Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0042g00800.t01 | Wine grape | cytosol, plastid | 80.51 | 81.0 |
| KXG27072 | Sorghum | plasma membrane | 80.61 | 80.85 |
| VIT_00s0215g00040.t01 | Wine grape | extracellular | 50.64 | 80.0 |
| CDY12178 | Canola | cytosol | 78.14 | 79.64 |
| CDX79472 | Canola | cytosol, plastid | 78.54 | 79.48 |
| AT2G32730.1 | Thale cress | cytosol | 78.83 | 79.38 |
| Zm00001d026265_P002 | Maize | plasma membrane | 80.22 | 79.35 |
| KRH60454 | Soybean | endoplasmic reticulum | 78.93 | 79.32 |
| KRH41754 | Soybean | nucleus | 78.93 | 79.32 |
| Bra022899.1-P | Field mustard | cytosol, plastid | 78.73 | 79.28 |
| CDX84724 | Canola | cytosol, plastid | 78.73 | 79.2 |
| CDY19162 | Canola | extracellular | 78.44 | 78.98 |
| Bra005560.1-P | Field mustard | plastid | 78.73 | 78.97 |
| Bra021810.1-P | Field mustard | cytosol, plastid | 78.34 | 78.88 |
| CDY23791 | Canola | cytosol, plastid | 78.54 | 78.77 |
| Os04t0608500-01 | Rice | plasma membrane | 23.94 | 78.57 |
| CDY60623 | Canola | endoplasmic reticulum, golgi | 74.98 | 78.22 |
| AT1G04810.1 | Thale cress | cytosol | 76.76 | 77.52 |
| Os08t0224700-01 | Rice | plasma membrane | 75.67 | 77.51 |
| PGSC0003DMT400076219 | Potato | endoplasmic reticulum | 76.85 | 77.39 |
| Solyc09g091750.2.1 | Tomato | plastid | 76.76 | 77.29 |
| PGSC0003DMT400040763 | Potato | cytosol | 75.47 | 76.84 |
| Solyc05g053650.2.1 | Tomato | endoplasmic reticulum | 75.27 | 76.64 |
| Zm00001d002373_P006 | Maize | cytosol, plasma membrane | 76.36 | 76.59 |
| TraesCS2A01G430100.2 | Wheat | golgi | 78.64 | 76.44 |
| TraesCS2D01G427700.2 | Wheat | endoplasmic reticulum, plasma membrane | 77.94 | 76.43 |
| TraesCS2B01G450800.2 | Wheat | cytosol, endoplasmic reticulum | 77.74 | 76.31 |
| Zm00001d049357_P001 | Maize | plasma membrane | 74.28 | 76.01 |
| HORVU1Hr1G081810.8 | Barley | cytosol, plasma membrane | 71.41 | 75.52 |
| Zm00001d024342_P001 | Maize | plasma membrane | 73.79 | 75.28 |
| TraesCS1A01G348400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 69.73 | 74.92 |
| EES13543 | Sorghum | endoplasmic reticulum | 73.1 | 74.8 |
| TraesCS1B01G363000.1 | Wheat | cytosol | 72.7 | 73.35 |
| TraesCS1D01G351400.1 | Wheat | cytosol, endoplasmic reticulum | 72.4 | 73.05 |
| VIT_00s0125g00350.t01 | Wine grape | cytosol | 13.16 | 71.89 |
| VIT_00s0215g00050.t01 | Wine grape | cytosol | 20.47 | 69.0 |
| GSMUA_Achr1P10570_001 | Banana | extracellular | 7.52 | 51.01 |
| GSMUA_Achr11P... | Banana | cytosol | 14.14 | 16.1 |
| GSMUA_Achr1P10580_001 | Banana | cytosol, nucleus, plasma membrane | 1.78 | 12.41 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.6.2.2.2 | InterPro:26S_Psome_Rpn2 | InterPro:ARM-like | InterPro:ARM-type_fold | ncoils:Coil |
| GO:GO:0000502 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008540 | GO:GO:0009056 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0019538 | GO:GO:0030234 | GO:GO:0042176 | GO:GO:0050790 | EnsemblPlantsGene:GSMUA_Achr1G10550_001 | EnsemblPlants:GSMUA_Achr1P10550_001 |
| EnsemblPlants:GSMUA_Achr1T10550_001 | InterPro:IPR011989 | UniProt:M0RYR4 | PFAM:PF01851 | PFAM:PF13646 | PIRSF:PIRSF015947 |
