Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- plastid 4
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0215g00040.t01 | Wine grape | extracellular | 60.9 | 95.62 |
| PGSC0003DMT400076219 | Potato | endoplasmic reticulum | 85.37 | 85.46 |
| Solyc09g091750.2.1 | Tomato | plastid | 85.37 | 85.46 |
| PGSC0003DMT400040763 | Potato | cytosol | 83.88 | 84.89 |
| Solyc05g053650.2.1 | Tomato | endoplasmic reticulum | 83.28 | 84.29 |
| VIT_00s0215g00050.t01 | Wine grape | cytosol | 24.58 | 82.33 |
| GSMUA_Achr1P10550_001 | Banana | cytosol | 81.0 | 80.51 |
| KXG27072 | Sorghum | plasma membrane | 78.51 | 78.27 |
| Os04t0608500-01 | Rice | plasma membrane | 23.88 | 77.92 |
| Zm00001d026265_P002 | Maize | plasma membrane | 78.01 | 76.71 |
| Zm00001d049357_P001 | Maize | plasma membrane | 75.22 | 76.52 |
| Os08t0224700-01 | Rice | plasma membrane | 75.12 | 76.49 |
| EES13543 | Sorghum | endoplasmic reticulum | 74.43 | 75.71 |
| Zm00001d024342_P001 | Maize | plasma membrane | 74.53 | 75.58 |
| Zm00001d002373_P006 | Maize | cytosol, plasma membrane | 75.32 | 75.1 |
| VIT_00s0125g00350.t01 | Wine grape | cytosol | 13.73 | 74.59 |
| HORVU1Hr1G081810.8 | Barley | cytosol, plasma membrane | 70.95 | 74.58 |
| TraesCS1A01G348400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 69.55 | 74.28 |
| TraesCS2A01G430100.2 | Wheat | golgi | 76.32 | 73.75 |
| TraesCS2D01G427700.2 | Wheat | endoplasmic reticulum, plasma membrane | 75.62 | 73.71 |
| TraesCS2B01G450800.2 | Wheat | cytosol, endoplasmic reticulum | 75.02 | 73.2 |
| TraesCS1B01G363000.1 | Wheat | cytosol | 72.54 | 72.75 |
| TraesCS1D01G351400.1 | Wheat | cytosol, endoplasmic reticulum | 72.14 | 72.36 |
| VIT_00s0125g00380.t01 | Wine grape | cytosol | 2.99 | 71.43 |
| VIT_03s0038g02720.t01 | Wine grape | cytosol | 6.07 | 45.86 |
| VIT_00s0125g00320.t01 | Wine grape | mitochondrion, plasma membrane | 3.88 | 41.49 |
| VIT_12s0028g03130.t01 | Wine grape | cytosol | 15.32 | 17.3 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:100264792 | wikigene:100264792 | MapMan:19.2.6.2.2.2 | InterPro:26S_Psome_Rpn2 | EMBL:AM453244 |
| InterPro:ARM-like | InterPro:ARM-type_fold | ProteinID:CAN83057 | ProteinID:CAN83057.1 | ProteinID:CBI29040 | ProteinID:CBI29040.3 |
| ncoils:Coil | UniProt:D7TEW7 | EMBL:FN595766 | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004175 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008540 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0034515 | GO:GO:0042176 |
| GO:GO:0043161 | GO:GO:0050790 | InterPro:IPR011989 | EntrezGene:LOC100264792 | wikigene:LOC100264792 | PFAM:PF01851 |
| PFAM:PF13646 | PIRSF:PIRSF015947 | PANTHER:PTHR10943 | PANTHER:PTHR10943:SF10 | InterPro:Proteasome/cyclosome_rpt | SUPFAM:SSF48371 |
| UniParc:UPI00015CB710 | ArrayExpress:VIT_10s0042g00800 | EnsemblPlantsGene:VIT_10s0042g00800 | EnsemblPlants:VIT_10s0042g00800.t01 | unigene:Vvi.4927 | RefSeq:XP_002270542 |
