Factsheet for Bra024708.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
golgi 4
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16166	Canola	cytosol	99.58	99.58
AT1G26570.1	Thale cress	cytosol, extracellular	93.97	93.97
VIT_01s0011g00690.t01	Wine grape	cytosol, extracellular	85.86	86.04
Bra026264.1-P	Field mustard	extracellular, vacuole	43.45	84.62
KRH70872	Soybean	endoplasmic reticulum	83.16	83.33
KRH75016	Soybean	endoplasmic reticulum	82.95	83.12
GSMUA_Achr4P03270_001	Banana	cytosol	65.07	83.02
GSMUA_Achr3P30310_001	Banana	cytosol	65.28	82.85
GSMUA_Achr4P14320_001	Banana	cytosol	70.48	82.68
Zm00001d034072_P001	Maize	extracellular	82.33	82.5
Os12t0443600-01	Rice	extracellular	82.12	82.29
TraesCS5D01G404300.1	Wheat	golgi	82.12	82.29
TraesCS5B01G399800.1	Wheat	unclear	81.91	82.08
Os03t0757900-01	Rice	plasma membrane	81.91	82.08
GSMUA_Achr4P07270_001	Banana	extracellular, golgi	64.03	81.91
Bra028430.1-P	Field mustard	cytosol, vacuole	81.7	81.88
Bra006303.1-P	Field mustard	extracellular, vacuole	81.7	81.88
KXG37519	Sorghum	cytosol, extracellular	81.7	81.88
TraesCS5A01G394900.1	Wheat	extracellular, golgi	81.7	81.88
TraesCS4D01G050600.2	Wheat	extracellular	81.5	81.67
HORVU5Hr1G096370.1	Barley	extracellular, golgi	81.5	81.67
TraesCS4A01G264600.1	Wheat	extracellular	81.5	81.67
Zm00001d013245_P001	Maize	plasma membrane	81.5	81.67
Os12t0443500-01	Rice	plasma membrane	81.5	81.67
Bra008695.1-P	Field mustard	extracellular, golgi	81.5	81.67
Bra028234.1-P	Field mustard	extracellular, vacuole	81.29	81.46
GSMUA_Achr3P18750_001	Banana	extracellular, golgi	60.91	81.39
GSMUA_Achr6P11090_001	Banana	cytosol	62.37	81.3
HORVU4Hr1G008270.1	Barley	extracellular, golgi	80.87	81.04
TraesCS4B01G050400.1	Wheat	extracellular	80.87	81.04
GSMUA_Achr10P...	Banana	cytosol	63.2	80.85
EER95293	Sorghum	extracellular, vacuole	80.67	80.83
TraesCS4B01G116200.1	Wheat	extracellular, golgi	80.25	80.42
HORVU4Hr1G021270.1	Barley	extracellular, golgi	80.25	80.42
TraesCS4A01G199200.1	Wheat	extracellular, golgi	80.25	80.42
TraesCS4D01G113800.1	Wheat	extracellular, golgi	80.04	80.21
Os03t0425600-00	Rice	plasma membrane	79.83	79.83
GSMUA_Achr11P...	Banana	cytosol	63.2	78.96
GSMUA_Achr6P23920_001	Banana	cytosol	53.43	78.59
Zm00001d033188_P001	Maize	extracellular	78.17	78.17
TraesCS4B01G077100.1	Wheat	cytosol, vacuole	77.34	77.5
TraesCS4D01G075600.1	Wheat	cytosol, vacuole	77.34	77.34
GSMUA_Achr7P26580_001	Banana	cytosol	20.79	76.92
Bra025395.1-P	Field mustard	cytosol	15.18	76.84
TraesCS4A01G237900.1	Wheat	cytosol, vacuole	76.72	76.72
Os03t0604200-01	Rice	plasma membrane	76.72	76.56
KXG38049	Sorghum	endoplasmic reticulum, extracellular	77.75	74.95
KRG89491	Soybean	cytosol	43.87	71.53
Bra023520.1-P	Field mustard	golgi	79.63	61.67
Bra030352.1-P	Field mustard	extracellular	7.28	48.61
Os04t0581600-01	Rice	cytosol, mitochondrion, peroxisome	20.79	45.66
GSMUA_Achr4P10820_001	Banana	plasma membrane	60.91	39.43
Os03t0147150-00	Rice	plasma membrane	18.3	36.07

