Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G363000.1 | Wheat | cytosol | 97.31 | 97.31 |
| TraesCS1A01G348400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 90.72 | 96.6 |
| HORVU1Hr1G081810.8 | Barley | cytosol, plasma membrane | 85.83 | 89.96 |
| TraesCS2D01G427700.2 | Wheat | endoplasmic reticulum, plasma membrane | 84.53 | 82.15 |
| KXG27072 | Sorghum | plasma membrane | 80.44 | 79.96 |
| Zm00001d002373_P006 | Maize | cytosol, plasma membrane | 78.64 | 78.17 |
| Zm00001d026265_P002 | Maize | plasma membrane | 79.54 | 77.98 |
| Os04t0608500-01 | Rice | plasma membrane | 23.75 | 77.27 |
| VIT_00s0215g00040.t01 | Wine grape | extracellular | 46.71 | 73.12 |
| GSMUA_Achr1P10550_001 | Banana | cytosol | 73.05 | 72.4 |
| VIT_10s0042g00800.t01 | Wine grape | cytosol, plastid | 72.36 | 72.14 |
| CDY12178 | Canola | cytosol | 70.36 | 71.07 |
| CDX79472 | Canola | cytosol, plastid | 70.76 | 70.97 |
| AT2G32730.1 | Thale cress | cytosol | 70.76 | 70.62 |
| Bra022899.1-P | Field mustard | cytosol, plastid | 70.76 | 70.62 |
| CDX84724 | Canola | cytosol, plastid | 70.76 | 70.55 |
| CDY19162 | Canola | extracellular | 70.66 | 70.52 |
| Bra021810.1-P | Field mustard | cytosol, plastid | 70.56 | 70.42 |
| KRH60454 | Soybean | endoplasmic reticulum | 70.56 | 70.28 |
| KRH41754 | Soybean | nucleus | 70.46 | 70.18 |
| CDY23791 | Canola | cytosol, plastid | 70.56 | 70.14 |
| PGSC0003DMT400040763 | Potato | cytosol | 69.46 | 70.09 |
| Bra005560.1-P | Field mustard | plastid | 70.46 | 70.04 |
| PGSC0003DMT400076219 | Potato | endoplasmic reticulum | 70.06 | 69.92 |
| Solyc05g053650.2.1 | Tomato | endoplasmic reticulum | 69.16 | 69.79 |
| AT1G04810.1 | Thale cress | cytosol | 69.66 | 69.73 |
| VIT_00s0125g00350.t01 | Wine grape | cytosol | 12.87 | 69.73 |
| Solyc09g091750.2.1 | Tomato | plastid | 69.56 | 69.42 |
| CDY60623 | Canola | endoplasmic reticulum, golgi | 66.87 | 69.14 |
| VIT_00s0215g00050.t01 | Wine grape | cytosol | 18.06 | 60.33 |
| TraesCS7D01G413900.1 | Wheat | mitochondrion | 13.27 | 16.0 |
| TraesCS7D01G413800.1 | Wheat | cytosol | 9.48 | 15.32 |
| TraesCS6D01G105500.1 | Wheat | golgi | 13.67 | 15.31 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.6.2.2.2 | InterPro:26S_Psome_Rpn2 | InterPro:ARM-like | InterPro:ARM-type_fold | ncoils:Coil |
| GO:GO:0000502 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0042176 |
| InterPro:IPR011989 | PFAM:PF01851 | PFAM:PF13646 | PIRSF:PIRSF015947 | PANTHER:PTHR10943 | PANTHER:PTHR10943:SF10 |
| InterPro:Proteasome/cyclosome_rpt | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS1D01G351400 | EnsemblPlants:TraesCS1D01G351400.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr1D:-:436618726..436623932
Molecular Weight (calculated)
108233.0 Da
IEP (calculated)
4.866
GRAVY (calculated)
-0.082
Length
1002 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAAAATVSS AGGILAMLHE PAEELKLHAL ASLNSVVHLF YPEISTSIPA IESMYEDDEF DQRQLAALVV SKVFYYLGEL NDALSYALGA GPLFDVSEDS
0101: DYAQALLAKA LDEYASFKTR ASKAMEELEN VDPRLETIVE RMLERCILDG KYQQAMGMAV ECRRLDKLEE AIVRCANIHG ALSYCISLSH QYVSHREYRS
0201: EVLRCLVKIY QTLPHPDYLS ICQCLMVLGE PETVANILDT LLSGSQDDAL IAYQIAFDLV ENENQAFLLN VGNRLDSQTP GQSALPVDQT VNAGTTSTEP
0301: AGDVQMGDGT TTSNRNAHPV DPDEAAHADR LAKLKGILSG EKSIQLTLQF LYSHSRSDLL ILKTIKQAVE TSGNVCHSAT ICSNAIMHAG TTVDTFLREN
0401: LEWLSKATNW AKFSATAGLG VIHRGHLQQG RALMAPYLPQ NGAVGGGSPY SEGGALYALG LIHANHGEGI KQFLRESLRN TSAEVIQHGA CLGLGLASLG
