Factsheet for GSMUA_Achr4P03270_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
golgi 1
cytosol 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr3P18750_001
GSMUA_Achr3P30310_001
GSMUA_Achr4P03270_001
GSMUA_Achr4P07270_001
GSMUA_Achr4P10820_001
GSMUA_Achr4P14320_001
GSMUA_Achr6P11090_001
GSMUA_Achr6P23920_001
GSMUA_Achr7P26580_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G39320.1	GSMUA_Achr10P...	AT1G26570.1	21798944
AT5G39320.1	GSMUA_Achr11P...	AT1G26570.1	21798944
AT5G39320.1	GSMUA_Achr3P18750_001	AT1G26570.1	21798944
AT5G39320.1	GSMUA_Achr3P30310_001	AT1G26570.1	21798944
AT5G39320.1	GSMUA_Achr4P03270_001	AT1G26570.1	21798944
AT5G39320.1	GSMUA_Achr4P07270_001	AT1G26570.1	21798944
AT5G39320.1	GSMUA_Achr4P10820_001	AT1G26570.1	21798944
AT5G39320.1	GSMUA_Achr4P14320_001	AT1G26570.1	21798944
AT5G39320.1	GSMUA_Achr6P11090_001	AT1G26570.1	21798944
AT5G39320.1	GSMUA_Achr6P23920_001	AT1G26570.1	21798944
AT5G39320.1	GSMUA_Achr7P26580_001	AT1G26570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P30310_001	Banana	cytosol	94.16	93.67
GSMUA_Achr7P26580_001	Banana	cytosol	31.03	90.0
GSMUA_Achr6P11090_001	Banana	cytosol	88.06	89.97
GSMUA_Achr10P...	Banana	cytosol	89.12	89.36
GSMUA_Achr6P23920_001	Banana	cytosol	74.54	85.93
GSMUA_Achr4P14320_001	Banana	cytosol	90.45	83.17
GSMUA_Achr4P07270_001	Banana	extracellular, golgi	78.25	78.46
GSMUA_Achr11P...	Banana	cytosol	79.31	77.66
CDX69521	Canola	cytosol	74.01	75.61
GSMUA_Achr3P18750_001	Banana	extracellular, golgi	70.56	73.89
EER95293	Sorghum	extracellular, vacuole	93.1	73.12
PGSC0003DMT400069038	Potato	cytosol	35.01	72.53
TraesCS4B01G116200.1	Wheat	extracellular, golgi	92.04	72.29
TraesCS4A01G199200.1	Wheat	extracellular, golgi	92.04	72.29
HORVU4Hr1G021270.1	Barley	extracellular, golgi	92.04	72.29
TraesCS4D01G113800.1	Wheat	extracellular, golgi	91.78	72.08
PGSC0003DMT400003666	Potato	extracellular, vacuole	90.45	70.89
Bra008695.1-P	Field mustard	extracellular, golgi	89.66	70.42
CDY26425	Canola	extracellular, golgi	89.66	70.42
PGSC0003DMT400064713	Potato	cytosol	86.47	70.26
Solyc02g088690.2.1	Tomato	nucleus	58.89	70.25
AT5G15490.1	Thale cress	extracellular, vacuole	89.39	70.21
PGSC0003DMT400087395	Potato	cytosol, golgi	89.39	70.21
KRH44990	Soybean	nucleus	89.12	70.0
Bra006303.1-P	Field mustard	extracellular, vacuole	89.12	70.0
KRH18404	Soybean	endoplasmic reticulum	88.86	69.79
KRH01262	Soybean	nucleus	88.59	69.58
KRG93627	Soybean	endoplasmic reticulum	88.33	69.38
Solyc03g115380.1.1	Tomato	nucleus, unclear	88.06	69.17
Solyc06g069550.1.1	Tomato	extracellular	88.06	69.17
AT3G29360.1	Thale cress	cytosol, vacuole	88.06	69.17
Os03t0425600-00	Rice	plasma membrane	88.06	69.02
CDY37001	Canola	cytosol, vacuole	87.8	68.96
CDX67427	Canola	cytosol, vacuole	87.53	68.75
Bra028430.1-P	Field mustard	cytosol, vacuole	87.53	68.75
PGSC0003DMT400083187	Potato	extracellular	87.53	68.75
KRH70872	Soybean	endoplasmic reticulum	87.27	68.54
Bra028234.1-P	Field mustard	extracellular, vacuole	87.27	68.54
AT3G01010.1	Thale cress	cytosol	28.65	68.35
AT5G39320.1	Thale cress	extracellular	87.0	68.33
KRH75016	Soybean	endoplasmic reticulum	87.0	68.33
KRH15845	Soybean	cytosol	59.15	67.37
Solyc02g067080.2.1	Tomato	extracellular	89.12	66.01
AT1G26570.1	Thale cress	cytosol, extracellular	84.08	65.9
Bra024708.1-P	Field mustard	cytosol, extracellular	83.02	65.07
CDY16166	Canola	cytosol	82.76	64.86
KRG89491	Soybean	cytosol	49.87	63.73
KRH56847	Soybean	cytosol	80.37	63.39
KRH03109	Soybean	cytosol	79.31	62.42
CDX74475	Canola	extracellular	42.18	61.63
Bra026264.1-P	Field mustard	extracellular, vacuole	39.79	60.73
CDX70614	Canola	cytosol, mitochondrion, peroxisome, plastid	89.39	60.29
CDX78633	Canola	cytosol	89.39	59.54
CDX90989	Canola	cytosol, golgi	86.47	59.49
Solyc03g065350.1.1	Tomato	cytosol, extracellular, peroxisome	41.11	55.16
Bra023520.1-P	Field mustard	golgi	86.47	52.5
CDX85549	Canola	cytosol	86.74	48.73
GSMUA_Achr4P10820_001	Banana	plasma membrane	79.05	40.11
CDX85269	Canola	cytosol	22.28	38.18
Bra025395.1-P	Field mustard	cytosol	9.02	35.79
CDX86369	Canola	cytosol	8.49	34.78
Bra030352.1-P	Field mustard	extracellular	3.18	16.67
CDY15951	Canola	extracellular	3.18	16.67

