Factsheet for Solyc11g070140.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g095860.1.1	Tomato	cytosol, nucleus	86.05	86.05
PGSC0003DMT400047738	Potato	cytosol	88.44	85.81
TraesCS6B01G105100.1	Wheat	cytosol	79.93	80.2
TraesCS5A01G521700.1	Wheat	cytosol	79.93	79.93
TraesCS4B01G353600.1	Wheat	cytosol	79.93	79.93
TraesCS6A01G078200.1	Wheat	cytosol	79.59	79.86
Zm00001d053930_P001	Maize	cytosol	78.57	79.11
GSMUA_Achr11P...	Banana	cytosol	75.51	79.0
EES04403	Sorghum	cytosol	78.23	78.5
KXG40336	Sorghum	cytosol	77.21	77.21
Solyc08g066330.1.1	Tomato	cytosol	80.61	77.2
Zm00001d048497_P002	Maize	cytosol	78.91	76.57
TraesCS4D01G347600.1	Wheat	cytosol	79.93	71.87
HORVU4Hr1G085830.4	Barley	cytosol	79.25	68.33
HORVU6Hr1G013680.2	Barley	cytosol, plastid	79.93	63.51
Zm00001d027373_P003	Maize	cytosol	78.91	63.22
Os02t0123100-01	Rice	mitochondrion	79.25	61.97
Solyc10g074720.1.1	Tomato	cytosol, nucleus	58.5	56.77
Solyc04g082840.2.1	Tomato	cytosol	55.78	52.06
Solyc12g027870.1.1	Tomato	cytosol	43.88	38.39
Solyc08g067450.1.1	Tomato	cytosol	34.35	32.27
Solyc08g081280.2.1	Tomato	cytosol, nucleus	44.9	31.5
Solyc08g075890.2.1	Tomato	cytosol	39.12	25.39
Solyc08g005470.2.1	Tomato	cytosol	37.41	24.39
Solyc06g083210.2.1	Tomato	cytosol	36.05	24.26
Solyc05g014760.2.1	Tomato	nucleus	46.94	17.06

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.1	MapMan:18.4.3.1.1	Gene3D:3.30.200.20	GO:GO:0000003	GO:GO:0000166
GO:GO:0000226	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004693
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005856	GO:GO:0006139	GO:GO:0006259	GO:GO:0006281	GO:GO:0006464
GO:GO:0006468	GO:GO:0006950	GO:GO:0007049	GO:GO:0007346	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0010468	GO:GO:0016043	GO:GO:0016301	GO:GO:0016572	GO:GO:0016740
GO:GO:0019538	GO:GO:0030154	GO:GO:0044772	GO:GO:0051445	GO:GO:0072686	InterPro:IPR000719
UniProt:K4DAH0	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF323	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc11g070140.1	EnsemblPlants:Solyc11g070140.1.1	UniParc:UPI0002769554	:

Description

Cyclin-dependent kinase A-1 [Source:Projected from Arabidopsis thaliana (AT3G48750) UniProtKB/Swiss-Prot;Acc:P24100]

Coordinates

chr11:+:54661689..54666936

Molecular Weight (calculated)

33581.7 Da

IEP (calculated)

7.605

GRAVY (calculated)

-0.221

Length

294 amino acids

Sequence
(BLAST)

001: MDQYEKIGKI GEGTYGVVYK AFVRETKEIV ALKKIRLEQE DEGVPSTAIR EISLLKEMQH GNIVRLLDVV HSERRLYLVF EYLDLDLKKH MDSCPEFSKD
101: TGVVKSFVYQ MLRGLAYCHS RRVLHRDLKP QNLLIDPRTN VLKLADFGLG RAFGIPVRTF THEVVTLWYR APEILLGSRH YSTPVDVWSA GCIFAEMVNQ
201: QPLFPGDSEI DELFSIFRVV GTPNENTWPG VTSLPDYKSS FPKWSPKDLA TLVPNLDTAG FDLLGKMLCL DPSKRITAKS ALEHEYFKDI GRVR

Best Arabidopsis Sequence Match ( AT3G48750.1 )
(BLAST)

001: MDQYEKVEKI GEGTYGVVYK ARDKVTNETI ALKKIRLEQE DEGVPSTAIR EISLLKEMQH SNIVKLQDVV HSEKRLYLVF EYLDLDLKKH MDSTPDFSKD
101: LHMIKTYLYQ ILRGIAYCHS HRVLHRDLKP QNLLIDRRTN SLKLADFGLA RAFGIPVRTF THEVVTLWYR APEILLGSHH YSTPVDIWSV GCIFAEMISQ
201: KPLFPGDSEI DQLFKIFRIM GTPYEDTWRG VTSLPDYKSA FPKWKPTDLE TFVPNLDPDG VDLLSKMLLM DPTKRINARA ALEHEYFKDL GGMP

Arabidopsis Description

CDKA-1Cyclin-dependent kinase A-1 [Source:UniProtKB/Swiss-Prot;Acc:P24100]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.