0501: TADEEVFEDI KNVLYTDSAV AGEAAGIGMG LLMVGTASEK AGEMLAYAHD TQHEKIIRGL ALGIALTMYG REEEADTLIE QMTRDQDPIL RYGGMYALAL
0601: AYRGTANNKA IHQLLHFAVS DVSDDVRRTA VMGLGFVLYN EPEQTPRIVS LLSESYNPHV RYGAALAVGI SCAGTGLSDA ISLLEPLTSD VVDFVRQGAL
0701: IAMAMVMIQT NESFDSRVGT FRRQLQKIIL DKHEDTMSKM GAILASGILD AGGRNVTIKL RSRNKHDKLT AVIGLAVFTQ FWNWYPLLYF ISLAFSPTAI
0801: IGLNSNLEVL KFEFMSHAKP SLFEYPKPTT QQATTSAVEL PTAILSTYAK AKSRAKKDAE SKAAANQEKA AAEAESKAAN QEKSTEDASG STSGKAADAM
0901: QVDSTAEKKA AEPEPAFQIL ANPARVVPLQ EKFIKFIEGS RYVPVRPAPC GGFILLRDTQ PSEAEELVVL TDAPASGQPV SGASAMAVDD EPQPPQPFEY
1001: LS
0101: DYAQALLAKA LDEYASFKTR ASKAMEELEN VDPRLETIVE RMLERCILDG KYQQAMGMAV ECRRLDKLEE AIVRCANIHG ALSYCISLSH QYVSHREYRS
0201: EVLRCLVKIY QTLPHPDYLS ICQCLMVLGE PETVANILDT LLSGSQDDAL IAYQIAFDLV ENENQAFLLN VGNRLDSQTP GQSALPVDQT VNAGTTSTEP
0301: AGDVQMGDGT TTSNRNAHPV DPDEAAHADR LAKLKGILSG EKSIQLTLQF LYSHSRSDLL ILKTIKQAVE TSGNVCHSAT ICSNAIMHAG TTVDTFLREN
0401: LEWLSKATNW AKFSATAGLG VIHRGHLQQG RALMAPYLPQ NGAVGGGSPY SEGGALYALG LIHANHGEGI KQFLRESLRN TSAEVIQHGA CLGLGLASLG
0501: TADEEVFEDI KNVLYTDSAV AGEAAGIGMG LLMVGTASEK AGEMLAYAHD TQHEKIIRGL ALGIALTMYG REEEADTLIE QMTRDQDPIL RYGGMYALAL
0601: AYRGTANNKA IHQLLHFAVS DVSDDVRRTA VMGLGFVLYN EPEQTPRIVS LLSESYNPHV RYGAALAVGI SCAGTGLSDA ISLLEPLTSD VVDFVRQGAL
0701: IAMAMVMIQT NESFDSRVGT FRRQLQKIIL DKHEDTMSKM GAILASGILD AGGRNVTIKL RSRNKHDKLT AVIGLAVFTQ FWNWYPLLYF ISLAFSPTAI
0801: IGLNSNLEVL KFEFMSHAKP SLFEYPKPTT QQATTSAVEL PTAILSTYAK AKSRAKKDAE SKAAANQEKA AAEAESKAAN QEKSTEDASG STSGKAADAM
0901: QVDSTAEKKA AEPEPAFQIL ANPARVVPLQ EKFIKFIEGS RYVPVRPAPC GGFILLRDTQ PSEAEELVVL TDAPASGQPV SGASAMAVDD EPQPPQPFEY
1001: LS
0001: MAAAMVSSAG GLLAMLNEPH PSLKLHALSY LIRLVDQFWP EISTSVPIIE SLYEDEEFDQ HQRQLAALLA SKVFYYLGEL NDSLSYALGA GSLFDVSEDS
0101: DYIHTLLSKA IDEYAILRSK AVESSEVVEI DPRLVAIVER MLDKCITDGK YQQAMGIAIE CRRLDKLEEA IIKSENVQGT LSYCINVSHS FVNQREYRHE
0201: VLRLLVNVYQ KLASPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LAFQISFDLV QNEHQAFLMS VRDRLPAPKT RPVEAIQAVE TSTAQNENTA
0301: GDVQMADETP SQTIVHETDP VDAVYAERLT KAKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTS VEVIQHGACL GLGLAALGTA
0501: DEDIYDDIKS VLYTDSAVAG EAAGISMGLL LVGTATDKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGAFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLTVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVA TANTAAKLPT AVLSTSAKAK AKAKKEAEQK AKAENSGNEA GKANAASDEK EAESMQVDST ATTVEKKVEP
0901: EATFEILVNP ARVVPSQEKY IKLMEDSRYV PMKLAPSGFV LLRDLRPHEP EVLSLTDAPT STASPAVGAE AAGQAQQAAT TSAMAIDDEP QPPQAFEYAS
1001: P
0101: DYIHTLLSKA IDEYAILRSK AVESSEVVEI DPRLVAIVER MLDKCITDGK YQQAMGIAIE CRRLDKLEEA IIKSENVQGT LSYCINVSHS FVNQREYRHE
0201: VLRLLVNVYQ KLASPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LAFQISFDLV QNEHQAFLMS VRDRLPAPKT RPVEAIQAVE TSTAQNENTA
0301: GDVQMADETP SQTIVHETDP VDAVYAERLT KAKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTS VEVIQHGACL GLGLAALGTA
0501: DEDIYDDIKS VLYTDSAVAG EAAGISMGLL LVGTATDKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGAFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLTVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVA TANTAAKLPT AVLSTSAKAK AKAKKEAEQK AKAENSGNEA GKANAASDEK EAESMQVDST ATTVEKKVEP
0901: EATFEILVNP ARVVPSQEKY IKLMEDSRYV PMKLAPSGFV LLRDLRPHEP EVLSLTDAPT STASPAVGAE AAGQAQQAAT TSAMAIDDEP QPPQAFEYAS
1001: P
Arabidopsis Description
RPN2B26S proteasome non-ATPase regulatory subunit 1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.