Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G351400.1 | Wheat | cytosol, endoplasmic reticulum | 97.31 | 97.31 |
| TraesCS1A01G348400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 90.32 | 96.17 |
| HORVU1Hr1G081810.8 | Barley | cytosol, plasma membrane | 86.23 | 90.38 |
| TraesCS2B01G450800.2 | Wheat | cytosol, endoplasmic reticulum | 84.63 | 82.33 |
| KXG27072 | Sorghum | plasma membrane | 80.94 | 80.46 |
| Zm00001d026265_P002 | Maize | plasma membrane | 80.14 | 78.57 |
| Zm00001d002373_P006 | Maize | cytosol, plasma membrane | 78.74 | 78.27 |
| Os04t0608500-01 | Rice | plasma membrane | 23.65 | 76.95 |
| VIT_00s0215g00040.t01 | Wine grape | extracellular | 46.51 | 72.81 |
| GSMUA_Achr1P10550_001 | Banana | cytosol | 73.35 | 72.7 |
| VIT_10s0042g00800.t01 | Wine grape | cytosol, plastid | 72.75 | 72.54 |
| AT2G32730.1 | Thale cress | cytosol | 71.56 | 71.41 |
| CDX79472 | Canola | cytosol, plastid | 71.16 | 71.37 |
| CDY12178 | Canola | cytosol | 70.56 | 71.27 |
| Bra022899.1-P | Field mustard | cytosol, plastid | 71.16 | 71.02 |
| CDX84724 | Canola | cytosol, plastid | 71.16 | 70.95 |
| CDY19162 | Canola | extracellular | 70.86 | 70.72 |
| KRH60454 | Soybean | endoplasmic reticulum | 70.96 | 70.68 |
| Bra021810.1-P | Field mustard | cytosol, plastid | 70.76 | 70.62 |
| KRH41754 | Soybean | nucleus | 70.86 | 70.58 |
| CDY23791 | Canola | cytosol, plastid | 70.76 | 70.34 |
| PGSC0003DMT400076219 | Potato | endoplasmic reticulum | 70.46 | 70.32 |
| PGSC0003DMT400040763 | Potato | cytosol | 69.66 | 70.29 |
| VIT_00s0125g00350.t01 | Wine grape | cytosol | 12.97 | 70.27 |
| Bra005560.1-P | Field mustard | plastid | 70.56 | 70.14 |
| AT1G04810.1 | Thale cress | cytosol | 70.06 | 70.13 |
| Solyc05g053650.2.1 | Tomato | endoplasmic reticulum | 69.46 | 70.09 |
| Solyc09g091750.2.1 | Tomato | plastid | 70.06 | 69.92 |
| CDY60623 | Canola | endoplasmic reticulum, golgi | 67.17 | 69.45 |
| VIT_00s0215g00050.t01 | Wine grape | cytosol | 17.86 | 59.67 |
| TraesCS7B01G321900.1 | Wheat | cytosol | 13.37 | 15.46 |
| TraesCS7B01G322000.1 | Wheat | cytosol | 13.37 | 15.23 |
| TraesCS6B01G144500.1 | Wheat | cytosol | 13.67 | 15.15 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.6.2.2.2 | InterPro:26S_Psome_Rpn2 | InterPro:ARM-like | InterPro:ARM-type_fold | ncoils:Coil |
| GO:GO:0000502 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0042176 |
| InterPro:IPR011989 | PFAM:PF01851 | PFAM:PF13646 | PIRSF:PIRSF015947 | PANTHER:PTHR10943 | PANTHER:PTHR10943:SF10 |
| InterPro:Proteasome/cyclosome_rpt | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS1B01G363000 | EnsemblPlants:TraesCS1B01G363000.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr1B:-:591435701..591440826
Molecular Weight (calculated)
108638.0 Da
IEP (calculated)
4.874
GRAVY (calculated)
-0.109
Length
1002 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAATATVSSA GGILAMLHEP AEELKLHALA SLNSVVHLFY PEISTSIPAI ESMYEDDEFD QRQLAALVVS KVFYYLGELN DALSYALGAG PLFDVSEDSD
0101: YALALLAKAL DEYASFKTRA SKAMEEEENV DPRLEAIVER MLERCILDGK YQQAMGMAVE CRRLDKLEEA IVQCANIHGA LSYCINFSHQ YVSHREYRSE
0201: VLRCLVKIYQ TLPHPDYLSI CQCLMVLGEH ETVANILDTL LSGSQDDALI AYQIAFDLVE NENQAFLLNV GNRLDSQTPG QSALPVDQTV NARTTSTEPA
0301: GDVQMGDGTT TSNRNAHPVD PNEAAHADRL AKLKGILSGE KSIQLTLQFL YSHNRSDLLI LKTIKQAVET SGNVCHSATV CSNAIMHAGT TVDTFLRENL
0401: EWLSKATKWA KFSATAGLGV IHRGHLQQGR ALMAPYLPQN GAVGGGSPYS EGGALYALGL IHANHGEGIK QFLRESLRNT SAEVIQHGAC LGLGLASLGT
