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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY26425 Canola extracellular, golgi 69.45 97.08
CDX69521 Canola cytosol 52.91 96.21
AT5G15490.1 Thale cress extracellular, vacuole 67.96 95.0
CDX90989 Canola cytosol, golgi 75.26 92.15
Solyc02g088690.2.1 Tomato nucleus 43.22 91.77
CDX74475 Canola extracellular 34.72 90.31
AT3G01010.1 Thale cress cytosol 20.86 88.61
Zm00001d034072_P001 Maize extracellular 63.19 88.33
TraesCS5D01G404300.1 Wheat golgi 63.19 88.33
KXG37519 Sorghum cytosol, extracellular 63.19 88.33
PGSC0003DMT400064713 Potato cytosol 60.95 88.15
KRH44990 Soybean nucleus 63.04 88.12
TraesCS5B01G399800.1 Wheat unclear 63.04 88.12
KRH01262 Soybean nucleus 62.89 87.92
TraesCS5A01G394900.1 Wheat extracellular, golgi 62.89 87.92
PGSC0003DMT400003666 Potato extracellular, vacuole 62.89 87.73
HORVU5Hr1G096370.1 Barley extracellular, golgi 62.74 87.71
EER95293 Sorghum extracellular, vacuole 62.74 87.71
CDY37001 Canola cytosol, vacuole 62.59 87.5
CDX67427 Canola cytosol, vacuole 62.59 87.5
KRH18404 Soybean endoplasmic reticulum 62.59 87.5
GSMUA_Achr4P14320_001 Banana cytosol 53.35 87.32
Os12t0443500-01 Rice plasma membrane 62.44 87.29
Zm00001d013245_P001 Maize plasma membrane 62.44 87.29
Os03t0757900-01 Rice plasma membrane 62.3 87.08
TraesCS4D01G050600.2 Wheat extracellular 62.3 87.08
Os12t0443600-01 Rice extracellular 62.15 86.88
HORVU4Hr1G008270.1 Barley extracellular, golgi 62.15 86.88
GSMUA_Achr4P03270_001 Banana cytosol 48.73 86.74
HORVU4Hr1G021270.1 Barley extracellular, golgi 62.0 86.67
KRG93627 Soybean endoplasmic reticulum 62.0 86.67
TraesCS4B01G116200.1 Wheat extracellular, golgi 62.0 86.67
TraesCS4A01G199200.1 Wheat extracellular, golgi 62.0 86.67
TraesCS4D01G113800.1 Wheat extracellular, golgi 61.85 86.46
TraesCS4B01G050400.1 Wheat extracellular 61.85 86.46
TraesCS4A01G264600.1 Wheat extracellular 61.7 86.25
GSMUA_Achr4P07270_001 Banana extracellular, golgi 48.29 86.17
GSMUA_Achr10P... Banana cytosol 48.14 85.9
GSMUA_Achr3P30310_001 Banana cytosol 48.44 85.75
Bra023520.1-P Field mustard golgi 79.28 85.67
GSMUA_Achr6P11090_001 Banana cytosol 47.09 85.64
GSMUA_Achr11P... Banana cytosol 48.88 85.19
PGSC0003DMT400069038 Potato cytosol 22.95 84.62
CDX70614 Canola cytosol, mitochondrion, peroxisome, plastid 70.49 84.62
Os03t0425600-00 Rice plasma membrane 60.36 84.2
CDX78633 Canola cytosol 70.94 84.1
Solyc02g067080.2.1 Tomato extracellular 63.34 83.5
GSMUA_Achr3P18750_001 Banana extracellular, golgi 44.56 83.06
GSMUA_Achr6P23920_001 Banana cytosol 40.24 82.57
Os03t0604200-01 Rice plasma membrane 58.27 81.12
TraesCS4B01G077100.1 Wheat cytosol, vacuole 57.53 80.42
TraesCS4D01G075600.1 Wheat cytosol, vacuole 57.38 80.04
TraesCS4A01G237900.1 Wheat cytosol, vacuole 56.93 79.42
CDY16166 Canola cytosol 56.93 79.42
GSMUA_Achr7P26580_001 Banana cytosol 15.35 79.23
