Factsheet for Bra026264.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
peroxisome 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024708.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G39320.1	Bra024708.1-P	AT1G26570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g088690.2.1	Tomato	nucleus	89.07	69.62
Bra025395.1-P	Field mustard	cytosol	26.32	68.42
Bra030352.1-P	Field mustard	extracellular	15.38	52.78
CDX67427	Canola	cytosol, vacuole	98.38	50.62
Bra028430.1-P	Field mustard	cytosol, vacuole	98.38	50.62
CDY37001	Canola	cytosol, vacuole	97.57	50.21
AT5G39320.1	Thale cress	extracellular	97.17	50.0
Bra028234.1-P	Field mustard	extracellular, vacuole	97.17	50.0
Solyc03g065350.1.1	Tomato	cytosol, extracellular, peroxisome	55.47	48.75
Bra008695.1-P	Field mustard	extracellular, golgi	89.88	46.25
KRH18404	Soybean	endoplasmic reticulum	89.88	46.25
KRH44990	Soybean	nucleus	89.88	46.25
Bra006303.1-P	Field mustard	extracellular, vacuole	89.88	46.25
KRG93627	Soybean	endoplasmic reticulum	89.47	46.04
PGSC0003DMT400003666	Potato	extracellular, vacuole	89.47	45.95
KRH01262	Soybean	nucleus	89.07	45.83
HORVU4Hr1G008270.1	Barley	extracellular, golgi	88.26	45.42
TraesCS4B01G050400.1	Wheat	extracellular	87.85	45.21
TraesCS5A01G394900.1	Wheat	extracellular, golgi	87.85	45.21
TraesCS5B01G399800.1	Wheat	unclear	87.85	45.21
TraesCS5D01G404300.1	Wheat	golgi	87.85	45.21
KXG37519	Sorghum	cytosol, extracellular	87.85	45.21
Zm00001d034072_P001	Maize	extracellular	87.45	45.0
HORVU5Hr1G096370.1	Barley	extracellular, golgi	87.45	45.0
TraesCS4D01G050600.2	Wheat	extracellular	87.45	45.0
TraesCS4A01G264600.1	Wheat	extracellular	87.45	45.0
Zm00001d013245_P001	Maize	plasma membrane	87.45	45.0
Os12t0443600-01	Rice	extracellular	87.45	45.0
EER95293	Sorghum	extracellular, vacuole	87.04	44.79
Os12t0443500-01	Rice	plasma membrane	87.04	44.79
Os03t0757900-01	Rice	plasma membrane	86.64	44.58
HORVU4Hr1G021270.1	Barley	extracellular, golgi	86.23	44.38
TraesCS4D01G113800.1	Wheat	extracellular, golgi	86.23	44.38
TraesCS4B01G116200.1	Wheat	extracellular, golgi	86.23	44.38
TraesCS4A01G199200.1	Wheat	extracellular, golgi	86.23	44.38
PGSC0003DMT400064713	Potato	cytosol	81.78	43.53
Bra024708.1-P	Field mustard	cytosol, extracellular	84.62	43.45
TraesCS4B01G077100.1	Wheat	cytosol, vacuole	83.81	43.12
Solyc02g067080.2.1	Tomato	extracellular	88.66	43.03
Os03t0604200-01	Rice	plasma membrane	83.81	42.95
GSMUA_Achr4P14320_001	Banana	cytosol	71.26	42.93
TraesCS4A01G237900.1	Wheat	cytosol, vacuole	83.4	42.83
TraesCS4D01G075600.1	Wheat	cytosol, vacuole	83.4	42.83
Zm00001d033188_P001	Maize	extracellular	83.0	42.62
Os03t0425600-00	Rice	plasma membrane	81.38	41.79
KXG38049	Sorghum	endoplasmic reticulum, extracellular	83.4	41.28
GSMUA_Achr4P03270_001	Banana	cytosol	60.73	39.79
GSMUA_Achr3P30310_001	Banana	cytosol	60.73	39.58
GSMUA_Achr4P07270_001	Banana	extracellular, golgi	59.51	39.1
GSMUA_Achr3P18750_001	Banana	extracellular, golgi	56.68	38.89
GSMUA_Achr11P...	Banana	cytosol	59.51	38.18
GSMUA_Achr10P...	Banana	cytosol	57.89	38.03
Os04t0581600-01	Rice	cytosol, mitochondrion, peroxisome	33.6	37.9
GSMUA_Achr6P11090_001	Banana	cytosol	55.87	37.4
Bra023520.1-P	Field mustard	golgi	89.47	35.59
GSMUA_Achr6P23920_001	Banana	cytosol	40.08	30.28
Os03t0147150-00	Rice	plasma membrane	26.72	27.05
GSMUA_Achr4P10820_001	Banana	plasma membrane	56.28	18.71
PGSC0003DMT400069038	Potato	cytosol	3.24	4.4
GSMUA_Achr7P26580_001	Banana	cytosol	0.4	0.77

