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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • peroxisome 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, peroxisome, plastid
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006303.1-P Field mustard extracellular, vacuole 85.51 99.58
CDX69521 Canola cytosol 65.47 99.19
CDY26425 Canola extracellular, golgi 84.79 98.75
AT5G15490.1 Thale cress extracellular, vacuole 83.9 97.71
AT3G01010.1 Thale cress cytosol 26.83 94.94
Solyc02g088690.2.1 Tomato nucleus 51.88 91.77
CDX74475 Canola extracellular 41.68 90.31
TraesCS5D01G404300.1 Wheat golgi 77.46 90.21
TraesCS5B01G399800.1 Wheat unclear 77.28 90.0
KXG37519 Sorghum cytosol, extracellular 77.28 90.0
KRH01262 Soybean nucleus 77.28 90.0
TraesCS5A01G394900.1 Wheat extracellular, golgi 77.1 89.79
HORVU5Hr1G096370.1 Barley extracellular, golgi 77.1 89.79
PGSC0003DMT400064713 Potato cytosol 74.42 89.66
Zm00001d034072_P001 Maize extracellular 76.92 89.58
KRH44990 Soybean nucleus 76.92 89.58
GSMUA_Achr4P03270_001 Banana cytosol 60.29 89.39
EER95293 Sorghum extracellular, vacuole 76.74 89.38
CDX78633 Canola cytosol 90.16 89.05
GSMUA_Achr4P14320_001 Banana cytosol 65.3 89.02
Os12t0443600-01 Rice extracellular 76.39 88.96
CDX67427 Canola cytosol, vacuole 76.39 88.96
TraesCS4D01G050600.2 Wheat extracellular 76.39 88.96
CDY37001 Canola cytosol, vacuole 76.39 88.96
Zm00001d013245_P001 Maize plasma membrane 76.39 88.96
GSMUA_Achr6P11090_001 Banana cytosol 58.68 88.89
GSMUA_Achr10P... Banana cytosol 59.75 88.83
PGSC0003DMT400003666 Potato extracellular, vacuole 76.39 88.77
HORVU4Hr1G008270.1 Barley extracellular, golgi 76.21 88.75
KRH18404 Soybean endoplasmic reticulum 76.21 88.75
Os12t0443500-01 Rice plasma membrane 76.21 88.75
HORVU4Hr1G021270.1 Barley extracellular, golgi 76.03 88.54
TraesCS4B01G116200.1 Wheat extracellular, golgi 76.03 88.54
TraesCS4A01G199200.1 Wheat extracellular, golgi 76.03 88.54
Os03t0757900-01 Rice plasma membrane 76.03 88.54
GSMUA_Achr3P30310_001 Banana cytosol 59.93 88.39
TraesCS4D01G113800.1 Wheat extracellular, golgi 75.85 88.33
TraesCS4B01G050400.1 Wheat extracellular 75.85 88.33
TraesCS4A01G264600.1 Wheat extracellular 75.85 88.33
GSMUA_Achr4P07270_001 Banana extracellular, golgi 59.39 88.3
KRG93627 Soybean endoplasmic reticulum 75.49 87.92
GSMUA_Achr11P... Banana cytosol 60.29 87.53
Os03t0425600-00 Rice plasma membrane 73.88 85.86
GSMUA_Achr7P26580_001 Banana cytosol 19.86 85.38
PGSC0003DMT400069038 Potato cytosol 27.73 85.16
GSMUA_Achr6P23920_001 Banana cytosol 49.73 85.02
GSMUA_Achr3P18750_001 Banana extracellular, golgi 54.74 85.0
CDX90989 Canola cytosol, golgi 82.47 84.12
Solyc02g067080.2.1 Tomato extracellular 76.57 84.09
TraesCS4B01G077100.1 Wheat cytosol, vacuole 70.66 82.29
Os03t0604200-01 Rice plasma membrane 70.84 82.16
TraesCS4D01G075600.1 Wheat cytosol, vacuole 70.66 82.12