| RefSeq:XP_002270542.1 | SEG:seg | : | : | : | : |
Description
26S proteasome non-ATPase regulatory subunit 1 homolog [Source:UniProtKB/TrEMBL;Acc:D7TEW7]
Coordinates
chr10:+:14100862..14109083
Molecular Weight (calculated)
109563.0 Da
IEP (calculated)
4.913
GRAVY (calculated)
-0.151
Length
1005 amino acids
Sequence
(BLAST)
(BLAST)
0001: MATMVSSAGG LLAMLNESHP MLKFHALSNL NIFVDYFWPE ISTSVPIIES LYEDEEFDQR QRQLAALLVS KVFYYLGELN DSLSYALGAG PLFDVSEDSD
0101: YVHTLLAKAI DEYASLKSRA GESNDEALVD PRLEAIVERM LDKCIVDGRY QQAMGMAVEC RRLDKLEEAI TRSDNVHGTL SYCINISHSF VNRREYRREV
0201: LRCLVKVYQK LPSPDYLSIC QCLMFLDEPE GVASILEKLL RSENKDDALL AFQIAFDLVE NEHQAFLLNV RDRLSNPKSQ PSESVQPGNN DPDTAQNGNP
0301: GASEDVEMTD GSHASTGSLL EMDPNEALYA ERLTKIKGIL SGETSIQLTL QFLYSHNKSD LLILKTIKQS VEMRNSVCHS ATIYANAIMH AGTTVDTFLR
0401: ENLDWLSRAT NWAKFSATAG LGVIHRGHLQ QGRSLMAPYL PQSGAGGGGS PYSEGGALYA LGLIHANHGE GIKQFLRDSL RSTNVEVIQH GACLGLGLAA
0501: LGTADEDIYD DIKNVLYTDS AVAGEAAGIS MGLLMVGTAS EKASEMLAYA HETQHEKIIR GLALGIALTV YGREEEADTL IEQMTRDQDP ILRYGGMYAL
0601: ALAYQGTANN KAIRQLLHFA VSDVSDDVRR TAVLALGFVL YSEPEQTPRI VSLLSESYNP HVRYGAALAV GISCAGTGLS EAISLLEPLT SDVVDFVRQG
0701: ALIAMAMVMV QISETSDSRV GTFRRQLEKI ILDKHEDTMS KMGAILASGI LDAGGRNVTI RLLSKTKHDK VTAVVGLAVF SQFWYWYPLI YFISLSFSPT
0801: AFIGLNYDLK VPTFEFLSHA KPSLFEYPRP TTVPTATSTV KLPTAVLSTS AKAKARAKKE AEQKVNAEKS AGTESSSSTG QSSGKGKSTT EKDGDSMQVD
0901: SPSEKKVEPE ASFEILTNPA RVVPAQEKFI KFLEESRYVP VKLAPSGFVL LRDLRPTEPE VLSLTDTPSS TASPAGGSAT GQQAAASAMA VDEEPQPPQA
1001: FEYTS
0101: YVHTLLAKAI DEYASLKSRA GESNDEALVD PRLEAIVERM LDKCIVDGRY QQAMGMAVEC RRLDKLEEAI TRSDNVHGTL SYCINISHSF VNRREYRREV
0201: LRCLVKVYQK LPSPDYLSIC QCLMFLDEPE GVASILEKLL RSENKDDALL AFQIAFDLVE NEHQAFLLNV RDRLSNPKSQ PSESVQPGNN DPDTAQNGNP
0301: GASEDVEMTD GSHASTGSLL EMDPNEALYA ERLTKIKGIL SGETSIQLTL QFLYSHNKSD LLILKTIKQS VEMRNSVCHS ATIYANAIMH AGTTVDTFLR
0401: ENLDWLSRAT NWAKFSATAG LGVIHRGHLQ QGRSLMAPYL PQSGAGGGGS PYSEGGALYA LGLIHANHGE GIKQFLRDSL RSTNVEVIQH GACLGLGLAA
0501: LGTADEDIYD DIKNVLYTDS AVAGEAAGIS MGLLMVGTAS EKASEMLAYA HETQHEKIIR GLALGIALTV YGREEEADTL IEQMTRDQDP ILRYGGMYAL
0601: ALAYQGTANN KAIRQLLHFA VSDVSDDVRR TAVLALGFVL YSEPEQTPRI VSLLSESYNP HVRYGAALAV GISCAGTGLS EAISLLEPLT SDVVDFVRQG
0701: ALIAMAMVMV QISETSDSRV GTFRRQLEKI ILDKHEDTMS KMGAILASGI LDAGGRNVTI RLLSKTKHDK VTAVVGLAVF SQFWYWYPLI YFISLSFSPT
0801: AFIGLNYDLK VPTFEFLSHA KPSLFEYPRP TTVPTATSTV KLPTAVLSTS AKAKARAKKE AEQKVNAEKS AGTESSSSTG QSSGKGKSTT EKDGDSMQVD
0901: SPSEKKVEPE ASFEILTNPA RVVPAQEKFI KFLEESRYVP VKLAPSGFVL LRDLRPTEPE VLSLTDTPSS TASPAGGSAT GQQAAASAMA VDEEPQPPQA
1001: FEYTS
0001: MATPMVSSAG GLLAMLNEPH PVLKLHALSN LNNLVDQFWP EISTSVPIIE SLYEDEEFDL HQRQLAALLV SKVFYYLGEL NDSLSYALGA GPLFDVSEDS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
Arabidopsis Description
RPN2A26S proteasome non-ATPase regulatory subunit 1 homolog A [Source:UniProtKB/Swiss-Prot;Acc:O48844]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.