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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • golgi 1
  • cytosol 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, golgi, mitochondrion, plastid
BaCelLo:plastid
EpiLoc:golgi
MultiLoc:cytosol
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr3P18750_001
GSMUA_Achr3P30310_001
GSMUA_Achr4P03270_001
GSMUA_Achr4P07270_001
GSMUA_Achr4P10820_001
GSMUA_Achr4P14320_001
GSMUA_Achr6P11090_001
GSMUA_Achr6P23920_001
GSMUA_Achr7P26580_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G39320.1 GSMUA_Achr10P... AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr11P... AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr3P18750_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr3P30310_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr4P03270_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr4P07270_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr4P10820_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr4P14320_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr6P11090_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr6P23920_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr7P26580_001 AT1G26570.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr7P26580_001 Banana cytosol 36.39 91.54
GSMUA_Achr3P18750_001 Banana extracellular, golgi 85.63 77.78
GSMUA_Achr4P07270_001 Banana extracellular, golgi 88.99 77.39
GSMUA_Achr4P03270_001 Banana cytosol 85.93 74.54
GSMUA_Achr3P30310_001 Banana cytosol 84.71 73.09
GSMUA_Achr6P11090_001 Banana cytosol 80.43 71.27
PGSC0003DMT400069038 Potato cytosol 38.84 69.78
GSMUA_Achr10P... Banana cytosol 79.82 69.41
GSMUA_Achr4P14320_001 Banana cytosol 86.24 68.78
GSMUA_Achr11P... Banana cytosol 79.82 67.79
AT3G01010.1 Thale cress cytosol 32.42 67.09
CDX69521 Canola cytosol 68.81 60.98
EER95293 Sorghum extracellular, vacuole 88.38 60.21
TraesCS4B01G116200.1 Wheat extracellular, golgi 87.16 59.38
TraesCS4A01G199200.1 Wheat extracellular, golgi 87.16 59.38
HORVU4Hr1G021270.1 Barley extracellular, golgi 87.16 59.38
TraesCS4D01G113800.1 Wheat extracellular, golgi 86.85 59.17
KRG93627 Soybean endoplasmic reticulum 85.32 58.12
Bra008695.1-P Field mustard extracellular, golgi 85.32 58.12
Os03t0425600-00 Rice plasma membrane 85.32 58.0
KRH44990 Soybean nucleus 85.02 57.92
KRH18404 Soybean endoplasmic reticulum 85.02 57.92
CDY26425 Canola extracellular, golgi 85.02 57.92
AT3G29360.1 Thale cress cytosol, vacuole 84.71 57.71
Bra006303.1-P Field mustard extracellular, vacuole 84.71 57.71
PGSC0003DMT400087395 Potato cytosol, golgi 84.4 57.5
KRH70872 Soybean endoplasmic reticulum 84.4 57.5
KRH01262 Soybean nucleus 84.4 57.5
Solyc06g069550.1.1 Tomato extracellular 84.1 57.29
KRH75016 Soybean endoplasmic reticulum 84.1 57.29
AT5G15490.1 Thale cress extracellular, vacuole 84.1 57.29
PGSC0003DMT400064713 Potato cytosol 81.04 57.11
CDY37001 Canola cytosol, vacuole 83.79 57.08
Bra028430.1-P Field mustard cytosol, vacuole 83.79 57.08
CDX67427 Canola cytosol, vacuole 83.79 57.08
PGSC0003DMT400083187 Potato extracellular 83.79 57.08
PGSC0003DMT400003666 Potato extracellular, vacuole 83.79 56.96
Bra028234.1-P Field mustard extracellular, vacuole 83.49 56.88
