Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G32730.1 | Thale cress | cytosol | 91.31 | 91.04 |
| KRH60454 | Soybean | endoplasmic reticulum | 82.92 | 82.5 |
| KRH41754 | Soybean | nucleus | 82.82 | 82.41 |
| PGSC0003DMT400040763 | Potato | cytosol | 79.12 | 79.76 |
| Solyc05g053650.2.1 | Tomato | endoplasmic reticulum | 78.92 | 79.56 |
| PGSC0003DMT400076219 | Potato | endoplasmic reticulum | 79.42 | 79.18 |
| Solyc09g091750.2.1 | Tomato | plastid | 79.42 | 79.18 |
| GSMUA_Achr1P10550_001 | Banana | cytosol | 77.52 | 76.76 |
| KXG27072 | Sorghum | plasma membrane | 75.92 | 75.4 |
| Zm00001d026265_P002 | Maize | plasma membrane | 75.72 | 74.17 |
| Os08t0224700-01 | Rice | plasma membrane | 73.03 | 74.06 |
| Os04t0608500-01 | Rice | plasma membrane | 22.78 | 74.03 |
| EES13543 | Sorghum | endoplasmic reticulum | 72.33 | 73.28 |
| Zm00001d049357_P001 | Maize | plasma membrane | 72.23 | 73.18 |
| Zm00001d024342_P001 | Maize | plasma membrane | 72.33 | 73.06 |
| Zm00001d002373_P006 | Maize | cytosol, plasma membrane | 73.13 | 72.62 |
| HORVU1Hr1G081810.8 | Barley | cytosol, plasma membrane | 68.33 | 71.55 |
| VIT_00s0125g00350.t01 | Wine grape | cytosol | 13.19 | 71.35 |
| TraesCS1A01G348400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 67.03 | 71.31 |
| TraesCS2A01G430100.2 | Wheat | golgi | 73.63 | 70.87 |
| TraesCS2D01G427700.2 | Wheat | endoplasmic reticulum, plasma membrane | 72.93 | 70.81 |
| TraesCS2B01G450800.2 | Wheat | cytosol, endoplasmic reticulum | 72.53 | 70.49 |
| TraesCS1B01G363000.1 | Wheat | cytosol | 70.13 | 70.06 |
| TraesCS1D01G351400.1 | Wheat | cytosol, endoplasmic reticulum | 69.73 | 69.66 |
| AT2G20580.1 | Thale cress | cytosol | 14.49 | 16.27 |
| AT4G28470.1 | Thale cress | cytosol | 14.19 | 15.94 |
| AT4G08140.1 | Thale cress | cytosol | 1.1 | 13.1 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.6.2.2.2 | InterPro:26S_Psome_Rpn2 | EntrezGene:839409 | UniProt:A0A178WEG0 | ProteinID:AAF40455.1 |
| ProteinID:AEE27746.1 | InterPro:ARM-like | InterPro:ARM-type_fold | ArrayExpress:AT1G04810 | EnsemblPlantsGene:AT1G04810 | RefSeq:AT1G04810 |
| TAIR:AT1G04810 | RefSeq:AT1G04810-TAIR-G | EnsemblPlants:AT1G04810.1 | TAIR:AT1G04810.1 | EMBL:AY242527 | Unigene:At.19689 |
| EMBL:BT004007 | ncoils:Coil | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004175 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008540 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030163 |
| GO:GO:0030234 | GO:GO:0034515 | GO:GO:0042176 | GO:GO:0043161 | GO:GO:0050790 | InterPro:IPR011989 |
| RefSeq:NP_171973.1 | ProteinID:OAP16799.1 | PFAM:PF01851 | PFAM:PF13646 | PIRSF:PIRSF015947 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR10943 | PANTHER:PTHR10943:SF10 | InterPro:Proteasome/cyclosome_rpt | UniProt:Q9MAT0 | SUPFAM:SSF48371 | TMHMM:TMhelix |
| UniParc:UPI000000C22E | SEG:seg | : | : | : | : |
Description
RPN2B26S proteasome non-ATPase regulatory subunit 1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAT0]
Coordinates
chr1:+:1350080..1355466
Molecular Weight (calculated)
108872.0 Da
IEP (calculated)
5.004
GRAVY (calculated)
-0.058
Length
1001 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAAMVSSAG GLLAMLNEPH PSLKLHALSY LIRLVDQFWP EISTSVPIIE SLYEDEEFDQ HQRQLAALLA SKVFYYLGEL NDSLSYALGA GSLFDVSEDS
0101: DYIHTLLSKA IDEYAILRSK AVESSEVVEI DPRLVAIVER MLDKCITDGK YQQAMGIAIE CRRLDKLEEA IIKSENVQGT LSYCINVSHS FVNQREYRHE
0201: VLRLLVNVYQ KLASPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LAFQISFDLV QNEHQAFLMS VRDRLPAPKT RPVEAIQAVE TSTAQNENTA
0301: GDVQMADETP SQTIVHETDP VDAVYAERLT KAKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTS VEVIQHGACL GLGLAALGTA
0501: DEDIYDDIKS VLYTDSAVAG EAAGISMGLL LVGTATDKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGAFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLTVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVA TANTAAKLPT AVLSTSAKAK AKAKKEAEQK AKAENSGNEA GKANAASDEK EAESMQVDST ATTVEKKVEP
0901: EATFEILVNP ARVVPSQEKY IKLMEDSRYV PMKLAPSGFV LLRDLRPHEP EVLSLTDAPT STASPAVGAE AAGQAQQAAT TSAMAIDDEP QPPQAFEYAS
1001: P
0101: DYIHTLLSKA IDEYAILRSK AVESSEVVEI DPRLVAIVER MLDKCITDGK YQQAMGIAIE CRRLDKLEEA IIKSENVQGT LSYCINVSHS FVNQREYRHE
0201: VLRLLVNVYQ KLASPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LAFQISFDLV QNEHQAFLMS VRDRLPAPKT RPVEAIQAVE TSTAQNENTA
0301: GDVQMADETP SQTIVHETDP VDAVYAERLT KAKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTS VEVIQHGACL GLGLAALGTA
0501: DEDIYDDIKS VLYTDSAVAG EAAGISMGLL LVGTATDKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGAFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLTVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVA TANTAAKLPT AVLSTSAKAK AKAKKEAEQK AKAENSGNEA GKANAASDEK EAESMQVDST ATTVEKKVEP
0901: EATFEILVNP ARVVPSQEKY IKLMEDSRYV PMKLAPSGFV LLRDLRPHEP EVLSLTDAPT STASPAVGAE AAGQAQQAAT TSAMAIDDEP QPPQAFEYAS
1001: P
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.