Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025395.1-P Field mustard cytosol 97.83 94.74
CDY15951 Canola extracellular 31.52 40.28
CDX85269 Canola cytosol 89.13 37.27
CDX74475 Canola extracellular 68.48 24.42
Solyc02g088690.2.1 Tomato nucleus 68.48 19.94
GSMUA_Achr4P07270_001 Banana extracellular, golgi 78.26 19.15
GSMUA_Achr3P18750_001 Banana extracellular, golgi 73.91 18.89
AT3G29360.1 Thale cress cytosol, vacuole 82.61 15.83
KXG37519 Sorghum cytosol, extracellular 81.52 15.62
CDY37001 Canola cytosol, vacuole 81.52 15.62
CDX67427 Canola cytosol, vacuole 81.52 15.62
PGSC0003DMT400003666 Potato extracellular, vacuole 81.52 15.59
Zm00001d013245_P001 Maize plasma membrane 80.43 15.42
KRH44990 Soybean nucleus 80.43 15.42
KRH18404 Soybean endoplasmic reticulum 80.43 15.42
KRG93627 Soybean endoplasmic reticulum 80.43 15.42
Zm00001d034072_P001 Maize extracellular 80.43 15.42
CDY26425 Canola extracellular, golgi 80.43 15.42
KRH01262 Soybean nucleus 79.35 15.21
HORVU4Hr1G008270.1 Barley extracellular, golgi 78.26 15.0
Os03t0757900-01 Rice plasma membrane 78.26 15.0
Os12t0443500-01 Rice plasma membrane 78.26 15.0
Os12t0443600-01 Rice extracellular 78.26 15.0
TraesCS4B01G050400.1 Wheat extracellular 78.26 15.0
TraesCS5A01G394900.1 Wheat extracellular, golgi 77.17 14.79
TraesCS4D01G050600.2 Wheat extracellular 77.17 14.79
TraesCS5B01G399800.1 Wheat unclear 77.17 14.79
HORVU5Hr1G096370.1 Barley extracellular, golgi 77.17 14.79
EER95293 Sorghum extracellular, vacuole 77.17 14.79
TraesCS5D01G404300.1 Wheat golgi 77.17 14.79
TraesCS4A01G264600.1 Wheat extracellular 76.09 14.58
CDY16166 Canola cytosol 76.09 14.55
TraesCS4A01G199200.1 Wheat extracellular, golgi 75.0 14.38
TraesCS4D01G113800.1 Wheat extracellular, golgi 75.0 14.38
TraesCS4B01G116200.1 Wheat extracellular, golgi 75.0 14.38
HORVU4Hr1G021270.1 Barley extracellular, golgi 75.0 14.38
Os03t0425600-00 Rice plasma membrane 72.83 13.93
Zm00001d033188_P001 Maize extracellular 72.83 13.93
TraesCS4A01G237900.1 Wheat cytosol, vacuole 72.83 13.93
TraesCS4D01G075600.1 Wheat cytosol, vacuole 72.83 13.93
Os03t0604200-01 Rice plasma membrane 72.83 13.9
Solyc03g065350.1.1 Tomato cytosol, extracellular, peroxisome 42.39 13.88
TraesCS4B01G077100.1 Wheat cytosol, vacuole 71.74 13.75
KXG38049 Sorghum endoplasmic reticulum, extracellular 73.91 13.63
Solyc02g067080.2.1 Tomato extracellular 75.0 13.56
CDX70614 Canola cytosol, mitochondrion, peroxisome, plastid 81.52 13.42
CDX78633 Canola cytosol 81.52 13.25
PGSC0003DMT400064713 Potato cytosol 64.13 12.72
CDX90989 Canola cytosol, golgi 72.83 12.23
CDX85549 Canola cytosol 73.91 10.13
GSMUA_Achr4P10820_001 Banana plasma membrane 78.26 9.69
GSMUA_Achr7P26580_001 Banana cytosol 13.04 9.23
GSMUA_Achr6P23920_001 Banana cytosol 31.52 8.87
GSMUA_Achr3P30310_001 Banana cytosol 35.87 8.71
GSMUA_Achr4P03270_001 Banana cytosol 34.78 8.49
GSMUA_Achr11P... Banana cytosol 34.78 8.31
GSMUA_Achr6P11090_001 Banana cytosol 32.61 8.13
GSMUA_Achr10P... Banana cytosol 32.61 7.98
GSMUA_Achr4P14320_001 Banana cytosol 34.78 7.8
CDX69521 Canola cytosol 10.87 2.71
Os03t0147150-00 Rice plasma membrane 4.35 1.64
PGSC0003DMT400069038 Potato cytosol 0.0 0.0
Os04t0581600-01 Rice cytosol, mitochondrion, peroxisome 0.0 0.0
Protein Annotations
EnsemblPlants:CDX86369EnsemblPlantsGene:GSBRNA2T00144495001Gene3D:3.40.50.720GO:A0A078DDF5GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016616GO:GO:0051287
GO:GO:0055114InterPro:NAD(P)-bd_dom_sfInterPro:UDP-Glc/GDP-Man_DH_NPANTHER:PTHR11374PANTHER:PTHR11374:SF30PFAM:PF03721
ProteinID:CDX86369ProteinID:CDX86369.1SUPFAM:SSF51735UniParc:UPI0004EE1C64MapMan:35.1:
Description
BnaA06g30860D
Coordinates
chrLK031845:+:1239161..1240004
Molecular Weight (calculated)
10049.1 Da
IEP (calculated)
4.341
GRAVY (calculated)
0.013
Length
92 amino acids
Sequence
(BLAST)
1: MQKNGEDICC IGAGYISGPT MAVVALKCPD IEVAVVDISV PRINAWNSDQ LPIYEPGLDE VVKQCRGKNL FFSTDVDKHP LDAWLKDMPA VS
Best Arabidopsis Sequence Match ( AT5G39320.1 )
(BLAST)
001: MVKICCIGAG YVGGPTMAVI ALKCPDIEVA VVDISVPRIN AWNSDQLPIY EPGLDDIVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTTGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LMHNSKGIKF QILSNPEFLA EGTAIADLFN PDRVLIGGRE TPEGFKAVQT LKEVYANWVP
201: EGQIITTNLW SAELSKLAAN AFLAQRISSV NAMSALCEST GADVTQVSYA VGTDSRIGSK FLNASVGFGG SCFQKDILNL VYICQCNGLP EVAEYWKQVI
301: KINDYQKNRF VNRIVSSMFN TVSNKKVAIL GFAFKKDTGD TRETPAIDVC KGLLGDKAQI SIYDPQVTEE QIQRDLSMKK FDWDHPLHLQ PMSPTTVKQV
401: SVTWDAYEAT KDAHAVCVLT EWDEFKSLDY QKIFDNMQKP AFIFDGRNIM NVNKLREIGF IVYSIGKPLD PWLKDMPAFV
Arabidopsis Description
UGD4UDP-glucose 6-dehydrogenase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM01]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.