Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 2
- mitochondrion 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g091750.2.1 | Tomato | plastid | 98.61 | 98.61 |
| PGSC0003DMT400040763 | Potato | cytosol | 89.94 | 90.94 |
| VIT_10s0042g00800.t01 | Wine grape | cytosol, plastid | 85.46 | 85.37 |
| VIT_00s0215g00040.t01 | Wine grape | extracellular | 53.69 | 84.22 |
| KRH60454 | Soybean | endoplasmic reticulum | 82.07 | 81.91 |
| KRH41754 | Soybean | nucleus | 82.07 | 81.91 |
| AT2G32730.1 | Thale cress | cytosol | 81.27 | 81.27 |
| CDX79472 | Canola | cytosol, plastid | 79.98 | 80.38 |
| CDY19162 | Canola | extracellular | 80.38 | 80.38 |
| Bra021810.1-P | Field mustard | cytosol, plastid | 80.28 | 80.28 |
| CDY12178 | Canola | cytosol | 79.28 | 80.24 |
| Bra022899.1-P | Field mustard | cytosol, plastid | 80.08 | 80.08 |
| CDX84724 | Canola | cytosol, plastid | 79.98 | 79.9 |
| CDY23791 | Canola | cytosol, plastid | 80.18 | 79.86 |
| Bra005560.1-P | Field mustard | plastid | 79.98 | 79.66 |
| AT1G04810.1 | Thale cress | cytosol | 79.18 | 79.42 |
| CDY60623 | Canola | endoplasmic reticulum, golgi | 75.7 | 78.43 |
| GSMUA_Achr1P10550_001 | Banana | cytosol | 77.39 | 76.85 |
| KXG27072 | Sorghum | plasma membrane | 75.6 | 75.3 |
| Zm00001d026265_P002 | Maize | plasma membrane | 75.3 | 73.97 |
| Os08t0224700-01 | Rice | plasma membrane | 72.21 | 73.45 |
| Zm00001d049357_P001 | Maize | plasma membrane | 72.11 | 73.28 |
| EES13543 | Sorghum | endoplasmic reticulum | 71.91 | 73.08 |
| Zm00001d024342_P001 | Maize | plasma membrane | 72.01 | 72.96 |
| HORVU1Hr1G081810.8 | Barley | cytosol, plasma membrane | 69.02 | 72.49 |
| Zm00001d002373_P006 | Maize | cytosol, plasma membrane | 72.71 | 72.42 |
| Os04t0608500-01 | Rice | plasma membrane | 22.21 | 72.4 |
| TraesCS1A01G348400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 67.43 | 71.94 |
| VIT_00s0125g00350.t01 | Wine grape | cytosol | 13.25 | 71.89 |
| TraesCS2A01G430100.2 | Wheat | golgi | 73.9 | 71.35 |
| TraesCS2D01G427700.2 | Wheat | endoplasmic reticulum, plasma membrane | 73.21 | 71.29 |
| TraesCS2B01G450800.2 | Wheat | cytosol, endoplasmic reticulum | 73.11 | 71.26 |
| VIT_00s0215g00050.t01 | Wine grape | cytosol | 21.22 | 71.0 |
| TraesCS1B01G363000.1 | Wheat | cytosol | 70.32 | 70.46 |
| TraesCS1D01G351400.1 | Wheat | cytosol, endoplasmic reticulum | 69.92 | 70.06 |
| PGSC0003DMT400024306 | Potato | cytosol | 14.94 | 16.74 |
| PGSC0003DMT400056260 | Potato | cytosol | 1.1 | 6.11 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:102586542 | MapMan:19.2.6.2.2.2 | InterPro:26S_Psome_Rpn2 | InterPro:ARM-like | InterPro:ARM-type_fold |
| ncoils:Coil | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008540 | GO:GO:0009056 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0042176 | GO:GO:0050790 | InterPro:IPR011989 |
| UniProt:M1CWD8 | PFAM:PF01851 | PFAM:PF13646 | EnsemblPlantsGene:PGSC0003DMG400029633 | PGSC:PGSC0003DMG400029633 | EnsemblPlants:PGSC0003DMT400076219 |
