Factsheet for PGSC0003DMT400003666

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

cytosol 2
golgi 4
extracellular 4
plasma membrane 3
endoplasmic reticulum 3
vacuole 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g088690.2.1	Tomato	nucleus	64.66	98.42
PGSC0003DMT400064713	Potato	cytosol	90.02	93.32
TraesCS5B01G399800.1	Wheat	unclear	91.06	91.25
TraesCS5D01G404300.1	Wheat	golgi	90.85	91.04
TraesCS5A01G394900.1	Wheat	extracellular, golgi	90.64	90.83
HORVU4Hr1G008270.1	Barley	extracellular, golgi	90.64	90.83
Zm00001d034072_P001	Maize	extracellular	90.44	90.62
KXG37519	Sorghum	cytosol, extracellular	90.44	90.62
GSMUA_Achr4P03270_001	Banana	cytosol	70.89	90.45
KRH44990	Soybean	nucleus	90.23	90.42
HORVU5Hr1G096370.1	Barley	extracellular, golgi	90.23	90.42
AT3G29360.1	Thale cress	cytosol, vacuole	90.02	90.21
Zm00001d013245_P001	Maize	plasma membrane	90.02	90.21
KRH01262	Soybean	nucleus	90.02	90.21
CDY26425	Canola	extracellular, golgi	89.81	90.0
TraesCS4B01G050400.1	Wheat	extracellular	89.61	89.79
Bra028430.1-P	Field mustard	cytosol, vacuole	89.61	89.79
CDX67427	Canola	cytosol, vacuole	89.61	89.79
Os03t0757900-01	Rice	plasma membrane	89.61	89.79
Os12t0443500-01	Rice	plasma membrane	89.61	89.79
Os12t0443600-01	Rice	extracellular	89.61	89.79
TraesCS4D01G050600.2	Wheat	extracellular	89.61	89.79
TraesCS4A01G264600.1	Wheat	extracellular	89.61	89.79
AT5G15490.1	Thale cress	extracellular, vacuole	89.61	89.79
PGSC0003DMT400087395	Potato	cytosol, golgi	89.4	89.58
Bra028234.1-P	Field mustard	extracellular, vacuole	89.4	89.58
Bra008695.1-P	Field mustard	extracellular, golgi	89.4	89.58
Bra026264.1-P	Field mustard	extracellular, vacuole	45.95	89.47
CDY37001	Canola	cytosol, vacuole	89.19	89.38
KRH18404	Soybean	endoplasmic reticulum	89.19	89.38
AT5G39320.1	Thale cress	extracellular	88.98	89.17
TraesCS4A01G199200.1	Wheat	extracellular, golgi	88.77	88.96
HORVU4Hr1G021270.1	Barley	extracellular, golgi	88.77	88.96
KRG93627	Soybean	endoplasmic reticulum	88.77	88.96
EER95293	Sorghum	extracellular, vacuole	88.77	88.96
GSMUA_Achr6P11090_001	Banana	cytosol	68.19	88.89
GSMUA_Achr4P14320_001	Banana	cytosol	75.68	88.78
CDX74475	Canola	extracellular	47.61	88.76
TraesCS4D01G113800.1	Wheat	extracellular, golgi	88.57	88.75
TraesCS4B01G116200.1	Wheat	extracellular, golgi	88.57	88.75
Bra006303.1-P	Field mustard	extracellular, vacuole	88.57	88.75
GSMUA_Achr3P30310_001	Banana	cytosol	69.85	88.65
CDX69521	Canola	cytosol	67.36	87.8
GSMUA_Achr10P...	Banana	cytosol	68.4	87.5
PGSC0003DMT400069038	Potato	cytosol	33.06	87.36
GSMUA_Achr4P07270_001	Banana	extracellular, golgi	67.98	86.97
GSMUA_Achr11P...	Banana	cytosol	69.44	86.75
PGSC0003DMT400083187	Potato	extracellular	86.28	86.46
Os03t0425600-00	Rice	plasma membrane	84.82	84.82
GSMUA_Achr3P18750_001	Banana	extracellular, golgi	63.2	84.44
GSMUA_Achr6P23920_001	Banana	cytosol	56.96	83.79
Os03t0604200-01	Rice	plasma membrane	82.95	82.78
Bra025395.1-P	Field mustard	cytosol	16.22	82.11
TraesCS4B01G077100.1	Wheat	cytosol, vacuole	81.91	82.08
TraesCS4D01G075600.1	Wheat	cytosol, vacuole	81.7	81.7
CDX86369	Canola	cytosol	15.59	81.52
TraesCS4A01G237900.1	Wheat	cytosol, vacuole	81.29	81.29
Zm00001d033188_P001	Maize	extracellular	80.46	80.46
GSMUA_Achr7P26580_001	Banana	cytosol	21.62	80.0
AT3G01010.1	Thale cress	cytosol	25.99	79.11
KXG38049	Sorghum	endoplasmic reticulum, extracellular	80.04	77.15
CDX90989	Canola	cytosol, golgi	87.53	76.82
CDX70614	Canola	cytosol, mitochondrion, peroxisome, plastid	88.77	76.39
CDX78633	Canola	cytosol	88.77	75.44
CDX85269	Canola	cytosol	31.18	68.18
Bra023520.1-P	Field mustard	golgi	87.53	67.79
CDX85549	Canola	cytosol	87.73	62.89
Os04t0581600-01	Rice	cytosol, mitochondrion, peroxisome	20.37	44.75
GSMUA_Achr4P10820_001	Banana	plasma membrane	65.9	42.66
Os03t0147150-00	Rice	plasma membrane	17.46	34.43

