Factsheet for HORVU5Hr1G096370.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

cytosol 2
golgi 5
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G008270.1
HORVU4Hr1G021270.1
HORVU5Hr1G096370.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G39320.1	HORVU4Hr1G008270.1	AT1G26570.1	21798944
AT5G39320.1	HORVU4Hr1G021270.1	AT1G26570.1	21798944
AT5G39320.1	HORVU5Hr1G096370.1	AT1G26570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G399800.1	Wheat	unclear	97.71	97.71
TraesCS5D01G404300.1	Wheat	golgi	97.5	97.5
TraesCS5A01G394900.1	Wheat	extracellular, golgi	97.08	97.08
HORVU4Hr1G008270.1	Barley	extracellular, golgi	96.88	96.88
KXG37519	Sorghum	cytosol, extracellular	94.58	94.58
Zm00001d034072_P001	Maize	extracellular	94.38	94.38
Os12t0443500-01	Rice	plasma membrane	94.17	94.17
Zm00001d013245_P001	Maize	plasma membrane	93.96	93.96
Solyc02g088690.2.1	Tomato	nucleus	61.67	93.67
HORVU4Hr1G021270.1	Barley	extracellular, golgi	91.25	91.25
PGSC0003DMT400003666	Potato	extracellular, vacuole	90.42	90.23
CDY26425	Canola	extracellular, golgi	90.21	90.21
Bra008695.1-P	Field mustard	extracellular, golgi	90.21	90.21
CDX69521	Canola	cytosol	69.17	89.97
Bra006303.1-P	Field mustard	extracellular, vacuole	89.58	89.58
PGSC0003DMT400064713	Potato	cytosol	86.46	89.44
KRH44990	Soybean	nucleus	89.38	89.38
AT5G15490.1	Thale cress	extracellular, vacuole	89.38	89.38
KRH01262	Soybean	nucleus	89.17	89.17
KRG93627	Soybean	endoplasmic reticulum	88.96	88.96
KRH70872	Soybean	endoplasmic reticulum	88.75	88.75
AT3G29360.1	Thale cress	cytosol, vacuole	88.54	88.54
KRH18404	Soybean	endoplasmic reticulum	88.54	88.54
KRH75016	Soybean	endoplasmic reticulum	88.33	88.33
PGSC0003DMT400087395	Potato	cytosol, golgi	87.92	87.92
CDX67427	Canola	cytosol, vacuole	87.5	87.5
Bra028430.1-P	Field mustard	cytosol, vacuole	87.5	87.5
Bra026264.1-P	Field mustard	extracellular, vacuole	45.0	87.45
AT5G39320.1	Thale cress	extracellular	87.29	87.29
CDY37001	Canola	cytosol, vacuole	87.29	87.29
Bra028234.1-P	Field mustard	extracellular, vacuole	86.88	86.88
Solyc03g115380.1.1	Tomato	nucleus, unclear	86.88	86.88
CDX74475	Canola	extracellular	46.67	86.82
Solyc06g069550.1.1	Tomato	extracellular	86.25	86.25
PGSC0003DMT400069038	Potato	cytosol	32.5	85.71
PGSC0003DMT400083187	Potato	extracellular	85.62	85.62
Solyc02g067080.2.1	Tomato	extracellular	90.0	84.87
AT1G26570.1	Thale cress	cytosol, extracellular	83.75	83.58
AT3G01010.1	Thale cress	cytosol	27.08	82.28
Bra024708.1-P	Field mustard	cytosol, extracellular	81.67	81.5
CDY16166	Canola	cytosol	81.25	81.08
KRH03109	Soybean	cytosol	78.54	78.71
KRH56847	Soybean	cytosol	78.12	78.45
KRG89491	Soybean	cytosol	47.92	77.97
Bra025395.1-P	Field mustard	cytosol	15.42	77.89
CDX86369	Canola	cytosol	14.79	77.17
CDX70614	Canola	cytosol, mitochondrion, peroxisome, plastid	89.79	77.1
CDX90989	Canola	cytosol, golgi	87.5	76.64
CDX78633	Canola	cytosol	89.79	76.15
KRH15845	Soybean	cytosol	52.08	75.53
Solyc03g065350.1.1	Tomato	cytosol, extracellular, peroxisome	42.71	72.95
Bra023520.1-P	Field mustard	golgi	87.5	67.63
CDX85269	Canola	cytosol	30.21	65.91
CDX85549	Canola	cytosol	87.71	62.74
Bra030352.1-P	Field mustard	extracellular	7.08	47.22
CDY15951	Canola	extracellular	7.08	47.22

Protein Annotations

KEGG:00040+1.1.1.22	KEGG:00053+1.1.1.22	KEGG:00520+1.1.1.22	Gene3D:1.20.5.100	MapMan:3.13.3.1	Gene3D:3.40.50.720
InterPro:6-PGluconate_DH-like_C_sf	EMBL:AK357354	UniProt:F2D0E7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003979	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616
GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:HORVU5Hr1G096370	EnsemblPlants:HORVU5Hr1G096370.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00984
PFAM:PF03720	PFAM:PF03721	PIRSF:PIRSF000124	PIRSF:PIRSF500133	PANTHER:PTHR11374	PANTHER:PTHR11374:SF30
SMART:SM00984	SUPFAM:SSF48179	SUPFAM:SSF51735	SUPFAM:SSF52413	TIGRFAMs:TIGR03026	InterPro:UDP-Glc/GDP-Man
InterPro:UDP-Glc/GDP-Man_DH_C	InterPro:UDP-Glc/GDP-Man_DH_C_sf	InterPro:UDP-Glc/GDP-Man_DH_N	InterPro:UDP-Glc/GDP-Man_DH_dimer	InterPro:UDPglc_DH_euk	UniParc:UPI0002004FDE

Description

UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F2D0E7]

Coordinates

chrchr5H:-:601141344..601143894

Molecular Weight (calculated)

52651.3 Da

IEP (calculated)

6.277

GRAVY (calculated)

-0.056

Length

480 amino acids

Sequence
(BLAST)

001: MVKICCIGAG YVGGPTMAVI AIKCPAIEVV VVDISKPRID AWNSDTLPIY EPGLDDVVKA CRGKNLFFST DVEKHVAEAD IIFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSKSD KIVVEKSTVP VKTAEAIEKI LTHNSKGINY QILSNPEFLA EGTAIDDLFK PDRVLIGGRE TPEGRKAVEA LKSVYAHWVP
201: EENIITTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVSEVSYA IGKDSRIGPK FLNASVGFGG SCFQKDILNL VYICECNGLP EVANYWKQVI
301: KINDYQKSRF VNRVVSSMFN TVSGKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKAQV SIYDPQVTED QIQRDLAMNK FDWDHPMHLQ PTSPTAVKQV
401: SVVWDAYEAT KGAHAVCILT EWNEFKSLDY KKIFDNMQKP AFVFDGRNVV DAEKLREIGF IVYSIGKPLD GWLKDMPAVA

Best Arabidopsis Sequence Match ( AT5G15490.1 )
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPSVEVA VVDISVPRIN AWNSDQLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFM PDRVLIGGRE TTEGFAAVKA LKDIYAQWVP
201: EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVSEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKARL SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV
401: SVAWDAYTAT KDAHGICILT EWDEFKKLDF QRIFENMQKP AFVFDGRNVV DADKLREIGF IVYSIGKPLD QWLKDMPALA

Arabidopsis Description

UGD3UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UJW9]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.