| PANTHER:PTHR10943 | PANTHER:PTHR10943:SF10 | InterPro:Proteasome/cyclosome_rpt | SUPFAM:SSF48371 | TMHMM:TMhelix | UniParc:UPI000295DF25 |
| SEG:seg | : | : | : | : | : |
Description
26S proteasome non-ATPase regulatory subunit 1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G10550_001]
Coordinates
chr1:-:7958270..7965672
Molecular Weight (calculated)
109670.0 Da
IEP (calculated)
5.170
GRAVY (calculated)
-0.135
Length
1011 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAVVSSASGL IAMLHEPHPA LKLHALDKLN SLVHLFWPEI STSVPTIESL YEDEEFDQRQ LAALVVSKVF YYLGELNDSL SYALGAGPLF DVSEDTDYAH
0101: TLLAKALDEY ASLRSKAAKS SEEESKMDPR LEAIVERMLD KCILDGKYQQ AMGMAIECRR LDKLEEAITH SDNVHGALSY CITLSHSFVN HREYRCEVLR
0201: LLVKIYQRLP SPDYLSICQC LMFLNEPDTV ATILEKLLSG SKDDALLAFQ IAFDLEENEH QAFLLNLKSR LAGSKSQAVD HVNPEQGSSA PTSENGNATA
0301: DNAVAASEDV HMTEESHTAN GTSQDINQTD GAYNERLAKI KGILSGETSI QLTLQFLYSH NRSDLLILKT IKQSVEMRNS VCHSATICAN AIMHAGTTVD
0401: TFLRENLEWL SRATNWAKFS ATAGLGVIHG GHLQQGRSLM APYLPQTGAV GGGSPYSEGG ALYALGLIHA NHGEGIKQFL RESLRNTNAE VIQHGACLGL
0501: GLAALGTADE VIFEDVKNVL YTDSAVAGEA AGISMGLLMV GTASEKATEM LAYAHDTQHE KIIRGLALGI ALTVYGREEQ ADTLIEQMTR DQDPIIRYGG
0601: MYALALGYRG TSNNKAIHQL LHFAVSDVSD DVRRTAVLAL GFVLYSEPEQ TPRIVSLLSE SYNPHVRYGA ALAVGISCAG TGLSDAISLL EPLTSDVVDF
0701: VRQGALIAMA MVMIQTNESC DSRVGTFRRQ LEKIILDKHE DTMSKMGAIL ASGILDAGGR NVTIKLLSKT KHDKITAVVG LAVFSQFWYW YPLLYFISLA
0801: FSPTAFIGLN YDLKVPKFEF LSNAKPSLFE YPRPTAPPTS TSAIKMPTAV LSTAAKAKSK AKKDAEHKAA LEKPSSDDTS SGSTSGKTNK SSEKDTDAMQ
0901: VDSASEKKVE PEPSYEVLTN PARVVPAQEK YIRFLEESRY VPVKLAPSGF VLLKDLQPTE VEVLTLSDAP TTLPSNVGGA ATATTGQQGS GSSAMAVDEE
1001: PQPPQPFEYS G
0101: TLLAKALDEY ASLRSKAAKS SEEESKMDPR LEAIVERMLD KCILDGKYQQ AMGMAIECRR LDKLEEAITH SDNVHGALSY CITLSHSFVN HREYRCEVLR
0201: LLVKIYQRLP SPDYLSICQC LMFLNEPDTV ATILEKLLSG SKDDALLAFQ IAFDLEENEH QAFLLNLKSR LAGSKSQAVD HVNPEQGSSA PTSENGNATA
0301: DNAVAASEDV HMTEESHTAN GTSQDINQTD GAYNERLAKI KGILSGETSI QLTLQFLYSH NRSDLLILKT IKQSVEMRNS VCHSATICAN AIMHAGTTVD
0401: TFLRENLEWL SRATNWAKFS ATAGLGVIHG GHLQQGRSLM APYLPQTGAV GGGSPYSEGG ALYALGLIHA NHGEGIKQFL RESLRNTNAE VIQHGACLGL
0501: GLAALGTADE VIFEDVKNVL YTDSAVAGEA AGISMGLLMV GTASEKATEM LAYAHDTQHE KIIRGLALGI ALTVYGREEQ ADTLIEQMTR DQDPIIRYGG
0601: MYALALGYRG TSNNKAIHQL LHFAVSDVSD DVRRTAVLAL GFVLYSEPEQ TPRIVSLLSE SYNPHVRYGA ALAVGISCAG TGLSDAISLL EPLTSDVVDF
0701: VRQGALIAMA MVMIQTNESC DSRVGTFRRQ LEKIILDKHE DTMSKMGAIL ASGILDAGGR NVTIKLLSKT KHDKITAVVG LAVFSQFWYW YPLLYFISLA
0801: FSPTAFIGLN YDLKVPKFEF LSNAKPSLFE YPRPTAPPTS TSAIKMPTAV LSTAAKAKSK AKKDAEHKAA LEKPSSDDTS SGSTSGKTNK SSEKDTDAMQ
0901: VDSASEKKVE PEPSYEVLTN PARVVPAQEK YIRFLEESRY VPVKLAPSGF VLLKDLQPTE VEVLTLSDAP TTLPSNVGGA ATATTGQQGS GSSAMAVDEE
1001: PQPPQPFEYS G
0001: MATPMVSSAG GLLAMLNEPH PVLKLHALSN LNNLVDQFWP EISTSVPIIE SLYEDEEFDL HQRQLAALLV SKVFYYLGEL NDSLSYALGA GPLFDVSEDS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
Arabidopsis Description
RPN2A26S proteasome non-ATPase regulatory subunit 1 homolog A [Source:UniProtKB/Swiss-Prot;Acc:O48844]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.