Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 2
- golgi 2
- plasma membrane 3
- endoplasmic reticulum 3
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G430100.2 | Wheat | golgi | 99.71 | 98.85 |
| TraesCS2B01G450800.2 | Wheat | cytosol, endoplasmic reticulum | 98.45 | 98.54 |
| Os04t0608500-01 | Rice | plasma membrane | 27.26 | 91.23 |
| KXG27072 | Sorghum | plasma membrane | 87.1 | 89.09 |
| Zm00001d026265_P002 | Maize | plasma membrane | 86.32 | 87.08 |
| TraesCS1D01G351400.1 | Wheat | cytosol, endoplasmic reticulum | 82.15 | 84.53 |
| Zm00001d002373_P006 | Maize | cytosol, plasma membrane | 81.38 | 83.23 |
| GSMUA_Achr1P10550_001 | Banana | cytosol | 76.43 | 77.94 |
| VIT_00s0215g00040.t01 | Wine grape | extracellular | 46.94 | 75.62 |
| VIT_10s0042g00800.t01 | Wine grape | cytosol, plastid | 73.71 | 75.62 |
| AT2G32730.1 | Thale cress | cytosol | 72.94 | 74.9 |
| CDX79472 | Canola | cytosol, plastid | 72.45 | 74.77 |
| KRH60454 | Soybean | endoplasmic reticulum | 72.74 | 74.55 |
| KRH41754 | Soybean | nucleus | 72.65 | 74.45 |
| Bra022899.1-P | Field mustard | cytosol, plastid | 72.45 | 74.4 |
| CDY12178 | Canola | cytosol | 71.58 | 74.4 |
| CDX84724 | Canola | cytosol, plastid | 72.45 | 74.33 |
| CDY19162 | Canola | extracellular | 72.16 | 74.1 |
| Bra021810.1-P | Field mustard | cytosol, plastid | 72.07 | 74.0 |
| CDY23791 | Canola | cytosol, plastid | 72.16 | 73.81 |
| Bra005560.1-P | Field mustard | plastid | 71.97 | 73.61 |
| PGSC0003DMT400076219 | Potato | endoplasmic reticulum | 71.29 | 73.21 |
| PGSC0003DMT400040763 | Potato | cytosol | 70.42 | 73.11 |
| CDY60623 | Canola | endoplasmic reticulum, golgi | 68.57 | 72.96 |
| AT1G04810.1 | Thale cress | cytosol | 70.81 | 72.93 |
| Solyc09g091750.2.1 | Tomato | plastid | 71.0 | 72.91 |
| Solyc05g053650.2.1 | Tomato | endoplasmic reticulum | 70.13 | 72.81 |
| VIT_00s0125g00350.t01 | Wine grape | cytosol | 12.8 | 71.35 |
| VIT_00s0215g00050.t01 | Wine grape | cytosol | 18.62 | 64.0 |
| TraesCS7D01G413900.1 | Wheat | mitochondrion | 13.09 | 16.25 |
| TraesCS6D01G105500.1 | Wheat | golgi | 13.39 | 15.42 |
| TraesCS7D01G413800.1 | Wheat | cytosol | 9.21 | 15.32 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.6.2.2.2 | InterPro:26S_Psome_Rpn2 | InterPro:ARM-like | InterPro:ARM-type_fold | ncoils:Coil |
| GO:GO:0000502 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0042176 |
| InterPro:IPR011989 | PFAM:PF01851 | PFAM:PF13646 | PIRSF:PIRSF015947 | PANTHER:PTHR10943 | PANTHER:PTHR10943:SF10 |
| InterPro:Proteasome/cyclosome_rpt | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS2D01G427700 | EnsemblPlants:TraesCS2D01G427700.2 | SEG:seg | : |
Description
No Description!