Zm00001d033188_P001 Maize extracellular 56.78 79.21
KXG38049 Sorghum endoplasmic reticulum, extracellular 56.48 75.95
CDX86369 Canola cytosol 10.13 73.91
Solyc03g065350.1.1 Tomato cytosol, extracellular, peroxisome 30.55 72.95
CDX85269 Canola cytosol 22.06 67.27
CDY15951 Canola extracellular 5.51 51.39
Os04t0581600-01 Rice cytosol, mitochondrion, peroxisome 14.75 45.21
GSMUA_Achr4P10820_001 Banana plasma membrane 47.69 43.07
Os03t0147150-00 Rice plasma membrane 12.67 34.84
Protein Annotations
KEGG:00040+1.1.1.22KEGG:00053+1.1.1.22KEGG:00500+1.1.1.22KEGG:00520+1.1.1.22Gene3D:1.20.5.100MapMan:3.13.3.1
Gene3D:3.40.50.720InterPro:6-PGluconate_DH-like_C_sfGO:A0A078DB78EnsemblPlants:CDX85549ProteinID:CDX85549ProteinID:CDX85549.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152
GO:GO:0016616GO:GO:0051287GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00143265001InterPro:NAD(P)-bd_dom_sfPFAM:PF00984
PFAM:PF03720PFAM:PF03721PANTHER:PTHR11374PANTHER:PTHR11374:SF30MetaCyc:PWY-7346SMART:SM00984
SUPFAM:SSF48179SUPFAM:SSF51735SUPFAM:SSF52413TIGRFAMs:TIGR03026InterPro:UDP-Glc/GDP-ManInterPro:UDP-Glc/GDP-Man_DH_C
InterPro:UDP-Glc/GDP-Man_DH_C_sfInterPro:UDP-Glc/GDP-Man_DH_NInterPro:UDP-Glc/GDP-Man_DH_dimerUniPathway:UPA00038UniParc:UPI0004EEC1F1SEG:seg
Description
BnaA02g02640D
Coordinates
chrLK031842:+:596597..600178
Molecular Weight (calculated)
74506.1 Da
IEP (calculated)
5.929
GRAVY (calculated)
-0.206
Length
671 amino acids
Sequence
(BLAST)
001: MYISDFTNIS GRTPEACTKF LLSVENFVHS RSIRVGDPQK IHILQAKKKM VKICCIGAGY VGGPTMAVIA LKCPSVEVAV VDISVPRITA WNSDQLPIYE
101: PGLDDVVKQC RGKNLFFSTD VEKHVREADI VFVSVNTPTK TRGLGAGKAA DLTYWESAAR MIADVSVSDK IVVEKSTVPV KTAEAIEKIL THNSKGIKFQ
201: ILSNPEFLAE GTAIEDLFKP DRVLIGGRET PEGFAAVKAL KDIYSQWVPE ERILTTNLWS AELSKLAANA FLAQRISSVN AMSALCEATG ANVTEVSYAV
301: GKDSRIGPKF LNSSVGFGGS CFQKDILNLV YICECNGLPE VAEYWKQVIK INDYQKTRFV NRIVSSMFNT VSNKKIAVLG FAFKKDTGDT RETPAIDVCK
401: GLIGDKARIS IYDPQVTEEQ IQRDLTMNKF DWDHPLHLQP MSPTTVKQVS VAWDAYAATK DAHGICILTE WDEFKKLDYE KIFENMQKPA FVFDGRNVVD
501: AEKLRKIGFI VYSIVDGVKL AGEAMDAVHE RPSGFLRHKK VSKAAEIECG FVSSDQKLEE EKVSRCETSN EPASFLGDEN KFDQQKRRRA GESESRVLRN
601: EQILVEEDIS SDEESASFLG LKCELESGDT VFVTECDKRN VEHLLITRKQ SNDEGLGLLS AVPFTVGVKF Y
Best Arabidopsis Sequence Match ( AT5G15490.1 )
(BLAST)
001: MVKICCIGAG YVGGPTMAVI ALKCPSVEVA VVDISVPRIN AWNSDQLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFM PDRVLIGGRE TTEGFAAVKA LKDIYAQWVP
201: EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVSEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKARL SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV
401: SVAWDAYTAT KDAHGICILT EWDEFKKLDF QRIFENMQKP AFVFDGRNVV DADKLREIGF IVYSIGKPLD QWLKDMPALA
Arabidopsis Description
UGD3UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UJW9]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.