Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- golgi 4
- extracellular 5
- vacuole 3
- plasma membrane 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024708.1-P | Field mustard | cytosol, extracellular | 93.97 | 93.97 |
| CDY16166 | Canola | cytosol | 93.56 | 93.56 |
| VIT_01s0011g00690.t01 | Wine grape | cytosol, extracellular | 87.94 | 88.12 |
| KRH70872 | Soybean | endoplasmic reticulum | 84.82 | 85.0 |
| KRH75016 | Soybean | endoplasmic reticulum | 84.62 | 84.79 |
| AT3G29360.1 | Thale cress | cytosol, vacuole | 83.99 | 84.17 |
| TraesCS5D01G404300.1 | Wheat | golgi | 83.99 | 84.17 |
| GSMUA_Achr4P03270_001 | Banana | cytosol | 65.9 | 84.08 |
| TraesCS5B01G399800.1 | Wheat | unclear | 83.78 | 83.96 |
| Zm00001d034072_P001 | Maize | extracellular | 83.58 | 83.75 |
| TraesCS5A01G394900.1 | Wheat | extracellular, golgi | 83.58 | 83.75 |
| HORVU5Hr1G096370.1 | Barley | extracellular, golgi | 83.58 | 83.75 |
| GSMUA_Achr3P30310_001 | Banana | cytosol | 65.9 | 83.64 |
| KXG37519 | Sorghum | cytosol, extracellular | 83.37 | 83.54 |
| Os12t0443600-01 | Rice | extracellular | 83.16 | 83.33 |
| Os03t0757900-01 | Rice | plasma membrane | 83.16 | 83.33 |
| GSMUA_Achr4P14320_001 | Banana | cytosol | 70.89 | 83.17 |
| GSMUA_Achr4P07270_001 | Banana | extracellular, golgi | 64.86 | 82.98 |
| Zm00001d013245_P001 | Maize | plasma membrane | 82.74 | 82.92 |
| AT5G15490.1 | Thale cress | extracellular, vacuole | 82.74 | 82.92 |
| AT5G39320.1 | Thale cress | extracellular | 82.74 | 82.92 |
| Os12t0443500-01 | Rice | plasma membrane | 82.54 | 82.71 |
| TraesCS4D01G050600.2 | Wheat | extracellular | 82.33 | 82.5 |
| TraesCS4A01G264600.1 | Wheat | extracellular | 82.33 | 82.5 |
| TraesCS4B01G050400.1 | Wheat | extracellular | 82.12 | 82.29 |
| HORVU4Hr1G021270.1 | Barley | extracellular, golgi | 81.91 | 82.08 |
| TraesCS4A01G199200.1 | Wheat | extracellular, golgi | 81.91 | 82.08 |
| HORVU4Hr1G008270.1 | Barley | extracellular, golgi | 81.91 | 82.08 |
| TraesCS4D01G113800.1 | Wheat | extracellular, golgi | 81.7 | 81.88 |
| TraesCS4B01G116200.1 | Wheat | extracellular, golgi | 81.7 | 81.88 |
| EER95293 | Sorghum | extracellular, vacuole | 81.7 | 81.88 |
| GSMUA_Achr3P18750_001 | Banana | extracellular, golgi | 61.12 | 81.67 |
| GSMUA_Achr6P11090_001 | Banana | cytosol | 62.58 | 81.57 |
| GSMUA_Achr7P26580_001 | Banana | cytosol | 22.04 | 81.54 |
| GSMUA_Achr10P... | Banana | cytosol | 63.41 | 81.12 |
| GSMUA_Achr6P23920_001 | Banana | cytosol | 54.47 | 80.12 |
| Os03t0425600-00 | Rice | plasma membrane | 79.83 | 79.83 |
| GSMUA_Achr11P... | Banana | cytosol | 63.83 | 79.74 |
| Zm00001d033188_P001 | Maize | extracellular | 78.38 | 78.38 |
| TraesCS4B01G077100.1 | Wheat | cytosol, vacuole | 77.55 | 77.71 |
| TraesCS4D01G075600.1 | Wheat | cytosol, vacuole | 77.55 | 77.55 |
| TraesCS4A01G237900.1 | Wheat | cytosol, vacuole | 76.92 | 76.92 |
| Os03t0604200-01 | Rice | plasma membrane | 76.72 | 76.56 |
| KXG38049 | Sorghum | endoplasmic reticulum, extracellular | 77.96 | 75.15 |
