Factsheet for Bra016824.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole

Predictor Summary:

nucleus 1
plastid 5
cytosol 1
vacuole 4
mitochondrion 1
plasma membrane 3
extracellular 2
endoplasmic reticulum 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid, vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	mitochondrion, plasma membrane, plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003811.1-P	Field mustard	endoplasmic reticulum	5.51	7.72
Bra024200.1-P	Field mustard	cytosol	15.94	6.17
Bra011030.1-P	Field mustard	cytosol	15.36	5.95
Bra036488.1-P	Field mustard	cytosol, extracellular, plasma membrane	14.2	5.88
Bra010366.1-P	Field mustard	cytosol	13.91	5.42
Bra005560.1-P	Field mustard	plastid	9.28	3.17
Bra021810.1-P	Field mustard	cytosol, plastid	8.99	3.09
Bra022899.1-P	Field mustard	cytosol, plastid	8.99	3.09

Protein Annotations

MapMan:24.2.4.1.1	EnsemblPlantsGene:Bra016824	EnsemblPlants:Bra016824.1	EnsemblPlants:Bra016824.1-P	ncoils:Coil	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238
GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:M4DJZ6	InterPro:MATE_fam
PFAM:PF01554	PANTHER:PTHR11206	PANTHER:PTHR11206:SF140	TMHMM:TMhelix	UniParc:UPI00025463FD	SEG:seg

Description

AT1G11670 (E=1e-069) | MATE efflux family protein

Coordinates

chrA08:+:20157938..20161544

Molecular Weight (calculated)

37534.4 Da

IEP (calculated)

9.529

GRAVY (calculated)

-0.196

Length

345 amino acids

Sequence
(BLAST)

001: MSISAISFMV SVGFNAAASV RVSNELGAGN PRSAAFSTAV TTGVSFLLSL FEAVLILSWR NVISYVFTDS PAVAEAVAEL TPYLAITIVL NGVQPVLSGV
101: AVGCGWQAFV AYVNIGCYYI VGIPIGYVLG FTYDMGAKDL IQDQSIHPPQ LIEMAPGPDP NSVGYGAKRD EATSKVPLKD PKKKDDKKEE DLNLELYIER
201: VQDPNPELQK AALESMRQEI RASTSSMTSV PKPLKFLRPH YGTLKKFHKK YGGVRSQGAE VILDLDEATV KEMRKQEEIA KAKLAMESKK KLAEKAAAKA
301: AIRAQKEAEK KEQKEREKAA KKKTGGSNAY EAISGFLDQG KLRLL

Best Arabidopsis Sequence Match ( AT1G11670.1 )
(BLAST)

001: MGSEATTAVN NLQQPLLEST KSEADFRMES VLTDTHLSYF RRIYLASLIE MKYLFHLAAP AIFVYVINNG MSMLTRIFAG RLGSMQLAAA SLGNSGFNMF
101: TLGLMLGMGS AVETLCGQAH GAHRYDMLGV YLQRSTIVLV ITGLPMTLLF IFSKPLLISL GEPADVASVA SVFVYGMIPM IFAYAVNFPI QKFLQSQSIV
201: TPSAYISAAT LVIHLILSWL SVFKFGWGLL GLSVVHSLSW WIIVLAQIIY IKISPRCRRT WDGFSWKAFD GLWDFFQLSA ASAVMLCLES WYSQILVLLA
301: GLLKDPELAL DSLAICMSIS AMSFMVSVGF NAAASVRVSN ELGAGNPRSA AFSTAVTTGV SFLLSLFEAI VILSWRHVIS YIFTDSPAVA EAVAELSPFL
401: AITIVLNGVQ PVLSGVAVGC GWQAYVAYVN IGCYYIVGIP IGYVLGFTYD MGARGIWTGM IGGTLMQTII LVIVTFRTDW DKEVEKASRR LDQWEDTSPL
501: LKQ

Arabidopsis Description

DTX36Protein DETOXIFICATION 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.