Protein Annotations

KEGG:00040+1.1.1.22	KEGG:00053+1.1.1.22	KEGG:00520+1.1.1.22	Gene3D:1.20.5.100	EntrezGene:102590919	MapMan:3.13.3.1
Gene3D:3.40.50.720	InterPro:6-PGluconate_DH-like_C_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003979
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	UniProt:M0ZM42	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00984	PFAM:PF03720	PFAM:PF03721
EnsemblPlantsGene:PGSC0003DMG400001448	PGSC:PGSC0003DMG400001448	EnsemblPlants:PGSC0003DMT400003666	PIRSF:PIRSF000124	PIRSF:PIRSF500133	PANTHER:PTHR11374
PANTHER:PTHR11374:SF30	SMART:SM00984	SUPFAM:SSF48179	SUPFAM:SSF51735	SUPFAM:SSF52413	TIGRFAMs:TIGR03026
InterPro:UDP-Glc/GDP-Man	InterPro:UDP-Glc/GDP-Man_DH_C	InterPro:UDP-Glc/GDP-Man_DH_C_sf	InterPro:UDP-Glc/GDP-Man_DH_N	InterPro:UDP-Glc/GDP-Man_DH_dimer	InterPro:UDPglc_DH_euk
UniParc:UPI0002957275	RefSeq:XP_006338384.1	:	:	:	:

Description

UDP-glucose dehydrogenase 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400001448]

Coordinates

chr2:+:45703124..45706234

Molecular Weight (calculated)

52817.6 Da

IEP (calculated)

6.621

GRAVY (calculated)

-0.058

Length

481 amino acids

Sequence
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPTIEVV VVDISVPRIT AWNSDTLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVHEAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSKSD KIVVEKSTVP VKTAEAIEKI LTHNSKGINF QILSNPEFLA EGTAIEDLFK PDRVLIGGRE TPGGQKAIQA LKDVYAHWVP
201: EGNIITTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVTQVAYA VGKDSRIGPK FLNASVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKSRF VNRVVASMFN TVSNKKVAIL GFAFKKDTGD TRETPAIDVC KGLMGDNAKL SIYDPQVQED QIQRDLSMKK FDWDHPLHLQ PMSPTSVKQQ
401: VSVSMDAYGA TKDAHAVCIL TEWDEFKTLD FQKIYDNMQK PAFVFDGRNV VNADKLREIG FIVYSIGKPL DAWLKDMPAV A

Best Arabidopsis Sequence Match ( AT3G29360.2 )
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPDVEVA VVDISVPRIN AWNSDTLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIKDLFN PDRVLIGGRE TPEGFKAVQT LKNVYAHWVP
201: EGQIITTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVSYA VGTDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKSRF VNRVVSSMFN SVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLEDKARL SIYDPQVTED QIQRDLSMNK FDWDHPLHLQ PMSPTTVKQV
401: TVTWDAYEAT KDAHGICIMT EWDEFKNLDF QKIFDNMQKP AFVFDGRNIM NLQKLREIGF IVYSIGKPLD DWLKDMPAVA

Arabidopsis Description

UGD2UDP-glucose 6-dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIA8]
SUBAcon: [cytosol,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.