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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • golgi 1
  • cytosol 3
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, golgi, mitochondrion, plastid
BaCelLo:plastid
EpiLoc:golgi
MultiLoc:cytosol
Plant-mPloc:mitochondrion, plastid
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr3P18750_001
GSMUA_Achr3P30310_001
GSMUA_Achr4P03270_001
GSMUA_Achr4P07270_001
GSMUA_Achr4P10820_001
GSMUA_Achr4P14320_001
GSMUA_Achr6P11090_001
GSMUA_Achr6P23920_001
GSMUA_Achr7P26580_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G39320.1 GSMUA_Achr10P... AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr11P... AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr3P18750_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr3P30310_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr4P03270_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr4P07270_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr4P10820_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr4P14320_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr6P11090_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr6P23920_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr7P26580_001 AT1G26570.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P11090_001 Banana cytosol 91.76 93.5
GSMUA_Achr4P03270_001 Banana cytosol 89.36 89.12
GSMUA_Achr3P30310_001 Banana cytosol 87.5 86.81
GSMUA_Achr7P26580_001 Banana cytosol 29.52 85.38
GSMUA_Achr6P23920_001 Banana cytosol 69.41 79.82
GSMUA_Achr4P14320_001 Banana cytosol 86.17 79.02
GSMUA_Achr11P... Banana cytosol 80.05 78.18
CDX69521 Canola cytosol 73.14 74.53
GSMUA_Achr4P07270_001 Banana extracellular, golgi 73.14 73.14
PGSC0003DMT400069038 Potato cytosol 34.57 71.43
EER95293 Sorghum extracellular, vacuole 89.63 70.21
TraesCS4A01G199200.1 Wheat extracellular, golgi 89.1 69.79
HORVU4Hr1G021270.1 Barley extracellular, golgi 89.1 69.79
AT3G01010.1 Thale cress cytosol 29.26 69.62
TraesCS4D01G113800.1 Wheat extracellular, golgi 88.83 69.58
TraesCS4B01G116200.1 Wheat extracellular, golgi 88.83 69.58
Bra006303.1-P Field mustard extracellular, vacuole 88.83 69.58
Bra008695.1-P Field mustard extracellular, golgi 88.83 69.58
CDY26425 Canola extracellular, golgi 88.83 69.58
AT5G15490.1 Thale cress extracellular, vacuole 88.3 69.17
GSMUA_Achr3P18750_001 Banana extracellular, golgi 65.96 68.89
PGSC0003DMT400003666 Potato extracellular, vacuole 87.5 68.4
PGSC0003DMT400064713 Potato cytosol 84.31 68.32
PGSC0003DMT400087395 Potato cytosol, golgi 86.97 68.12
Solyc02g088690.2.1 Tomato nucleus 57.18 68.04
Os03t0425600-00 Rice plasma membrane 86.97 67.98
KRH18404 Soybean endoplasmic reticulum 86.7 67.92
KRH44990 Soybean nucleus 86.7 67.92
KRH01262 Soybean nucleus 86.7 67.92
KRG93627 Soybean endoplasmic reticulum 85.9 67.29
Solyc03g115380.1.1 Tomato nucleus, unclear 85.9 67.29
KRH70872 Soybean endoplasmic reticulum 85.9 67.29
KRH75016 Soybean endoplasmic reticulum 85.64 67.08
AT3G29360.1 Thale cress cytosol, vacuole 85.37 66.88
CDY37001 Canola cytosol, vacuole 84.84 66.46
CDX67427 Canola cytosol, vacuole 84.57 66.25
Solyc06g069550.1.1 Tomato extracellular 84.57 66.25
Bra028430.1-P Field mustard cytosol, vacuole 84.57 66.25
PGSC0003DMT400083187 Potato extracellular 84.31 66.04
Bra028234.1-P Field mustard extracellular, vacuole 84.31 66.04
AT5G39320.1 Thale cress extracellular 84.04 65.83
