Factsheet for Solyc06g069550.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 2
golgi 4
extracellular 4
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

nucleus: 25464976
extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400083187	Potato	extracellular	98.12	98.12
Solyc03g115380.1.1	Tomato	nucleus, unclear	88.96	88.96
Solyc02g088690.2.1	Tomato	nucleus	58.12	88.29
GSMUA_Achr4P03270_001	Banana	cytosol	69.17	88.06
GSMUA_Achr6P11090_001	Banana	cytosol	66.88	86.99
Zm00001d034072_P001	Maize	extracellular	86.88	86.88
TraesCS5B01G399800.1	Wheat	unclear	86.88	86.88
TraesCS5D01G404300.1	Wheat	golgi	86.67	86.67
KXG37519	Sorghum	cytosol, extracellular	86.67	86.67
GSMUA_Achr4P14320_001	Banana	cytosol	73.96	86.59
TraesCS5A01G394900.1	Wheat	extracellular, golgi	86.46	86.46
Os12t0443600-01	Rice	extracellular	86.46	86.46
HORVU5Hr1G096370.1	Barley	extracellular, golgi	86.25	86.25
Os03t0757900-01	Rice	plasma membrane	86.25	86.25
Zm00001d013245_P001	Maize	plasma membrane	86.04	86.04
GSMUA_Achr3P30310_001	Banana	cytosol	67.92	86.02
GSMUA_Achr4P07270_001	Banana	extracellular, golgi	67.29	85.9
Os12t0443500-01	Rice	plasma membrane	85.83	85.83
HORVU4Hr1G021270.1	Barley	extracellular, golgi	85.62	85.62
TraesCS4A01G199200.1	Wheat	extracellular, golgi	85.62	85.62
TraesCS4D01G113800.1	Wheat	extracellular, golgi	85.42	85.42
TraesCS4B01G116200.1	Wheat	extracellular, golgi	85.42	85.42
TraesCS4A01G264600.1	Wheat	extracellular	85.21	85.21
TraesCS4B01G050400.1	Wheat	extracellular	84.79	84.79
HORVU4Hr1G008270.1	Barley	extracellular, golgi	84.79	84.79
TraesCS4D01G050600.2	Wheat	extracellular	84.58	84.58
EER95293	Sorghum	extracellular, vacuole	84.58	84.58
GSMUA_Achr10P...	Banana	cytosol	66.25	84.57
GSMUA_Achr11P...	Banana	cytosol	67.71	84.42
GSMUA_Achr6P23920_001	Banana	cytosol	57.29	84.1
GSMUA_Achr3P18750_001	Banana	extracellular, golgi	62.71	83.61
GSMUA_Achr7P26580_001	Banana	cytosol	22.08	81.54
Solyc02g067080.2.1	Tomato	extracellular	86.46	81.53
Os03t0425600-00	Rice	plasma membrane	80.42	80.25
VIT_17s0000g06960.t01	Wine grape	endoplasmic reticulum, golgi	87.71	79.89
Os03t0604200-01	Rice	plasma membrane	78.96	78.63
TraesCS4B01G077100.1	Wheat	cytosol, vacuole	78.54	78.54
TraesCS4D01G075600.1	Wheat	cytosol, vacuole	78.54	78.38
Zm00001d033188_P001	Maize	extracellular	78.33	78.17
TraesCS4A01G237900.1	Wheat	cytosol, vacuole	78.12	77.96
KXG38049	Sorghum	endoplasmic reticulum, extracellular	77.92	74.95
Solyc03g065350.1.1	Tomato	cytosol, extracellular, peroxisome	41.04	70.11
Os04t0581600-01	Rice	cytosol, mitochondrion, peroxisome	20.42	44.75
GSMUA_Achr4P10820_001	Banana	plasma membrane	64.17	41.45
Os03t0147150-00	Rice	plasma membrane	17.29	34.02

Protein Annotations

KEGG:00040+1.1.1.22	KEGG:00053+1.1.1.22	KEGG:00520+1.1.1.22	Gene3D:1.20.5.100	MapMan:3.13.3.1	Gene3D:3.40.50.720
InterPro:6-PGluconate_DH-like_C_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003979	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829
GO:GO:0006024	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016491	GO:GO:0016616
GO:GO:0051287	GO:GO:0055114	UniProt:K4C8C8	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00984	PFAM:PF03720
PFAM:PF03721	PIRSF:PIRSF000124	PIRSF:PIRSF500133	PANTHER:PTHR11374	PANTHER:PTHR11374:SF30	SMART:SM00984
SUPFAM:SSF48179	SUPFAM:SSF51735	SUPFAM:SSF52413	EnsemblPlantsGene:Solyc06g069550.1	EnsemblPlants:Solyc06g069550.1.1	TIGRFAMs:TIGR03026
InterPro:UDP-Glc/GDP-Man	InterPro:UDP-Glc/GDP-Man_DH_C	InterPro:UDP-Glc/GDP-Man_DH_C_sf	InterPro:UDP-Glc/GDP-Man_DH_N	InterPro:UDP-Glc/GDP-Man_DH_dimer	InterPro:UDPglc_DH_euk
UniParc:UPI0002766B53	:	:	:	:	:

Description

UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:K4C8C8]

Coordinates

chr6:+:43305375..43306817

Molecular Weight (calculated)

52932.7 Da

IEP (calculated)

6.762

GRAVY (calculated)

-0.071

Length

480 amino acids

Sequence
(BLAST)

001: MVKICCIGAG YVGGPTMAVI AFKCPAIEVA VVDISFARIT AWNSDQLPIY EPGLEDIVKQ CRGKNLFFST EVEKHVSEAD IIFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSKND KIVVEKSTVP VKTAEAIEKI LTHNSNGIKY QILSNPEFLA EGTAIQDLFN PDRILIGGRE TPGGQKAIQA LKEVYAHWVP
201: EDRIICTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVSHA VGKDTRVGSK FLNASVGFGG SCFQKDILSL VYICECNGLK EVANYWKQVI
301: QVNDYQKNRF VNRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC KGLLGDNANL SIYDPQVTED QIRKDLSMKK FDWDNPIHLQ PMSPTVMKQL
401: NVVWDAYAAT KGAHGLCLLT EWDEFKTLDF KKIYDNMQKP AFVFDGRNIV DEQKLREIGF IVYSIGKPLD GWLKDMPAVA

Best Arabidopsis Sequence Match ( AT3G29360.2 )
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPDVEVA VVDISVPRIN AWNSDTLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIKDLFN PDRVLIGGRE TPEGFKAVQT LKNVYAHWVP
201: EGQIITTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVSYA VGTDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKSRF VNRVVSSMFN SVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLEDKARL SIYDPQVTED QIQRDLSMNK FDWDHPLHLQ PMSPTTVKQV
401: TVTWDAYEAT KDAHGICIMT EWDEFKNLDF QKIFDNMQKP AFVFDGRNIM NLQKLREIGF IVYSIGKPLD DWLKDMPAVA

Arabidopsis Description

UGD2UDP-glucose 6-dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIA8]
SUBAcon: [vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.