Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G521700.1 | Wheat | cytosol | 84.16 | 97.62 |
| TraesCS4B01G353600.1 | Wheat | cytosol | 84.16 | 97.62 |
| KXG40336 | Sorghum | cytosol | 77.71 | 90.14 |
| Zm00001d048497_P002 | Maize | cytosol | 80.06 | 90.1 |
| TraesCS4D01G347600.1 | Wheat | cytosol | 85.04 | 88.69 |
| GSMUA_Achr4P04710_001 | Banana | cytosol | 74.78 | 86.73 |
| VIT_15s0045g00310.t01 | Wine grape | cytosol | 73.9 | 85.71 |
| Solyc12g095860.1.1 | Tomato | cytosol, nucleus | 73.31 | 85.03 |
| PGSC0003DMT400075349 | Potato | cytosol | 73.31 | 85.03 |
| KRH36887 | Soybean | cytosol, nucleus | 72.14 | 83.67 |
| KRH11866 | Soybean | cytosol, nucleus | 71.85 | 83.33 |
| KRH58370 | Soybean | cytosol | 72.73 | 82.67 |
| KRH42252 | Soybean | cytosol | 71.26 | 82.65 |
| AT3G48750.1 | Thale cress | cytosol | 70.97 | 82.31 |
| Bra018036.1-P | Field mustard | cytosol | 70.38 | 81.63 |
| CDX68497 | Canola | cytosol | 70.38 | 81.63 |
| Solyc11g070140.1.1 | Tomato | cytosol | 68.33 | 79.25 |
| GSMUA_Achr3P26790_001 | Banana | cytosol | 61.0 | 78.2 |
| Bra029917.1-P | Field mustard | cytosol | 70.97 | 77.56 |
| Solyc08g066330.1.1 | Tomato | cytosol | 69.79 | 77.52 |
| CDX83047 | Canola | cytosol | 70.67 | 77.24 |
| CDX87018 | Canola | cytosol | 52.79 | 75.95 |
| Zm00001d027373_P003 | Maize | cytosol | 78.89 | 73.3 |
| PGSC0003DMT400047738 | Potato | cytosol | 65.1 | 73.27 |
| CDY66197 | Canola | cytosol | 71.26 | 71.89 |
| PGSC0003DMT400077428 | Potato | cytosol | 61.88 | 70.81 |
| HORVU6Hr1G013680.2 | Barley | cytosol, plastid | 75.66 | 69.73 |
| GSMUA_Achr4P04700_001 | Banana | cytosol, extracellular | 61.58 | 66.67 |
| CDY05870 | Canola | cytosol, plastid | 71.85 | 64.64 |
| CDY67496 | Canola | cytosol | 44.28 | 47.78 |
| HORVU5Hr1G046190.1 | Barley | plastid | 50.15 | 45.84 |
| HORVU7Hr1G051180.3 | Barley | cytosol | 43.7 | 44.61 |
| HORVU4Hr1G023490.7 | Barley | endoplasmic reticulum, vacuole | 49.27 | 44.33 |
| HORVU1Hr1G062980.2 | Barley | cytosol | 41.64 | 33.41 |
| HORVU1Hr1G051380.3 | Barley | cytosol | 40.18 | 29.15 |
| HORVU5Hr1G120960.2 | Barley | cytosol | 32.55 | 25.17 |
| HORVU0Hr1G016660.4 | Barley | cytosol | 30.79 | 22.78 |
| HORVU6Hr1G068270.1 | Barley | cytosol | 30.79 | 22.78 |
| HORVU7Hr1G008690.3 | Barley | endoplasmic reticulum, plasma membrane | 31.67 | 21.6 |
| HORVU6Hr1G054600.5 | Barley | nucleus | 39.3 | 19.73 |
| HORVU2Hr1G084400.1 | Barley | nucleus | 42.52 | 19.26 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.1 | MapMan:18.4.3.1.1 | Gene3D:3.30.200.20 | UniProt:A0A287PZR0 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:HORVU4Hr1G085830 | EnsemblPlants:HORVU4Hr1G085830.4 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| PFAM:PF00069 | PIRSF:PIRSF000654 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 |
| PANTHER:PTHR24056:SF323 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| UniParc:UPI000B4747A8 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:632616073..632620880
Molecular Weight (calculated)
39225.5 Da
IEP (calculated)
9.031
GRAVY (calculated)
-0.370
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: PQWRQQQQQQ LRPPLPLSPA SPPRDPPPFP RSLLSPSHPP ISHARAAALC AQYEKVEKIG EGTYGVVYKA RDRATNETIA LKKIRLEQED EGVPSTAIRE
101: ISLLKEMQHR NIVKLHDVVH SEKRIWLVFE YLDLDLKKFM DSCPEFAKSP ALIKSYLYQI LRGVAYCHSH RVLHRDLKPQ NLLIDRRTNA LKLADFGLAR
201: AFGIPVRTFT HEVVTLWYRA PEILLGARQY STPVDVWSVG CIFAEMVNQK PLFPGDSEID ELFKIFRVLG TPNEQTWPGV SSLPDYKSAF PRWQDLATIV
301: PNLEPVGLDL LSKMLRFEPN KRITARQALE HEYFKDMEMV Q
101: ISLLKEMQHR NIVKLHDVVH SEKRIWLVFE YLDLDLKKFM DSCPEFAKSP ALIKSYLYQI LRGVAYCHSH RVLHRDLKPQ NLLIDRRTNA LKLADFGLAR
201: AFGIPVRTFT HEVVTLWYRA PEILLGARQY STPVDVWSVG CIFAEMVNQK PLFPGDSEID ELFKIFRVLG TPNEQTWPGV SSLPDYKSAF PRWQDLATIV
301: PNLEPVGLDL LSKMLRFEPN KRITARQALE HEYFKDMEMV Q
001: MDQYEKVEKI GEGTYGVVYK ARDKVTNETI ALKKIRLEQE DEGVPSTAIR EISLLKEMQH SNIVKLQDVV HSEKRLYLVF EYLDLDLKKH MDSTPDFSKD
101: LHMIKTYLYQ ILRGIAYCHS HRVLHRDLKP QNLLIDRRTN SLKLADFGLA RAFGIPVRTF THEVVTLWYR APEILLGSHH YSTPVDIWSV GCIFAEMISQ
201: KPLFPGDSEI DQLFKIFRIM GTPYEDTWRG VTSLPDYKSA FPKWKPTDLE TFVPNLDPDG VDLLSKMLLM DPTKRINARA ALEHEYFKDL GGMP
101: LHMIKTYLYQ ILRGIAYCHS HRVLHRDLKP QNLLIDRRTN SLKLADFGLA RAFGIPVRTF THEVVTLWYR APEILLGSHH YSTPVDIWSV GCIFAEMISQ
201: KPLFPGDSEI DQLFKIFRIM GTPYEDTWRG VTSLPDYKSA FPKWKPTDLE TFVPNLDPDG VDLLSKMLLM DPTKRINARA ALEHEYFKDL GGMP
Arabidopsis Description
CDKA-1Cyclin-dependent kinase A-1 [Source:UniProtKB/Swiss-Prot;Acc:P24100]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.