Factsheet for VIT_01s0011g00690.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
golgi 4
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0108g01590.t01	Wine grape	cytosol	15.0	91.14
KRH75016	Soybean	endoplasmic reticulum	90.42	90.42
KRH70872	Soybean	endoplasmic reticulum	90.21	90.21
AT1G26570.1	Thale cress	cytosol, extracellular	88.12	87.94
Bra024708.1-P	Field mustard	cytosol, extracellular	86.04	85.86
CDY16166	Canola	cytosol	85.62	85.45
VIT_17s0000g06960.t01	Wine grape	endoplasmic reticulum, golgi	89.38	81.4
KRG89491	Soybean	cytosol	48.75	79.32

Protein Annotations

KEGG:00040+1.1.1.22	KEGG:00053+1.1.1.22	KEGG:00520+1.1.1.22	Gene3D:1.20.5.100	EntrezGene:100261061	wikigene:100261061
EntrezGene:100264653	wikigene:100264653	MapMan:3.13.3.1	Gene3D:3.40.50.720	InterPro:6-PGluconate_DH-like_C_sf	EMBL:AM437570
ProteinID:CAN62897	ProteinID:CAN62897.1	ProteinID:CCB51069	ProteinID:CCB51069.1	UniProt:F6HF82	EMBL:FN595752
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003979	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006024
GO:GO:0006065	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	EntrezGene:LOC100261061	wikigene:LOC100261061
EntrezGene:LOC100264653	wikigene:LOC100264653	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00984	PFAM:PF03720	PFAM:PF03721
PIRSF:PIRSF000124	PIRSF:PIRSF500133	PANTHER:PTHR11374	PANTHER:PTHR11374:SF30	SMART:SM00984	SUPFAM:SSF48179
SUPFAM:SSF51735	SUPFAM:SSF52413	TIGR:TC68052	TIGRFAMs:TIGR03026	InterPro:UDP-Glc/GDP-Man	InterPro:UDP-Glc/GDP-Man_DH_C
InterPro:UDP-Glc/GDP-Man_DH_C_sf	InterPro:UDP-Glc/GDP-Man_DH_N	InterPro:UDP-Glc/GDP-Man_DH_dimer	InterPro:UDPglc_DH_euk	UniParc:UPI0001982894	ArrayExpress:VIT_01s0011g00690
EnsemblPlantsGene:VIT_01s0011g00690	EnsemblPlants:VIT_01s0011g00690.t01	unigene:Vvi.8252	RefSeq:XP_002269692	RefSeq:XP_002269692.1	RefSeq:XP_002284346
RefSeq:XP_002284346.1	:	:	:	:	:

Description

UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F6HF82]

Coordinates

chr1:+:606058..607829

Molecular Weight (calculated)

52746.4 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.048

Length

480 amino acids

Sequence
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPDIEVA VVDISVGRIN AWNSDQLPIY EPGLDEVVKQ CRGKNLFFST DVEKHVSEAD IVFVSVNTPT KTQGLGAGKA
101: ADLTYWESAA RMIADVSKSD KIVVEKSTVP VKTAEAIEKI LTHNSKGINF QILSNPEFLA EGTAIQDLFN PDRVLIGGRE TPEGQKAIKA LRDVYAHWVP
201: VERIICTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTEVSHA VGKDTRIGPK FLNASVGFGG SCFQKDILNL VYICECNGLP EVANYWKQVI
301: KVNDYQKTRF VNRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC KGLLGDKAHL SIYDPQVSGE QIQRDLAMKK FDWDHPIHLQ PLSPTSVKQV
401: SVVWDAYTAT KDAHGICILT EWDEFKSLDY KKIYDNMQKP AFVFDGRNVV DAEKLREIGF IVYSIGKPLD AWLKDMPAVA

Best Arabidopsis Sequence Match ( AT5G15490.1 )
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPSVEVA VVDISVPRIN AWNSDQLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFM PDRVLIGGRE TTEGFAAVKA LKDIYAQWVP
201: EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVSEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKARL SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV
401: SVAWDAYTAT KDAHGICILT EWDEFKKLDF QRIFENMQKP AFVFDGRNVV DADKLREIGF IVYSIGKPLD QWLKDMPALA

Arabidopsis Description

UGD3UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UJW9]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.