Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0215g00050.t01 | Wine grape | cytosol | 35.11 | 11.0 |
| VIT_10s0042g00800.t01 | Wine grape | cytosol, plastid | 41.49 | 3.88 |
| VIT_00s0125g00380.t01 | Wine grape | cytosol | 1.06 | 2.38 |
| VIT_12s0028g03130.t01 | Wine grape | cytosol | 18.09 | 1.91 |
| VIT_03s0038g02720.t01 | Wine grape | cytosol | 2.13 | 1.5 |
| VIT_00s0215g00040.t01 | Wine grape | extracellular | 8.51 | 1.25 |
| GSMUA_Achr1P10570_001 | Banana | extracellular | 1.06 | 0.67 |
| CDY33145 | Canola | extracellular | 0.0 | 0.0 |
| KRH30250 | Soybean | cytosol | 0.0 | 0.0 |
| VIT_00s0125g00350.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.2 | ProteinID:CCB46507 | ProteinID:CCB46507.1 | UniProt:F6H2R5 | EMBL:FN595230 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004175 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008540 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0034515 | GO:GO:0043161 | UniParc:UPI00021089D2 |
| ArrayExpress:VIT_00s0125g00320 | EnsemblPlantsGene:VIT_00s0125g00320 | EnsemblPlants:VIT_00s0125g00320.t01 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrUn:-:2021148..2021611
Molecular Weight (calculated)
10687.4 Da
IEP (calculated)
10.533
GRAVY (calculated)
-0.121
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MKIPAKGRKC LFKVKSLVSV LLTQGISFGK WLSSSPSEKK PEPEASFEIL TNLVRVVPAQ EKFIKFLEES RYVPGVKLRK KKKICICVEL VQHD
001: MKYLQEEGSK SDEEDRKSSL EAMEKTNVDL ELWKESFENL FNNVLMTTTR KRGEKFASKG RNKRGDKSQK KAKKWCDICT CDDHIEGAEF SSVAKVADED
101: VKRFSRTRRR KDVVVIKRGH HKRMLTSEKN GAQEDAYLGE KWSISRLKSK PKTT
101: VKRFSRTRRR KDVVVIKRGH HKRMLTSEKN GAQEDAYLGE KWSISRLKSK PKTT
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34095.1); Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NC /.../nk). [Source:TAIR;Acc:AT2G45403]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.