Skip to main content
crop-pal logo
Soybean
Search for another protein from :
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 3
  • golgi 4
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, plastid, secretory
BaCelLo:cytosol
EpiLoc:golgi
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:vacuole
 nucleus: 21132161
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH70872 Soybean endoplasmic reticulum 99.17 99.17
VIT_01s0011g00690.t01 Wine grape cytosol, extracellular 90.42 90.42
KRG93627 Soybean endoplasmic reticulum 88.96 88.96
TraesCS5B01G399800.1 Wheat unclear 88.75 88.75
KRH44990 Soybean nucleus 88.75 88.75
TraesCS5D01G404300.1 Wheat golgi 88.54 88.54
TraesCS5A01G394900.1 Wheat extracellular, golgi 88.33 88.33
TraesCS4A01G199200.1 Wheat extracellular, golgi 88.33 88.33
KXG37519 Sorghum cytosol, extracellular 88.33 88.33
KRH18404 Soybean endoplasmic reticulum 88.33 88.33
KRH01262 Soybean nucleus 88.33 88.33
HORVU5Hr1G096370.1 Barley extracellular, golgi 88.33 88.33
HORVU4Hr1G021270.1 Barley extracellular, golgi 88.33 88.33
Zm00001d034072_P001 Maize extracellular 88.12 88.12
TraesCS4D01G113800.1 Wheat extracellular, golgi 88.12 88.12
TraesCS4B01G116200.1 Wheat extracellular, golgi 88.12 88.12
Zm00001d013245_P001 Maize plasma membrane 87.92 87.92
HORVU4Hr1G008270.1 Barley extracellular, golgi 87.71 87.71
Os03t0757900-01 Rice plasma membrane 87.71 87.71
Os12t0443500-01 Rice plasma membrane 87.71 87.71
TraesCS4B01G050400.1 Wheat extracellular 87.5 87.5
EER95293 Sorghum extracellular, vacuole 87.5 87.5
TraesCS4A01G264600.1 Wheat extracellular 87.29 87.29
Os12t0443600-01 Rice extracellular 87.08 87.08
GSMUA_Achr4P14320_001 Banana cytosol 74.38 87.07
GSMUA_Achr4P03270_001 Banana cytosol 68.33 87.0
TraesCS4D01G050600.2 Wheat extracellular 86.88 86.88
GSMUA_Achr3P30310_001 Banana cytosol 68.54 86.81
GSMUA_Achr6P11090_001 Banana cytosol 66.04 85.91
GSMUA_Achr11P... Banana cytosol 68.75 85.71
GSMUA_Achr10P... Banana cytosol 67.08 85.64
GSMUA_Achr4P07270_001 Banana extracellular, golgi 66.67 85.11
AT1G26570.1 Thale cress cytosol, extracellular 84.79 84.62
GSMUA_Achr3P18750_001 Banana extracellular, golgi 63.12 84.17
GSMUA_Achr6P23920_001 Banana cytosol 57.29 84.1
GSMUA_Achr7P26580_001 Banana cytosol 22.5 83.08
Os03t0425600-00 Rice plasma membrane 83.12 82.95
Bra024708.1-P Field mustard cytosol, extracellular 83.12 82.95
KRG89491 Soybean cytosol 50.83 82.71
CDY16166 Canola cytosol 82.71 82.54
Os03t0604200-01 Rice plasma membrane 81.88 81.54
TraesCS4D01G075600.1 Wheat cytosol, vacuole 81.25 81.08
TraesCS4B01G077100.1 Wheat cytosol, vacuole 81.04 81.04
TraesCS4A01G237900.1 Wheat cytosol, vacuole 80.83 80.67
Zm00001d033188_P001 Maize extracellular 80.83 80.67
KRH03109 Soybean cytosol 79.17 79.33
KRH56847 Soybean cytosol 78.33 78.66