KRH15845 Soybean cytosol 57.45 65.26
Solyc02g067080.2.1 Tomato extracellular 86.97 64.24
AT1G26570.1 Thale cress cytosol, extracellular 81.12 63.41
Bra024708.1-P Field mustard cytosol, extracellular 80.85 63.2
CDY16166 Canola cytosol 80.59 62.99
KRH56847 Soybean cytosol 79.79 62.76
KRH03109 Soybean cytosol 78.72 61.8
KRG89491 Soybean cytosol 47.07 60.0
CDX70614 Canola cytosol, mitochondrion, peroxisome, plastid 88.83 59.75
CDX78633 Canola cytosol 89.1 59.19
CDX74475 Canola extracellular 40.43 58.91
CDX90989 Canola cytosol, golgi 85.64 58.76
Bra026264.1-P Field mustard extracellular, vacuole 38.03 57.89
Solyc03g065350.1.1 Tomato cytosol, extracellular, peroxisome 42.02 56.23
Bra023520.1-P Field mustard golgi 85.64 51.85
CDX85549 Canola cytosol 85.9 48.14
CDX85269 Canola cytosol 21.81 37.27
GSMUA_Achr4P10820_001 Banana plasma membrane 72.34 36.61
Bra025395.1-P Field mustard cytosol 8.51 33.68
CDX86369 Canola cytosol 7.98 32.61
CDY15951 Canola extracellular 2.93 15.28
Bra030352.1-P Field mustard extracellular 2.93 15.28
Protein Annotations
KEGG:00040+1.1.1.22KEGG:00053+1.1.1.22KEGG:00520+1.1.1.22Gene3D:1.20.5.100MapMan:3.13.3.1Gene3D:3.40.50.720
InterPro:6-PGluconate_DH-like_C_sfGO:GO:0000166GO:GO:0000271GO:GO:0003674GO:GO:0003824GO:GO:0003979
GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0016491
GO:GO:0016616GO:GO:0051287GO:GO:0055114EnsemblPlantsGene:GSMUA_Achr10G18280_001EnsemblPlants:GSMUA_Achr10P18280_001EnsemblPlants:GSMUA_Achr10T18280_001
UniProt:M0RJA3InterPro:NAD(P)-bd_dom_sfPFAM:PF00984PFAM:PF03720PFAM:PF03721PIRSF:PIRSF000124
PIRSF:PIRSF500134PANTHER:PTHR11374PANTHER:PTHR11374:SF30SMART:SM00984SUPFAM:SSF48179SUPFAM:SSF51735
SUPFAM:SSF52413TIGRFAMs:TIGR03026InterPro:UDP-Glc/GDP-ManInterPro:UDP-Glc/GDP-Man_DH_CInterPro:UDP-Glc/GDP-Man_DH_C_sfInterPro:UDP-Glc/GDP-Man_DH_N
InterPro:UDP-Glc/GDP-Man_DH_dimerInterPro:UDPglc_DH_bacUniParc:UPI000294FB41:::
Description
UDP-glucose 6-dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr10G18280_001]
Coordinates
chr10:-:25075828..25077494
Molecular Weight (calculated)
41191.5 Da
IEP (calculated)
8.450
GRAVY (calculated)
0.010
Length
376 amino acids
Sequence
(BLAST)
001: MVKICCIGAG YQCRGKNLFF STNVEVHVAE ADIIFVSVNT PTKTRGLGAG KAADLTYWES AARMIADVSR SDKIVVEKST VPVKTAEAIE KILTHNSKGV
101: NYQILRAVQT LKDVYAHWVP EDRILTTNLW SAELSKLAAN AFLAQRISSV NAISALCEAT GANVSEVAFA VGKDSRIGPK FLNASVGFGG SCFQKDILNL
201: VYICECNGLP EVANYWRQVI KINDYQKSRF VNRVVSSMFN TVSGKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKASI SIYDPQPTSP AAVKQVSVTW
301: DAYAAAKGAH GVCILTEWDE FRELDYQRIY DNMQKPAFVF DGRNVVDAEK LRAIGFIVYS IGKPLDSWLK DMPAIA
Best Arabidopsis Sequence Match ( AT1G26570.1 )
(BLAST)
001: MVKICCIGAG YVGGPTMAVM ALKCPEIEVV VVDISEPRIN AWNSDRLPIY EPGLEDVVKQ CRGKNLFFST DVEKHVFESD IVFVSVNTPT KTQGLGAGKA
101: ADLTYWESAA RMIADVSKSS KIVVEKSTVP VRTAEAIEKI LTHNSKGIEF QILSNPEFLA EGTAIKDLYN PDRVLIGGRD TAAGQKAIKA LRDVYAHWVP
201: VEQIICTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVAHA VGTDTRIGPK FLNASVGFGG SCFQKDILNL IYICECNGLP EAANYWKQVV
301: KVNDYQKIRF ANRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC NRLVADKAKL SIYDPQVLEE QIRRDLSMAR FDWDHPVPLQ QIKAEGISEQ
401: VNVVSDAYEA TKDAHGLCVL TEWDEFKSLD FKKIFDNMQK PAFVFDGRNV VDAVKLREIG FIVYSIGKPL DSWLKDMPAV A
Arabidopsis Description
UGD1UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178WCI2]
SUBAcon: [extracellular,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.