| KRG89491 | Soybean | cytosol | 44.91 | 73.22 |
| AT3G01010.1 | Thale cress | cytosol | 23.91 | 72.78 |
| Os04t0581600-01 | Rice | cytosol, mitochondrion, peroxisome | 20.17 | 44.29 |
| GSMUA_Achr4P10820_001 | Banana | plasma membrane | 61.95 | 40.11 |
| Os03t0147150-00 | Rice | plasma membrane | 18.09 | 35.66 |
Protein Annotations
| KEGG:00040+1.1.1.22 | KEGG:00053+1.1.1.22 | KEGG:00520+1.1.1.22 | Gene3D:1.20.5.100 | MapMan:3.13.3.1 | Gene3D:3.40.50.720 |
| InterPro:6-PGluconate_DH-like_C_sf | EntrezGene:839197 | UniProt:A0A178WCI2 | ProteinID:AAF98561.1 | ProteinID:AEE30705.1 | ArrayExpress:AT1G26570 |
| EnsemblPlantsGene:AT1G26570 | RefSeq:AT1G26570 | TAIR:AT1G26570 | RefSeq:AT1G26570-TAIR-G | EnsemblPlants:AT1G26570.1 | TAIR:AT1G26570.1 |
| EMBL:AY070758 | EMBL:AY084436 | EMBL:AY143922 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003979 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006024 | GO:GO:0006065 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016616 | GO:GO:0051287 |
| GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_173979.1 | ProteinID:OAP14742.1 | PFAM:PF00984 | PFAM:PF03720 |
| PFAM:PF03721 | PIRSF:PIRSF000124 | PIRSF:PIRSF500133 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11374 | PANTHER:PTHR11374:SF30 |
| UniProt:Q9FZE1 | SMART:SM00984 | SUPFAM:SSF48179 | SUPFAM:SSF51735 | SUPFAM:SSF52413 | TIGRFAMs:TIGR03026 |
| InterPro:UDP-Glc/GDP-Man | InterPro:UDP-Glc/GDP-Man_DH_C | InterPro:UDP-Glc/GDP-Man_DH_C_sf | InterPro:UDP-Glc/GDP-Man_DH_N | InterPro:UDP-Glc/GDP-Man_DH_dimer | InterPro:UDPglc_DH_euk |
| Symbol:UGD1 | UniParc:UPI00000AC4B6 | SEG:seg | : | : | : |
Description
UGD1UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178WCI2]
Coordinates
chr1:+:9182008..9184393
Molecular Weight (calculated)
52974.7 Da
IEP (calculated)
6.031
GRAVY (calculated)
-0.026
Length
481 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKICCIGAG YVGGPTMAVM ALKCPEIEVV VVDISEPRIN AWNSDRLPIY EPGLEDVVKQ CRGKNLFFST DVEKHVFESD IVFVSVNTPT KTQGLGAGKA
101: ADLTYWESAA RMIADVSKSS KIVVEKSTVP VRTAEAIEKI LTHNSKGIEF QILSNPEFLA EGTAIKDLYN PDRVLIGGRD TAAGQKAIKA LRDVYAHWVP
201: VEQIICTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVAHA VGTDTRIGPK FLNASVGFGG SCFQKDILNL IYICECNGLP EAANYWKQVV
301: KVNDYQKIRF ANRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC NRLVADKAKL SIYDPQVLEE QIRRDLSMAR FDWDHPVPLQ QIKAEGISEQ
401: VNVVSDAYEA TKDAHGLCVL TEWDEFKSLD FKKIFDNMQK PAFVFDGRNV VDAVKLREIG FIVYSIGKPL DSWLKDMPAV A
101: ADLTYWESAA RMIADVSKSS KIVVEKSTVP VRTAEAIEKI LTHNSKGIEF QILSNPEFLA EGTAIKDLYN PDRVLIGGRD TAAGQKAIKA LRDVYAHWVP
201: VEQIICTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVAHA VGTDTRIGPK FLNASVGFGG SCFQKDILNL IYICECNGLP EAANYWKQVV
301: KVNDYQKIRF ANRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC NRLVADKAKL SIYDPQVLEE QIRRDLSMAR FDWDHPVPLQ QIKAEGISEQ
401: VNVVSDAYEA TKDAHGLCVL TEWDEFKSLD FKKIFDNMQK PAFVFDGRNV VDAVKLREIG FIVYSIGKPL DSWLKDMPAV A
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.