Protein Annotations

KEGG:00040+1.1.1.22	KEGG:00053+1.1.1.22	KEGG:00520+1.1.1.22	Gene3D:1.20.5.100	MapMan:3.13.3.1	Gene3D:3.40.50.720
InterPro:6-PGluconate_DH-like_C_sf	GO:GO:0000166	GO:GO:0000271	GO:GO:0003674	GO:GO:0003824	GO:GO:0003979
GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016491
GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr4G03270_001	EnsemblPlants:GSMUA_Achr4P03270_001	EnsemblPlants:GSMUA_Achr4T03270_001
UniProt:M0SKP4	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00984	PFAM:PF03720	PFAM:PF03721	PIRSF:PIRSF000124
PIRSF:PIRSF500134	PANTHER:PTHR11374	PANTHER:PTHR11374:SF30	SMART:SM00984	SUPFAM:SSF48179	SUPFAM:SSF51735
SUPFAM:SSF52413	TIGRFAMs:TIGR03026	InterPro:UDP-Glc/GDP-Man	InterPro:UDP-Glc/GDP-Man_DH_C	InterPro:UDP-Glc/GDP-Man_DH_C_sf	InterPro:UDP-Glc/GDP-Man_DH_N
InterPro:UDP-Glc/GDP-Man_DH_dimer	InterPro:UDPglc_DH_bac	UniParc:UPI0002947F1A	:	:	:

Description

UDP-glucose 6-dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr4G03270_001]

Coordinates

chr4:+:2636442..2638107

Molecular Weight (calculated)

41467.8 Da

IEP (calculated)

7.588

GRAVY (calculated)

-0.042

Length

377 amino acids

Sequence
(BLAST)

001: MVKICCIGAG YQCRGRNLFF STEVEKHVCE ADIIFVSVNT PTKTRGLGAG KAADLTYWES AARMIADVSK SDKIVVEKST VPVKTAEAIE KILTHNSKGI
101: NYQILSNPEF LAEEVYANWV PEDRIITTNL WSAELSKLAA NAFLAQRISS VNAISALCEA TGANVAEVAY AVGKDSRIGP KFLNASVGFG GSCFQKDILN
201: LVYICECNGL PEVANYWKQV IKINDYQKSR FVNRVVSSMF NTVAGKKIAV LGFAFKKDTG DTRETPAIDV CKGLLGDKAK ISIYDPQPMS PTAVKEVTVT
301: WDAYEATKGA HGVCILTEWD EFKTLDYSKI YQNMQKPAFV FDGRNVVDSD KLREIGFIVY SIGKPLDPWL KDMPAVA

Best Arabidopsis Sequence Match ( AT5G15490.1 )
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPSVEVA VVDISVPRIN AWNSDQLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFM PDRVLIGGRE TTEGFAAVKA LKDIYAQWVP
201: EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVSEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKARL SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV
401: SVAWDAYTAT KDAHGICILT EWDEFKKLDF QRIFENMQKP AFVFDGRNVV DADKLREIGF IVYSIGKPLD QWLKDMPALA

Arabidopsis Description

UGD3UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UJW9]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.