TraesCS4A01G237900.1 Wheat cytosol, vacuole 70.3 81.7
CDX86369 Canola cytosol 13.42 81.52
CDY16166 Canola cytosol 70.13 81.5
Zm00001d033188_P001 Maize extracellular 69.95 81.29
KXG38049 Sorghum endoplasmic reticulum, extracellular 69.77 78.16
Solyc03g065350.1.1 Tomato cytosol, extracellular, peroxisome 36.85 73.31
CDX85549 Canola cytosol 84.62 70.49
CDX85269 Canola cytosol 27.73 70.45
CDY15951 Canola extracellular 6.8 52.78
Os04t0581600-01 Rice cytosol, mitochondrion, peroxisome 17.71 45.21
GSMUA_Achr4P10820_001 Banana plasma membrane 57.07 42.93
Os03t0147150-00 Rice plasma membrane 15.21 34.84
Protein Annotations
KEGG:00040+1.1.1.22KEGG:00053+1.1.1.22KEGG:00500+1.1.1.22KEGG:00520+1.1.1.22Gene3D:1.20.5.100MapMan:3.13.3.1
Gene3D:3.40.50.720InterPro:6-PGluconate_DH-like_C_sfGO:A0A078C371EnsemblPlants:CDX70614ProteinID:CDX70614ProteinID:CDX70614.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152
GO:GO:0016616GO:GO:0051287GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00140458001InterPro:NAD(P)-bd_dom_sfPFAM:PF00984
PFAM:PF03720PFAM:PF03721PANTHER:PTHR11374PANTHER:PTHR11374:SF30MetaCyc:PWY-7346SMART:SM00984
SUPFAM:SSF48179SUPFAM:SSF51735SUPFAM:SSF52413TIGRFAMs:TIGR03026InterPro:UDP-Glc/GDP-ManInterPro:UDP-Glc/GDP-Man_DH_C
InterPro:UDP-Glc/GDP-Man_DH_C_sfInterPro:UDP-Glc/GDP-Man_DH_NInterPro:UDP-Glc/GDP-Man_DH_dimerUniPathway:UPA00038UniParc:UPI0004EE18EC:
Description
BnaC03g06980D
Coordinates
chrLK031791:-:1236843..1239266
Molecular Weight (calculated)
61996.7 Da
IEP (calculated)
8.051
GRAVY (calculated)
-0.058
Length
559 amino acids
Sequence
(BLAST)
001: MFNVSSRHLP NNVSPIYQGH FRNLIKYINS LLAPLVFNIV RFSAIHLVSP AIFSDSVHQR LHKGSICVGD PRKTHLTSTM VKICCIGAGY VGGPTMAVIA
101: LKCPSVEVAV VDISVPRINA WNSDQLPIYE PGLDDVVKQC RGKNLFFSTD VEKHVREADI VFVSVNTPTK TRGLGAGKAA DLTYWESAAR MIADVSVSDK
201: IVVEKSTVPV KTAEAIEKIL THNSKGIKFQ ILSNPEFLAE GTAIEDLFKP DRVLIGGRET TEGFAAVKAL KDVYSQWVPE ERIVTTNLWS AELSKLAANA
301: FLAQRISSVN AMSALCEATG ANVSEVSYAV GKDSRIGPKF LNSSVGFGGS CFQKDILNLV YICECNGLPE VAEYWKQVIK INDYQKTRFV NRIVSSMFNT
401: VSNKKIAVLG FAFKKDTGDT RETPAIDVCK GLLGDKARIS IYDPQVTEEQ IQRDLTMNKF DWDHPLHLQP MSPTTVKQVS VAWDAYAATK DAHGICILTE
501: WDEFKKLDYE RIFENMQKPA FVFDGRNVVD AEKLRKIGFI VYSIGKPLDQ WLKDMPALA
Best Arabidopsis Sequence Match ( AT5G15490.1 )
(BLAST)
001: MVKICCIGAG YVGGPTMAVI ALKCPSVEVA VVDISVPRIN AWNSDQLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFM PDRVLIGGRE TTEGFAAVKA LKDIYAQWVP
201: EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVSEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKARL SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV
401: SVAWDAYTAT KDAHGICILT EWDEFKKLDF QRIFENMQKP AFVFDGRNVV DADKLREIGF IVYSIGKPLD QWLKDMPALA
Arabidopsis Description
UGD3UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UJW9]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.