AT5G39320.1 Thale cress extracellular 83.49 56.88
Solyc03g115380.1.1 Tomato nucleus, unclear 82.87 56.46
KRG89491 Soybean cytosol 50.76 56.27
AT1G26570.1 Thale cress cytosol, extracellular 80.12 54.47
Solyc02g067080.2.1 Tomato extracellular 84.1 54.03
Bra024708.1-P Field mustard cytosol, extracellular 78.59 53.43
CDY16166 Canola cytosol 78.29 53.22
KRH15845 Soybean cytosol 53.52 52.87
KRH56847 Soybean cytosol 75.23 51.46
Solyc02g088690.2.1 Tomato nucleus 49.54 51.27
KRH03109 Soybean cytosol 74.62 50.94
CDX70614 Canola cytosol, mitochondrion, peroxisome, plastid 85.02 49.73
CDX78633 Canola cytosol 85.02 49.12
CDX90989 Canola cytosol, golgi 82.26 49.09
Bra023520.1-P Field mustard golgi 82.26 43.32
CDX74475 Canola extracellular 33.03 41.86
CDX85549 Canola cytosol 82.57 40.24
Bra026264.1-P Field mustard extracellular, vacuole 30.28 40.08
Solyc03g065350.1.1 Tomato cytosol, extracellular, peroxisome 32.72 38.08
GSMUA_Achr4P10820_001 Banana plasma membrane 85.02 37.42
CDX85269 Canola cytosol 23.85 35.45
Bra025395.1-P Field mustard cytosol 9.79 33.68
CDX86369 Canola cytosol 8.87 31.52
CDY15951 Canola extracellular 3.36 15.28
Bra030352.1-P Field mustard extracellular 3.36 15.28
Protein Annotations
MapMan:3.13.3.1Gene3D:3.40.50.720InterPro:6-PGluconate_DH-like_C_sfGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016616GO:GO:0051287GO:GO:0055114
EnsemblPlantsGene:GSMUA_Achr6G23920_001EnsemblPlants:GSMUA_Achr6P23920_001EnsemblPlants:GSMUA_Achr6T23920_001UniProt:M0T9P0InterPro:NAD(P)-bd_dom_sfPFAM:PF00984
PFAM:PF03720PFAM:PF03721PANTHER:PTHR11374PANTHER:PTHR11374:SF30SMART:SM00984SUPFAM:SSF48179
SUPFAM:SSF51735SUPFAM:SSF52413InterPro:UDP-Glc/GDP-Man_DH_CInterPro:UDP-Glc/GDP-Man_DH_C_sfInterPro:UDP-Glc/GDP-Man_DH_NInterPro:UDP-Glc/GDP-Man_DH_dimer
UniParc:UPI0002964C62:::::
Description
UDP-glucose 6-dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr6G23920_001]
Coordinates
chr6:+:24290704..24292343
Molecular Weight (calculated)
35963.4 Da
IEP (calculated)
8.118
GRAVY (calculated)
-0.026
Length
327 amino acids
Sequence
(BLAST)
001: MVKICCLGAG YKCRGRNLFF STEIEKHIGQ ADIVFVSVNT PTKTRGLGAG MAADLTYWES AARMIADVAK SDKIILSNPE FLAEGTAIQD LFNPDRRISS
101: VNAISALCEA TGADVAEVAY SVGKDTRIGP KFLSASVGFG GSCFQKDILS LVYICECNGL PEVASYWKDV IKVNDYQKSR FVNRVVSSMF NTVSEKKIAV
201: LGFAFKKDTG DTRETPAIDV CKGLLGDKAK ISIYDPQPTS PTAVKQVTVT WDAYEATKGA HGVCILTEWD EFRKLDYVKI YENMQKPAFI FDGRNVIDPQ
301: KLRKIGFIVF SIGKPLDPWL KDMPAVV
Best Arabidopsis Sequence Match ( AT1G26570.1 )
(BLAST)
001: MVKICCIGAG YVGGPTMAVM ALKCPEIEVV VVDISEPRIN AWNSDRLPIY EPGLEDVVKQ CRGKNLFFST DVEKHVFESD IVFVSVNTPT KTQGLGAGKA
101: ADLTYWESAA RMIADVSKSS KIVVEKSTVP VRTAEAIEKI LTHNSKGIEF QILSNPEFLA EGTAIKDLYN PDRVLIGGRD TAAGQKAIKA LRDVYAHWVP
201: VEQIICTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVAHA VGTDTRIGPK FLNASVGFGG SCFQKDILNL IYICECNGLP EAANYWKQVV
301: KVNDYQKIRF ANRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC NRLVADKAKL SIYDPQVLEE QIRRDLSMAR FDWDHPVPLQ QIKAEGISEQ
401: VNVVSDAYEA TKDAHGLCVL TEWDEFKSLD FKKIFDNMQK PAFVFDGRNV VDAVKLREIG FIVYSIGKPL DSWLKDMPAV A
Arabidopsis Description
UGD1UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178WCI2]
SUBAcon: [extracellular,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.