Protein Annotations

Gene3D:1.20.5.100	MapMan:3.13.3.1	Gene3D:3.40.50.720	InterPro:6-PGluconate_DH-like_C_sf	EnsemblPlantsGene:Bra026264	EnsemblPlants:Bra026264.1
EnsemblPlants:Bra026264.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	UniProt:M4EBV5	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00984	PFAM:PF03721	PANTHER:PTHR11374	PANTHER:PTHR11374:SF30	SUPFAM:SSF48179	SUPFAM:SSF51735
TIGRFAMs:TIGR03026	InterPro:UDP-Glc/GDP-Man	InterPro:UDP-Glc/GDP-Man_DH_N	InterPro:UDP-Glc/GDP-Man_DH_dimer	UniParc:UPI0002544127	:

Description

AT5G39320 (E=7e-135) | UDP-glucose 6-dehydrogenase, putative

Coordinates

chrA01:-:10311628..10312371

Molecular Weight (calculated)

26633.1 Da

IEP (calculated)

4.957

GRAVY (calculated)

0.143

Length

247 amino acids

Sequence
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPHIEVA VVDISVPRIN AWNSDQLPIY EPGLEDIVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTTGLGAGKA
101: ADLTYWESAA RMIADVSASD KIVVEKSTVP VKTAEAIEKI LMHNSKGIKF QILSNPEFLA EGTAIADLFN PDRVLIGGRE TPEGFKAVQT LKEVYANWVP
201: EGQIITTNLW SAELSKLAAN AFLAQRISSV NAMSALCEST GADCFDI

Best Arabidopsis Sequence Match ( AT1G26570.1 )
(BLAST)

001: MVKICCIGAG YVGGPTMAVM ALKCPEIEVV VVDISEPRIN AWNSDRLPIY EPGLEDVVKQ CRGKNLFFST DVEKHVFESD IVFVSVNTPT KTQGLGAGKA
101: ADLTYWESAA RMIADVSKSS KIVVEKSTVP VRTAEAIEKI LTHNSKGIEF QILSNPEFLA EGTAIKDLYN PDRVLIGGRD TAAGQKAIKA LRDVYAHWVP
201: VEQIICTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVAHA VGTDTRIGPK FLNASVGFGG SCFQKDILNL IYICECNGLP EAANYWKQVV
301: KVNDYQKIRF ANRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC NRLVADKAKL SIYDPQVLEE QIRRDLSMAR FDWDHPVPLQ QIKAEGISEQ
401: VNVVSDAYEA TKDAHGLCVL TEWDEFKSLD FKKIFDNMQK PAFVFDGRNV VDAVKLREIG FIVYSIGKPL DSWLKDMPAV A

Arabidopsis Description

UGD1UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178WCI2]
SUBAcon: [extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.