650.2.1	Tomato	endoplasmic reticulum	79.68	80.56
PGSC0003DMT400076219	Potato	endoplasmic reticulum	80.28	80.28
Solyc09g091750.2.1	Tomato	plastid	80.18	80.18
GSMUA_Achr1P10550_001	Banana	cytosol	78.88	78.34
KXG27072	Sorghum	plasma membrane	76.59	76.29
Zm00001d026265_P002	Maize	plasma membrane	76.39	75.05
Os04t0608500-01	Rice	plasma membrane	22.91	74.68
Zm00001d049357_P001	Maize	plasma membrane	73.41	74.6
Os08t0224700-01	Rice	plasma membrane	73.11	74.37
Zm00001d024342_P001	Maize	plasma membrane	72.91	73.86
EES13543	Sorghum	endoplasmic reticulum	72.51	73.68
Zm00001d002373_P006	Maize	cytosol, plasma membrane	73.51	73.21
HORVU1Hr1G081810.8	Barley	cytosol, plasma membrane	68.92	72.38
TraesCS1A01G348400.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	67.63	72.16
TraesCS2D01G427700.2	Wheat	endoplasmic reticulum, plasma membrane	74.0	72.07
TraesCS2A01G430100.2	Wheat	golgi	74.6	72.02
VIT_00s0125g00350.t01	Wine grape	cytosol	13.25	71.89
TraesCS2B01G450800.2	Wheat	cytosol, endoplasmic reticulum	73.61	71.75
TraesCS1B01G363000.1	Wheat	cytosol	70.62	70.76
TraesCS1D01G351400.1	Wheat	cytosol, endoplasmic reticulum	70.42	70.56
Bra011030.1-P	Field mustard	cytosol	14.34	16.16
Bra024200.1-P	Field mustard	cytosol	14.34	16.16
Bra010366.1-P	Field mustard	cytosol	13.94	15.8
Bra036488.1-P	Field mustard	cytosol, extracellular, plasma membrane	13.05	15.73
Bra016824.1-P	Field mustard	plastid, vacuole	3.09	8.99
Bra003811.1-P	Field mustard	endoplasmic reticulum	1.79	7.32

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.2.6.2.2.2	InterPro:26S_Psome_Rpn2	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra021810
EnsemblPlants:Bra021810.1	EnsemblPlants:Bra021810.1-P	GO:GO:0000502	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0008540	GO:GO:0009056
GO:GO:0016020	GO:GO:0016021	GO:GO:0019538	GO:GO:0030234	GO:GO:0042176	GO:GO:0050790
InterPro:IPR011989	UniProt:M4DZ63	PFAM:PF01851	PFAM:PF13646	PIRSF:PIRSF015947	PANTHER:PTHR10943
PANTHER:PTHR10943:SF10	InterPro:Proteasome/cyclosome_rpt	SUPFAM:SSF48371	TMHMM:TMhelix	UniParc:UPI00025450FF	SEG:seg

Description

AT2G32730 (E=0.0) | 26S proteasome regulatory subunit, putative

Coordinates

chrA04:+:14638497..14643107

Molecular Weight (calculated)

108929.0 Da

IEP (calculated)

5.084

GRAVY (calculated)

-0.063

Length

1004 amino acids

Sequence
(BLAST)

0001: MAAVMVSSAG GLLAMLNEPQ PSLKHHALSH LNNLVDRFWP EISTSVPIIE SLYEDEEFDM HQRQLAALLV SKVFYYLGEL NDSLSYALGA GPQFDVSEDT
0101: DYVHTLLAKA IDEYASLRSK AVESNDMVDI DPRLEAIVER MLEKCITDGK YQQAMGIAIE CRRLDKLEEA IVKSDNVQGT LAYCINVSHS FVNRREYRHE
0201: VLTLLVKVYQ QLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSESKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RIVETVQTVE ITDAPAENPS
0301: GDVQMADGAP APTPTPAPAP TIVHETDPVD ATYAERLTKI KGILSGETSI QLTLQFLYSH NKSDLLILKT IKQSVEMRNS VCHSATIYAN AIMHAGTTVD
0401: TFLRENLDWL SRATNWAKFS ATAGLGVIHR GHLQQGRSLM APYLPQGGAG GGGSPYSEGG ALYALGLIHA NHGEGIKQFL RDSLRSTNVE VIQHGACLGL
0501: GLSALGTADE EIYDDVKSVL YTDSAVAGEA AGISMGLLLV GTATEKASEM LAYAHETQHE KIIRGLALGI ALTVYGREEG ADTLIEQMTR DQDPIIRYGG
0601: MYALALAYSG TANNKAIRQL LHFAVSDVSD DVRRTAVLAL GFVLYSDPEQ TPRIVSLLSE SYNPHVRYGA ALAVGISCAG TGLSEAISLL APLTSDVVDF
0701: VRQGALIAMA MVMVQISEAS DSRVGKFRRQ LEKIILDKHE DTMSKMGAIL ASGILDAGGR NVTIRLLSKT KHDKVTAVIG LAVFSQFWYW YPLIYFISLA
0801: FSPTAFIGLN YDLKVPKFEF MSHAKPSLFE YPKPTTVPTA NTAAKLPTAV LSTSVKAKAR AKKDAEQKAN AEKASGAEKP VSESGSGKDK EGDSMQVDST
0901: ATVEKKAAEP EAAFEILVNP ARVVPAQEKY IKLLEDSRYV PVKLAPSGFV LLKDLREHEP EVLSLTDAPT STASPAAAAT QGTTASAMAV DDEPQPPQAF
1001: EYAT

Best Arabidopsis Sequence Match ( AT2G32730.1 )
(BLAST)

0001: MATPMVSSAG GLLAMLNEPH PVLKLHALSN LNNLVDQFWP EISTSVPIIE SLYEDEEFDL HQRQLAALLV SKVFYYLGEL NDSLSYALGA GPLFDVSEDS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS

Arabidopsis Description

RPN2A26S proteasome non-ATPase regulatory subunit 1 homolog A [Source:UniProtKB/Swiss-Prot;Acc:O48844]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.