Coordinates
chr2D:+:539870290..539876012
Molecular Weight (calculated)
111113.0 Da
IEP (calculated)
4.811
GRAVY (calculated)
-0.133
Length
1031 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAVATVSSA GGILAMLHEP AEELKLHALA SLNSVVHLFY PEISTSIPTI ESLYEDEEFD QRQLAALVVS KVFYYLGELN DALLYALGAG PLFDVSEDSD
0101: YAHALLAKAL DEYASFKTRA SKATEEEENV DPRLEAIVER MLEKCVLDGK YQQAMGMAVE CRRLDKLEEA IVRCDNIHGA LSYCINLSHQ YVLRCLVKIY
0201: QTLPHPDFLS ICQCLMFLGE PETVANILDT LISGSKDDAL LAYQIAFDLV ENENQAFLLN VRNRLDSQTP GQSNPDSGSA LPVDQTVNAG TTSTEPAGDV
0301: QMGDDTTTAN GNAHPVDPNE AAHADKLAKL KGILSGEKSI QLTLQFLYSH NRSDLLILKT IKQAVEMRNS VCHSATICSN AIMHAGTTVD TFLRENLEWL
0401: SRATNWAKFS ATAGLGVIHR GHLQQGRALM APYLPQSGAV GGGSPYSEGG ALYALGLIHA NHGEGIKQFL RESLRNTSAE VIQHGACLGL GLASLGTADE
0501: EVFEDIKNVL YTDSAVAGEA AGIGMGLLMV GTASEKAAEM LAYAHDTQHE KIIRGLALGI ALTVYGREEE ADTLIEQMTR DQDPILRYGG MYALALAYRG
0601: TANNKAIHQL LHFAVSDVSD DVRRTAVMGL GFVLYNEPEQ TPRIVSLLSE SYNPHVRYGA ALAVGISCAG TGLSDAISLL EPLTSDVVDF VRQGALIAMA
0701: MVMIQTNESF DSRVGTFRRQ LEKIILDKHE DTMSKMGAIL ASGILDAGGR NVTIKLLSRN KHDKLTAVIG LAVFTQFWYW YPLLYFISLA FSPTAIIGLN
0801: SNLEVPKFEF LSHAKPSLFE YPKPTTQQTT TSAVKLPTAI LSTYAKAKSR AKKDAESKAA NQEKTAEAES KANQEKSTAE SKPSQEKSTD AESKAKTTED
0901: ASGSTSGEAA KTQEKDGDAM QVDGAAEKKA PEPEPAFQIL ANPARVVPAQ EKFIKFIEGS RYVPVRPAPC GFILLRDTQP SEAEELVLTD APATVATGAG
1001: NNAAAAAAGQ GSAAMAVDDE PQPPQPFEYS A
0101: YAHALLAKAL DEYASFKTRA SKATEEEENV DPRLEAIVER MLEKCVLDGK YQQAMGMAVE CRRLDKLEEA IVRCDNIHGA LSYCINLSHQ YVLRCLVKIY
0201: QTLPHPDFLS ICQCLMFLGE PETVANILDT LISGSKDDAL LAYQIAFDLV ENENQAFLLN VRNRLDSQTP GQSNPDSGSA LPVDQTVNAG TTSTEPAGDV
0301: QMGDDTTTAN GNAHPVDPNE AAHADKLAKL KGILSGEKSI QLTLQFLYSH NRSDLLILKT IKQAVEMRNS VCHSATICSN AIMHAGTTVD TFLRENLEWL
0401: SRATNWAKFS ATAGLGVIHR GHLQQGRALM APYLPQSGAV GGGSPYSEGG ALYALGLIHA NHGEGIKQFL RESLRNTSAE VIQHGACLGL GLASLGTADE
0501: EVFEDIKNVL YTDSAVAGEA AGIGMGLLMV GTASEKAAEM LAYAHDTQHE KIIRGLALGI ALTVYGREEE ADTLIEQMTR DQDPILRYGG MYALALAYRG
0601: TANNKAIHQL LHFAVSDVSD DVRRTAVMGL GFVLYNEPEQ TPRIVSLLSE SYNPHVRYGA ALAVGISCAG TGLSDAISLL EPLTSDVVDF VRQGALIAMA
0701: MVMIQTNESF DSRVGTFRRQ LEKIILDKHE DTMSKMGAIL ASGILDAGGR NVTIKLLSRN KHDKLTAVIG LAVFTQFWYW YPLLYFISLA FSPTAIIGLN
0801: SNLEVPKFEF LSHAKPSLFE YPKPTTQQTT TSAVKLPTAI LSTYAKAKSR AKKDAESKAA NQEKTAEAES KANQEKSTAE SKPSQEKSTD AESKAKTTED
0901: ASGSTSGEAA KTQEKDGDAM QVDGAAEKKA PEPEPAFQIL ANPARVVPAQ EKFIKFIEGS RYVPVRPAPC GFILLRDTQP SEAEELVLTD APATVATGAG
1001: NNAAAAAAGQ GSAAMAVDDE PQPPQPFEYS A
0001: MATPMVSSAG GLLAMLNEPH PVLKLHALSN LNNLVDQFWP EISTSVPIIE SLYEDEEFDL HQRQLAALLV SKVFYYLGEL NDSLSYALGA GPLFDVSEDS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
Arabidopsis Description
RPN2A26S proteasome non-ATPase regulatory subunit 1 homolog A [Source:UniProtKB/Swiss-Prot;Acc:O48844]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.