Factsheet for HORVU4Hr1G008270.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

cytosol 2
golgi 5
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G008270.1
HORVU4Hr1G021270.1
HORVU5Hr1G096370.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G39320.1	HORVU4Hr1G008270.1	AT1G26570.1	21798944
AT5G39320.1	HORVU4Hr1G021270.1	AT1G26570.1	21798944
AT5G39320.1	HORVU5Hr1G096370.1	AT1G26570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G050600.2	Wheat	extracellular	97.29	97.29
TraesCS4A01G264600.1	Wheat	extracellular	97.08	97.08
TraesCS4B01G050400.1	Wheat	extracellular	96.88	96.88
HORVU5Hr1G096370.1	Barley	extracellular, golgi	96.88	96.88
Os12t0443500-01	Rice	plasma membrane	93.54	93.54
Solyc02g088690.2.1	Tomato	nucleus	61.46	93.35
KXG37519	Sorghum	cytosol, extracellular	93.33	93.33
Zm00001d034072_P001	Maize	extracellular	93.12	93.12
Zm00001d013245_P001	Maize	plasma membrane	92.71	92.71
PGSC0003DMT400003666	Potato	extracellular, vacuole	90.83	90.64
HORVU4Hr1G021270.1	Barley	extracellular, golgi	89.79	89.79
PGSC0003DMT400064713	Potato	cytosol	86.46	89.44
Bra008695.1-P	Field mustard	extracellular, golgi	89.17	89.17
CDY26425	Canola	extracellular, golgi	88.96	88.96
KRH44990	Soybean	nucleus	88.96	88.96
KRH01262	Soybean	nucleus	88.96	88.96
AT5G15490.1	Thale cress	extracellular, vacuole	88.96	88.96
CDX69521	Canola	cytosol	68.33	88.89
Bra006303.1-P	Field mustard	extracellular, vacuole	88.54	88.54
Bra028430.1-P	Field mustard	cytosol, vacuole	88.33	88.33
CDX67427	Canola	cytosol, vacuole	88.33	88.33
Bra026264.1-P	Field mustard	extracellular, vacuole	45.42	88.26
CDY37001	Canola	cytosol, vacuole	88.12	88.12
AT3G29360.1	Thale cress	cytosol, vacuole	87.92	87.92
KRH75016	Soybean	endoplasmic reticulum	87.71	87.71
Bra028234.1-P	Field mustard	extracellular, vacuole	87.71	87.71
AT5G39320.1	Thale cress	extracellular	87.71	87.71
CDX74475	Canola	extracellular	47.08	87.6
KRG93627	Soybean	endoplasmic reticulum	87.5	87.5
KRH18404	Soybean	endoplasmic reticulum	87.5	87.5
KRH70872	Soybean	endoplasmic reticulum	87.5	87.5
PGSC0003DMT400087395	Potato	cytosol, golgi	86.88	86.88
Solyc03g115380.1.1	Tomato	nucleus, unclear	85.83	85.83
PGSC0003DMT400069038	Potato	cytosol	32.5	85.71
Solyc06g069550.1.1	Tomato	extracellular	84.79	84.79
PGSC0003DMT400083187	Potato	extracellular	84.17	84.17
Solyc02g067080.2.1	Tomato	extracellular	88.96	83.89
AT1G26570.1	Thale cress	cytosol, extracellular	82.08	81.91
Bra024708.1-P	Field mustard	cytosol, extracellular	81.04	80.87
CDY16166	Canola	cytosol	80.62	80.46
AT3G01010.1	Thale cress	cytosol	26.25	79.75
Bra025395.1-P	Field mustard	cytosol	15.62	78.95
KRH56847	Soybean	cytosol	78.12	78.45
KRH03109	Soybean	cytosol	78.12	78.29
CDX86369	Canola	cytosol	15.0	78.26
KRG89491	Soybean	cytosol	47.71	77.63
CDX70614	Canola	cytosol, mitochondrion, peroxisome, plastid	88.75	76.21
CDX90989	Canola	cytosol, golgi	86.88	76.09
KRH15845	Soybean	cytosol	52.29	75.83
CDX78633	Canola	cytosol	88.75	75.27
Solyc03g065350.1.1	Tomato	cytosol, extracellular, peroxisome	42.92	73.31
Bra023520.1-P	Field mustard	golgi	86.67	66.99
CDX85269	Canola	cytosol	30.21	65.91
CDX85549	Canola	cytosol	86.88	62.15
CDY15951	Canola	extracellular	7.08	47.22
Bra030352.1-P	Field mustard	extracellular	7.08	47.22

Protein Annotations

KEGG:00040+1.1.1.22	KEGG:00053+1.1.1.22	KEGG:00520+1.1.1.22	Gene3D:1.20.5.100	MapMan:3.13.3.1	Gene3D:3.40.50.720
InterPro:6-PGluconate_DH-like_C_sf	EMBL:AK353877	UniProt:F2CQH5	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003979	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616
GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:HORVU4Hr1G008270	EnsemblPlants:HORVU4Hr1G008270.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00984
PFAM:PF03720	PFAM:PF03721	PIRSF:PIRSF000124	PIRSF:PIRSF500133	PANTHER:PTHR11374	PANTHER:PTHR11374:SF30
SMART:SM00984	SUPFAM:SSF48179	SUPFAM:SSF51735	SUPFAM:SSF52413	TIGRFAMs:TIGR03026	InterPro:UDP-Glc/GDP-Man
InterPro:UDP-Glc/GDP-Man_DH_C	InterPro:UDP-Glc/GDP-Man_DH_C_sf	InterPro:UDP-Glc/GDP-Man_DH_N	InterPro:UDP-Glc/GDP-Man_DH_dimer	InterPro:UDPglc_DH_euk	UniParc:UPI000200463D

Description

UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F2CQH5]

Coordinates

chrchr4H:+:22383974..22387389

Molecular Weight (calculated)

52711.3 Da

IEP (calculated)

6.100

GRAVY (calculated)

-0.068

Length

480 amino acids

Sequence
(BLAST)

001: MVKICCIGAG YVGGPTMAVI AVKCPAIEVV VVDISKPRID AWNSDTLPIY EPGLDEVVKA CRGKNLFFST DVEKHVAEAD IIFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSKSD KIVVEKSTVP VKTAEAIEKI LTHNSKGINY QILSNPEFLA EGTAIDDLFK PDRVLIGGRE TPEGRKAVQA LKEVYANWVP
201: EENIITTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVSEVSYA IGKDSRIGPK FLNASVGFGG SCFQKDILNL VYICECNGLP EVANYWKQVI
301: KINDYQKSRF VNRVVSSMFN TVSGKKVAVL GFAFKKDTGD TRETPAIDVC KGLLGDKAQV SIYDPQVTED QIQRDLAMNK FDWDHPMHLQ PTSPSSVKQV
401: SVVWDAYEAT KGAHAVCILT EWNEFKELDY QKIFNNMQKP AFVFDGRNVV NADKLREIGF IVYSIGKPLD AWLKDMPAIA

Best Arabidopsis Sequence Match ( AT5G15490.1 )
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPSVEVA VVDISVPRIN AWNSDQLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFM PDRVLIGGRE TTEGFAAVKA LKDIYAQWVP
201: EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVSEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKARL SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV
401: SVAWDAYTAT KDAHGICILT EWDEFKKLDF QRIFENMQKP AFVFDGRNVV DADKLREIGF IVYSIGKPLD QWLKDMPALA

Arabidopsis Description

UGD3UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UJW9]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.