| PIRSF:PIRSF015947 | PANTHER:PTHR10943 | PANTHER:PTHR10943:SF10 | InterPro:Proteasome/cyclosome_rpt | SUPFAM:SSF48371 | TMHMM:TMhelix |
| UniParc:UPI0002949430 | RefSeq:XP_006360355.1 | SEG:seg | : | : | : |
Description
26S proteasome subunit RPN2a [Source:PGSC_GENE;Acc:PGSC0003DMG400029633]
Coordinates
chr9:+:58662483..58672330
Molecular Weight (calculated)
109097.0 Da
IEP (calculated)
4.991
GRAVY (calculated)
-0.133
Length
1004 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVTAATMVSS AGGLLAMLNE SHPQLKLHAL SNLNTFVDYF WPEISTSVPV IESLYEDEEF DQRQLAALVA SKVFYHLGEH NVSLSYALGA GPLFDVSEDS
0101: DYVHTVLAKA LDEYASYKIK AAESSDEATK VDPRLEAIVE RMLDKCIKDG KYQQAIGMAI ECRRLDKVAE AIVRSDNVDA TLAYCSNVSH NFVNRREYRS
0201: EVLRLLVEVY EKSPSPNYLS MCQWLMFLDK PEDVASILEK LLRSENKDDA LLAFQIAFDL VENEHQAFLL RVRDRLSSPN LQPSDTVQSL PADSDRAATE
0301: DEEASEDVPL LEESRPLGGT LTAADPKEVI YAERLGKLKG ILSGENSIQL TLQFLYSHNK SDLLILKTIK QSVEMRNSVC HSATIYANAI MHAGTTVDTF
0401: LRENLDWLSR ATNWAKFSAT AGLGVIHSGH LQQGRSLMAP YLPQGGGGGG GSPYSEGGAL YALGLIHANH GEGIKQFLRE SLRSTNVEVI QHGACLGLGL
0501: AALGTADEDI YDDIKNVLYT DSAVAGEAAG IGMGLLMVGT ASEKASEMLA YAHETQHEKI IRGLALGIAL TVYGREEEAD TLIEQMTRDQ DPILRYGGMY
0601: ALALAYRGTA NNKAIRQLLH FAVSDVSDDV RRTAVLALGF VMYSEPEQMP RIVSLLSKSY NPHVRYGAAM AVGISCAGTG LSEAISLLEP LTSDVVDFVR
0701: QGALIAMAMV MVQISEASDS RVGAFRRQLE KIVLDKHEDT MSKMGAILAS GILDAGGRNV TIKLLSKTKH DKITAVVGLA VFSQFWYWYP LIYFVSLAFS
0801: PTALIGLNSD LKVPKFDFVS HAKPSLFEYP KPITVTTTTS AVKLPTAVLS TSARAKARAS KKEAEKANVE KAAEESSSGA TNLGKGKSTD KDGDSMQVDA
0901: PAEKKNEPEP SFEILTNPAR VVPAQEKFIK FLEDSRYVPV KSSPSGFVLL RDLRPDEPEV LSLTDAPSST ASSTGGGSTG QQAPASAMAV DEEPHPPPAF
1001: EYTS
0101: DYVHTVLAKA LDEYASYKIK AAESSDEATK VDPRLEAIVE RMLDKCIKDG KYQQAIGMAI ECRRLDKVAE AIVRSDNVDA TLAYCSNVSH NFVNRREYRS
0201: EVLRLLVEVY EKSPSPNYLS MCQWLMFLDK PEDVASILEK LLRSENKDDA LLAFQIAFDL VENEHQAFLL RVRDRLSSPN LQPSDTVQSL PADSDRAATE
0301: DEEASEDVPL LEESRPLGGT LTAADPKEVI YAERLGKLKG ILSGENSIQL TLQFLYSHNK SDLLILKTIK QSVEMRNSVC HSATIYANAI MHAGTTVDTF
0401: LRENLDWLSR ATNWAKFSAT AGLGVIHSGH LQQGRSLMAP YLPQGGGGGG GSPYSEGGAL YALGLIHANH GEGIKQFLRE SLRSTNVEVI QHGACLGLGL
0501: AALGTADEDI YDDIKNVLYT DSAVAGEAAG IGMGLLMVGT ASEKASEMLA YAHETQHEKI IRGLALGIAL TVYGREEEAD TLIEQMTRDQ DPILRYGGMY
0601: ALALAYRGTA NNKAIRQLLH FAVSDVSDDV RRTAVLALGF VMYSEPEQMP RIVSLLSKSY NPHVRYGAAM AVGISCAGTG LSEAISLLEP LTSDVVDFVR
0701: QGALIAMAMV MVQISEASDS RVGAFRRQLE KIVLDKHEDT MSKMGAILAS GILDAGGRNV TIKLLSKTKH DKITAVVGLA VFSQFWYWYP LIYFVSLAFS
0801: PTALIGLNSD LKVPKFDFVS HAKPSLFEYP KPITVTTTTS AVKLPTAVLS TSARAKARAS KKEAEKANVE KAAEESSSGA TNLGKGKSTD KDGDSMQVDA
0901: PAEKKNEPEP SFEILTNPAR VVPAQEKFIK FLEDSRYVPV KSSPSGFVLL RDLRPDEPEV LSLTDAPSST ASSTGGGSTG QQAPASAMAV DEEPHPPPAF
1001: EYTS
0001: MATPMVSSAG GLLAMLNEPH PVLKLHALSN LNNLVDQFWP EISTSVPIIE SLYEDEEFDL HQRQLAALLV SKVFYYLGEL NDSLSYALGA GPLFDVSEDS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
Arabidopsis Description
RPN2A26S proteasome non-ATPase regulatory subunit 1 homolog A [Source:UniProtKB/Swiss-Prot;Acc:O48844]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.