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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY72396 Canola cytosol 71.43 41.67
PGSC0003DMT400056260 Potato cytosol 58.33 27.22
Solyc10g008170.2.1 Tomato cytosol 58.33 24.26
CDX99107 Canola cytosol 51.19 16.6
CDY33144 Canola extracellular 51.19 13.74
CDY65736 Canola extracellular 47.62 9.85
AT2G20580.1 Thale cress cytosol 79.76 7.52
AT4G28470.1 Thale cress cytosol 67.86 6.4
GSMUA_Achr11P... Banana cytosol 66.67 6.31
Os06t0699900-01 Rice plasma membrane 66.67 6.22
Os09t0326800-01 Rice plasma membrane 65.48 6.17
TraesCS6D01G105500.1 Wheat golgi 64.29 6.03
TraesCS6A01G116500.1 Wheat golgi, unclear 64.29 6.03
Os02t0146700-02 Rice plasma membrane 64.29 6.01
TraesCS6B01G144500.1 Wheat cytosol 64.29 5.97
Zm00001d015259_P001 Maize cytosol 63.1 5.96
Zm00001d053881_P001 Maize mitochondrion, plastid 63.1 5.94
EES04513 Sorghum cytosol 63.1 5.93
HORVU6Hr1G021020.1 Barley cytosol 63.1 5.9
TraesCS7D01G413800.1 Wheat cytosol 38.1 5.16
TraesCS7A01G421700.1 Wheat cytosol 51.19 4.89
TraesCS7B01G321900.1 Wheat cytosol 50.0 4.84
TraesCS7B01G322000.1 Wheat cytosol 50.0 4.77
KRH30269 Soybean cytosol 9.52 3.9
TraesCS7A01G421600.1 Wheat mitochondrion 36.9 3.79
TraesCS7D01G413900.1 Wheat mitochondrion 36.9 3.73
Bra003811.1-P Field mustard endoplasmic reticulum 8.33 2.85
AT1G04810.1 Thale cress cytosol 13.1 1.1
AT2G32730.1 Thale cress cytosol 13.1 1.1
HORVU7Hr1G097500.16 Barley endoplasmic reticulum, golgi, plasma membrane 5.95 0.85
GSMUA_Achr1P10580_001 Banana cytosol, nucleus, plasma membrane 0.0 0.0
KRH57675 Soybean cytosol 0.0 0.0
Protein Annotations
MapMan:35.1EntrezGene:826362ProteinID:AAD27898.1ProteinID:AEE82596.1ArrayExpress:AT4G08140EnsemblPlantsGene:AT4G08140
RefSeq:AT4G08140TAIR:AT4G08140RefSeq:AT4G08140-TAIR-GEnsemblPlants:AT4G08140.1TAIR:AT4G08140.1Unigene:At.54196
ProteinID:CAB81150.1GO:GO:0000502GO:GO:0003674GO:GO:0003824GO:GO:0004175GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005829GO:GO:0008150
GO:GO:0008152GO:GO:0008540GO:GO:0009056GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0019538GO:GO:0034515GO:GO:0043161RefSeq:NP_192554.1PANTHER:PTHR10943
PANTHER:PTHR10943:SF8UniProt:Q9SYE4TMHMM:TMhelixUniParc:UPI00000A7509::
Description
26S proteasome non-ATPase regulatory subunit-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SYE4]
Coordinates
chr4:+:5135673..5136140
Molecular Weight (calculated)
9756.0 Da
IEP (calculated)
10.318
GRAVY (calculated)
-0.179
Length
84 amino acids
Sequence
(BLAST)
1: MVQDPNPDLQ KAALESMRQE IRALTSSMTS VPKPLKFLRP QYVTLKAFHE TMADSNLKKY ISDILSVLAL TTLYRLHYFL ITRR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.