Protein Annotations

KEGG:00040+1.1.1.22	KEGG:00053+1.1.1.22	KEGG:00520+1.1.1.22	Gene3D:1.20.5.100	MapMan:3.13.3.1	Gene3D:3.40.50.720
InterPro:6-PGluconate_DH-like_C_sf	EnsemblPlantsGene:Bra024708	EnsemblPlants:Bra024708.1	EnsemblPlants:Bra024708.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003979	GO:GO:0005488	GO:GO:0006065	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	UniProt:M4E7F3	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00984	PFAM:PF03720	PFAM:PF03721
PIRSF:PIRSF000124	PIRSF:PIRSF500133	PANTHER:PTHR11374	PANTHER:PTHR11374:SF30	SMART:SM00984	SUPFAM:SSF48179
SUPFAM:SSF51735	SUPFAM:SSF52413	TIGRFAMs:TIGR03026	InterPro:UDP-Glc/GDP-Man	InterPro:UDP-Glc/GDP-Man_DH_C	InterPro:UDP-Glc/GDP-Man_DH_C_sf
InterPro:UDP-Glc/GDP-Man_DH_N	InterPro:UDP-Glc/GDP-Man_DH_dimer	InterPro:UDPglc_DH_euk	UniParc:UPI00025427AE	SEG:seg	:

Description

AT1G26570 (E=1e-259) UGD1, ATUGD1 | UGD1 (UDP-GLUCOSE DEHYDROGENASE 1); NAD or NADH binding / UDP-glucose 6-dehydrogenase/ binding / catalytic/ coenzyme binding / oxidoreductase/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor

Coordinates

chrA09:+:23397834..23399279

Molecular Weight (calculated)

53018.7 Da

IEP (calculated)

6.033

GRAVY (calculated)

-0.031

Length

481 amino acids

Sequence
(BLAST)

001: MVKICCIGAG YVGGPTMAVM ALKCPEIEVS VVDISEPRIN AWNSDKLPIY EPGLDDVVKQ CRGRNLFFST DVERHVFESD IVFVSVNTPT KTQGLGAGKA
101: ADLTYWESAA RMIADVSKSS KIVVEKSTVP VRTAEAIEKI LTHNSKGIEF QILSNPEFLA EGTAVKDLYN PDRVLIGGRG NAAGEKAVQA LRDVYAHWVP
201: VERIICTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVAHA VGTDTRIGPK FLNASVGFGG SCFQKDILNL IYICECNGLP EAANYWKQVI
301: KVNDYQKTRF ANRVVSSMFN TVSGKKVAIL GFAFKKDTGD TRETPAIDVC NRLVADKAKL SIYDPQVLEE QIRKDLFMAR FDWDHPVSLQ QIKAEGMLEQ
401: VSVVSDAYEA TKDAHGICVL TEWDEFKSLD FERIFESMRK PAFVFDGRNV VDAVKLREIG FIVYSIGKPL DSWLKNMPSV A

Best Arabidopsis Sequence Match ( AT1G26570.1 )
(BLAST)

001: MVKICCIGAG YVGGPTMAVM ALKCPEIEVV VVDISEPRIN AWNSDRLPIY EPGLEDVVKQ CRGKNLFFST DVEKHVFESD IVFVSVNTPT KTQGLGAGKA
101: ADLTYWESAA RMIADVSKSS KIVVEKSTVP VRTAEAIEKI LTHNSKGIEF QILSNPEFLA EGTAIKDLYN PDRVLIGGRD TAAGQKAIKA LRDVYAHWVP
201: VEQIICTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVAHA VGTDTRIGPK FLNASVGFGG SCFQKDILNL IYICECNGLP EAANYWKQVV
301: KVNDYQKIRF ANRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC NRLVADKAKL SIYDPQVLEE QIRRDLSMAR FDWDHPVPLQ QIKAEGISEQ
401: VNVVSDAYEA TKDAHGLCVL TEWDEFKSLD FKKIFDNMQK PAFVFDGRNV VDAVKLREIG FIVYSIGKPL DSWLKDMPAV A

Arabidopsis Description

UGD1UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178WCI2]
SUBAcon: [extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.