KXG38049 Sorghum endoplasmic reticulum, extracellular 80.42 77.35
KRH15845 Soybean cytosol 52.71 76.44
Os04t0581600-01 Rice cytosol, mitochondrion, peroxisome 20.0 43.84
GSMUA_Achr4P10820_001 Banana plasma membrane 65.0 41.99
Os03t0147150-00 Rice plasma membrane 17.08 33.61
Protein Annotations
KEGG:00040+1.1.1.22KEGG:00053+1.1.1.22KEGG:00520+1.1.1.22Gene3D:1.20.5.100EntrezGene:100820448MapMan:3.13.3.1
Gene3D:3.40.50.720InterPro:6-PGluconate_DH-like_C_sfEMBL:ACUP02000105EnsemblPlantsGene:GLYMA_01G057100GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0003979GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0005737GO:GO:0005829GO:GO:0006024GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0016491GO:GO:0016616GO:GO:0051287GO:GO:0055114UniProt:I1J5Y9
EnsemblPlants:KRH75016ProteinID:KRH75016ProteinID:KRH75016.1InterPro:NAD(P)-bd_dom_sfPFAM:PF00984PFAM:PF03720
PFAM:PF03721PIRSF:PIRSF000124PIRSF:PIRSF500133PANTHER:PTHR11374PANTHER:PTHR11374:SF30MetaCyc:PWY-7346
MetaCyc:PWY-7820SMART:SM00984SUPFAM:SSF48179SUPFAM:SSF51735SUPFAM:SSF52413TIGRFAMs:TIGR03026
InterPro:UDP-Glc/GDP-ManInterPro:UDP-Glc/GDP-Man_DH_CInterPro:UDP-Glc/GDP-Man_DH_C_sfInterPro:UDP-Glc/GDP-Man_DH_NInterPro:UDP-Glc/GDP-Man_DH_dimerInterPro:UDPglc_DH_euk
UniParc:UPI0002336B69:::::
Description
hypothetical protein
Coordinates
chr1:-:7507611..7510385
Molecular Weight (calculated)
52931.8 Da
IEP (calculated)
6.773
GRAVY (calculated)
-0.061
Length
480 amino acids
Sequence
(BLAST)
001: MVKICCIGAG YVGGPTMAVI ALKCPEIEVV VVDIAAPRIN AWNSDHLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVAEAD IVFVSVNTPT KTQGLGAGKA
101: ADLTYWESAA RMIADVSKSD KIVVEKSTVP VKTAEAIERI LTHNRKGINF TILSNPEFLA EGTAIADLFK PDRVLIGGRE TPEGQKAIHS LKNVYAHWVP
201: EDRILCTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVSQVSHS IGTDSRIGPK FLNASVGFGG SCFQKDILNL VYICECNGLP EVANYWKQVI
301: KVNDYQKMRF VNRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC KGLLGDKAKL SIYDPQVTED QIMRDLAMKK FDWDHPAHLQ PLSPTSNKQV
401: SVVWDAYEAI KDAHGICIMT EWDEFKNLDY QKVYDSMQKP AFIFDGRNVV NVNKLREIGF IVYSIGKPLD SWLKDMPAVA
Best Arabidopsis Sequence Match ( AT3G29360.2 )
(BLAST)
001: MVKICCIGAG YVGGPTMAVI ALKCPDVEVA VVDISVPRIN AWNSDTLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIKDLFN PDRVLIGGRE TPEGFKAVQT LKNVYAHWVP
201: EGQIITTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVSYA VGTDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKSRF VNRVVSSMFN SVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLEDKARL SIYDPQVTED QIQRDLSMNK FDWDHPLHLQ PMSPTTVKQV
401: TVTWDAYEAT KDAHGICIMT EWDEFKNLDF QKIFDNMQKP AFVFDGRNIM NLQKLREIGF IVYSIGKPLD DWLKDMPAVA
Arabidopsis Description
UGD2UDP-glucose 6-dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIA8]
SUBAcon: [vacuole,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.