Factsheet for Bra022899.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 3
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84724	Canola	cytosol, plastid	99.7	99.6
CDX79472	Canola	cytosol, plastid	98.8	99.3
Bra021810.1-P	Field mustard	cytosol, plastid	95.92	95.92
AT2G32730.1	Thale cress	cytosol	95.42	95.42
Bra005560.1-P	Field mustard	plastid	95.02	94.64
KRH41754	Soybean	nucleus	83.37	83.2
KRH60454	Soybean	endoplasmic reticulum	82.77	82.6
PGSC0003DMT400040763	Potato	cytosol	79.98	80.87
Solyc05g053650.2.1	Tomato	endoplasmic reticulum	79.58	80.46
Solyc09g091750.2.1	Tomato	plastid	80.08	80.08
PGSC0003DMT400076219	Potato	endoplasmic reticulum	80.08	80.08
GSMUA_Achr1P10550_001	Banana	cytosol	79.28	78.73
KXG27072	Sorghum	plasma membrane	76.49	76.19
Zm00001d026265_P002	Maize	plasma membrane	76.49	75.15
Zm00001d049357_P001	Maize	plasma membrane	73.21	74.39
Os08t0224700-01	Rice	plasma membrane	73.01	74.27
Os04t0608500-01	Rice	plasma membrane	22.71	74.03
Zm00001d024342_P001	Maize	plasma membrane	72.81	73.76
EES13543	Sorghum	endoplasmic reticulum	72.41	73.58
Zm00001d002373_P006	Maize	cytosol, plasma membrane	73.31	73.02
HORVU1Hr1G081810.8	Barley	cytosol, plasma membrane	69.32	72.8
TraesCS1A01G348400.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	68.03	72.58
TraesCS2D01G427700.2	Wheat	endoplasmic reticulum, plasma membrane	74.4	72.45
TraesCS2A01G430100.2	Wheat	golgi	75.0	72.4
TraesCS2B01G450800.2	Wheat	cytosol, endoplasmic reticulum	74.1	72.23
VIT_00s0125g00350.t01	Wine grape	cytosol	13.25	71.89
TraesCS1B01G363000.1	Wheat	cytosol	71.02	71.16
TraesCS1D01G351400.1	Wheat	cytosol, endoplasmic reticulum	70.62	70.76
Bra011030.1-P	Field mustard	cytosol	14.34	16.16
Bra024200.1-P	Field mustard	cytosol	14.34	16.16
Bra036488.1-P	Field mustard	cytosol, extracellular, plasma membrane	13.05	15.73
Bra010366.1-P	Field mustard	cytosol	13.84	15.69
Bra016824.1-P	Field mustard	plastid, vacuole	3.09	8.99
Bra003811.1-P	Field mustard	endoplasmic reticulum	1.69	6.91

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.2.6.2.2.2	InterPro:26S_Psome_Rpn2	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra022899
EnsemblPlants:Bra022899.1	EnsemblPlants:Bra022899.1-P	GO:GO:0000502	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0008540	GO:GO:0009056
GO:GO:0016020	GO:GO:0016021	GO:GO:0019538	GO:GO:0030234	GO:GO:0042176	GO:GO:0050790
InterPro:IPR011989	UniProt:M4E299	PFAM:PF13646	PIRSF:PIRSF015947	PANTHER:PTHR10943	PANTHER:PTHR10943:SF10
SUPFAM:SSF48371	TMHMM:TMhelix	UniParc:UPI00025403A4	SEG:seg	:	:

Description

AT2G32730 (E=0.0) | 26S proteasome regulatory subunit, putative

Coordinates

chrA03:+:7642785..7647599

Molecular Weight (calculated)

108905.0 Da

IEP (calculated)

5.021

GRAVY (calculated)

-0.088

Length

1004 amino acids

Sequence
(BLAST)

0001: MAAAMVSSAG GLLAMLNEPQ PSLKHHALSH LNNLVDRFWP EISTSVPIIE SLYEDEEFDL HQRQLAALLV SKVFYYLGEL NDSLSYALGA GPSFDVSEDT
0101: DYVHTLLAKA IDEYASLRSK AFESNEMVDI DSRLEAIVER MLEKCITDGK YQQAMGIAIE CRRLDKLEEA ITKSDNVEGT LSYCINVSHS FVNRREYRHE
0201: VLTLLVKVYQ QLSSPDYLSI CQCLMFLDEP QGVATILEKL LRSESKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RPVEAVQAVE TTTAPTENPS
0301: GDVPMADGTP APTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKE FLRDSLRSTN VEVIQHGACL GLGLSAIGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGKFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVA TANTAAKLPT AVLSTSVKAK ARAKKEAEQK ANAEKTSGAE KSVNESGSGK EKGSTEKEGD AMQVDSSATA
0901: EKKAAEPEPA FEILVNPARV VPAQEKYIKL LEDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGAAAAT QGTTASAMAV DDEPQPPQAF
1001: EYAS

Best Arabidopsis Sequence Match ( AT2G32730.1 )
(BLAST)

0001: MATPMVSSAG GLLAMLNEPH PVLKLHALSN LNNLVDQFWP EISTSVPIIE SLYEDEEFDL HQRQLAALLV SKVFYYLGEL NDSLSYALGA GPLFDVSEDS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS

Arabidopsis Description

RPN2A26S proteasome non-ATPase regulatory subunit 1 homolog A [Source:UniProtKB/Swiss-Prot;Acc:O48844]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.