0501: ADEEVFEDIK NVLYTDSAVA GEAAGIGMGL LMVGTASEKA GEMLAYAHDT QHEKIIRGLA LGIALTMYGR EEEADTLIEQ MTRDQDPILR YGGMYALALA
0601: YRGTANNKAI HQLLHFAVSD VSDDVRRTAV MGLGFVLYNE PEQTPRIVSL LSESYNPHVR YGAALAVGIS CAGTGLSDAI SLLEPLTSDV VDFVRQGALI
0701: AMAMVMIQTN ESFDSRVGTF RRQLEKIILD KHEDTMSKMG AILASGILDA GGRNVTIKLR SRNKHDKLTA VIGLAVFTQF WYWYPLLYFI SLAFSPTAIM
0801: GLNSNLEVPK FEFMSHAKPS LFEYPKPTTQ QATTSAVELP TAILSTYAKA KSRAKKDAES KAAANQEKTA AEAESKAANQ EKSTEDASGS TSGKAADAMQ
0901: VDSTAEKKAP EPEPAFQILA NPARVVPLQE KFIKFIEGSR YVPVRPAPCG GFILLRDMQP SEAEELVVLT DAPATGQPVP GASAMAVDDD EPQPPQPFEY
1001: LS
0101: YALALLAKAL DEYASFKTRA SKAMEEEENV DPRLEAIVER MLERCILDGK YQQAMGMAVE CRRLDKLEEA IVQCANIHGA LSYCINFSHQ YVSHREYRSE
0201: VLRCLVKIYQ TLPHPDYLSI CQCLMVLGEH ETVANILDTL LSGSQDDALI AYQIAFDLVE NENQAFLLNV GNRLDSQTPG QSALPVDQTV NARTTSTEPA
0301: GDVQMGDGTT TSNRNAHPVD PNEAAHADRL AKLKGILSGE KSIQLTLQFL YSHNRSDLLI LKTIKQAVET SGNVCHSATV CSNAIMHAGT TVDTFLRENL
0401: EWLSKATKWA KFSATAGLGV IHRGHLQQGR ALMAPYLPQN GAVGGGSPYS EGGALYALGL IHANHGEGIK QFLRESLRNT SAEVIQHGAC LGLGLASLGT
0501: ADEEVFEDIK NVLYTDSAVA GEAAGIGMGL LMVGTASEKA GEMLAYAHDT QHEKIIRGLA LGIALTMYGR EEEADTLIEQ MTRDQDPILR YGGMYALALA
0601: YRGTANNKAI HQLLHFAVSD VSDDVRRTAV MGLGFVLYNE PEQTPRIVSL LSESYNPHVR YGAALAVGIS CAGTGLSDAI SLLEPLTSDV VDFVRQGALI
0701: AMAMVMIQTN ESFDSRVGTF RRQLEKIILD KHEDTMSKMG AILASGILDA GGRNVTIKLR SRNKHDKLTA VIGLAVFTQF WYWYPLLYFI SLAFSPTAIM
0801: GLNSNLEVPK FEFMSHAKPS LFEYPKPTTQ QATTSAVELP TAILSTYAKA KSRAKKDAES KAAANQEKTA AEAESKAANQ EKSTEDASGS TSGKAADAMQ
0901: VDSTAEKKAP EPEPAFQILA NPARVVPLQE KFIKFIEGSR YVPVRPAPCG GFILLRDMQP SEAEELVVLT DAPATGQPVP GASAMAVDDD EPQPPQPFEY
1001: LS
0001: MAAAMVSSAG GLLAMLNEPH PSLKLHALSY LIRLVDQFWP EISTSVPIIE SLYEDEEFDQ HQRQLAALLA SKVFYYLGEL NDSLSYALGA GSLFDVSEDS
0101: DYIHTLLSKA IDEYAILRSK AVESSEVVEI DPRLVAIVER MLDKCITDGK YQQAMGIAIE CRRLDKLEEA IIKSENVQGT LSYCINVSHS FVNQREYRHE
0201: VLRLLVNVYQ KLASPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LAFQISFDLV QNEHQAFLMS VRDRLPAPKT RPVEAIQAVE TSTAQNENTA
0301: GDVQMADETP SQTIVHETDP VDAVYAERLT KAKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTS VEVIQHGACL GLGLAALGTA
0501: DEDIYDDIKS VLYTDSAVAG EAAGISMGLL LVGTATDKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGAFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLTVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVA TANTAAKLPT AVLSTSAKAK AKAKKEAEQK AKAENSGNEA GKANAASDEK EAESMQVDST ATTVEKKVEP
0901: EATFEILVNP ARVVPSQEKY IKLMEDSRYV PMKLAPSGFV LLRDLRPHEP EVLSLTDAPT STASPAVGAE AAGQAQQAAT TSAMAIDDEP QPPQAFEYAS
1001: P
0101: DYIHTLLSKA IDEYAILRSK AVESSEVVEI DPRLVAIVER MLDKCITDGK YQQAMGIAIE CRRLDKLEEA IIKSENVQGT LSYCINVSHS FVNQREYRHE
0201: VLRLLVNVYQ KLASPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LAFQISFDLV QNEHQAFLMS VRDRLPAPKT RPVEAIQAVE TSTAQNENTA
0301: GDVQMADETP SQTIVHETDP VDAVYAERLT KAKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTS VEVIQHGACL GLGLAALGTA
0501: DEDIYDDIKS VLYTDSAVAG EAAGISMGLL LVGTATDKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGAFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLTVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVA TANTAAKLPT AVLSTSAKAK AKAKKEAEQK AKAENSGNEA GKANAASDEK EAESMQVDST ATTVEKKVEP
0901: EATFEILVNP ARVVPSQEKY IKLMEDSRYV PMKLAPSGFV LLRDLRPHEP EVLSLTDAPT STASPAVGAE AAGQAQQAAT TSAMAIDDEP QPPQAFEYAS
1001: P
Arabidopsis Description
RPN2B26S proteasome non-ATPase regulatory subunit 1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.