Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99107 | Canola | cytosol | 13.04 | 1.16 |
| CDY33144 | Canola | extracellular | 13.04 | 0.96 |
| CDY65736 | Canola | extracellular | 13.04 | 0.74 |
| CDY72396 | Canola | cytosol | 4.35 | 0.69 |
| CDX97442 | Canola | cytosol | 26.09 | 0.68 |
| CDY14239 | Canola | cytosol, extracellular | 26.09 | 0.68 |
| CDY38389 | Canola | cytosol, extracellular | 26.09 | 0.67 |
| CDY35187 | Canola | cytosol, extracellular | 26.09 | 0.67 |
| GSMUA_Achr1P10570_001 | Banana | extracellular | 4.35 | 0.67 |
| CDY31952 | Canola | plasma membrane | 21.74 | 0.58 |
| CDY29907 | Canola | extracellular | 21.74 | 0.56 |
| CDX92875 | Canola | extracellular | 21.74 | 0.56 |
| CDY05774 | Canola | cytosol | 21.74 | 0.56 |
| CDY60623 | Canola | endoplasmic reticulum, golgi | 17.39 | 0.41 |
| CDY12178 | Canola | cytosol | 17.39 | 0.4 |
| CDX79472 | Canola | cytosol, plastid | 17.39 | 0.4 |
| CDY19162 | Canola | extracellular | 17.39 | 0.4 |
| CDX84724 | Canola | cytosol, plastid | 17.39 | 0.4 |
| CDY23791 | Canola | cytosol, plastid | 17.39 | 0.4 |
| KRH30250 | Soybean | cytosol | 0.0 | 0.0 |
| VIT_00s0125g00320.t01 | Wine grape | mitochondrion, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY33145 | EnsemblPlantsGene:GSBRNA2T00053841001 | GO:A0A078H3E1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| ProteinID:CDY33145 | ProteinID:CDY33145.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EDACBE | UniProt:A0A078H3E1 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaCnng07160DBnaCnng07160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3E1]
Coordinates
chrLK032307:+:238026..238097
Molecular Weight (calculated)
2605.3 Da
IEP (calculated)
3.750
GRAVY (calculated)
1.726
Length
23 amino acids
Sequence
(BLAST)
(BLAST)
1: MVWAAPAAVV VLMLLDLGYY YVF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.