Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 1
- mitochondrion 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026264.1-P | Field mustard | extracellular, vacuole | 27.05 | 26.72 |
| CDX74475 | Canola | extracellular | 27.87 | 26.36 |
| Solyc02g088690.2.1 | Tomato | nucleus | 29.51 | 22.78 |
| Os04t0581600-01 | Rice | cytosol, mitochondrion, peroxisome | 19.26 | 21.46 |
| CDY16166 | Canola | cytosol | 36.48 | 18.5 |
| PGSC0003DMT400064713 | Potato | cytosol | 34.84 | 18.32 |
| Bra024708.1-P | Field mustard | cytosol, extracellular | 36.07 | 18.3 |
| AT1G26570.1 | Thale cress | cytosol, extracellular | 35.66 | 18.09 |
| KRG93627 | Soybean | endoplasmic reticulum | 35.25 | 17.92 |
| KRH18404 | Soybean | endoplasmic reticulum | 35.25 | 17.92 |
| Os03t0604200-01 | Rice | plasma membrane | 35.25 | 17.84 |
| Bra008695.1-P | Field mustard | extracellular, golgi | 34.84 | 17.71 |
| PGSC0003DMT400087395 | Potato | cytosol, golgi | 34.84 | 17.71 |
| Bra006303.1-P | Field mustard | extracellular, vacuole | 34.84 | 17.71 |
| Solyc03g115380.1.1 | Tomato | nucleus, unclear | 34.84 | 17.71 |
| CDY26425 | Canola | extracellular, golgi | 34.84 | 17.71 |
| AT5G15490.1 | Thale cress | extracellular, vacuole | 34.84 | 17.71 |
| AT3G29360.1 | Thale cress | cytosol, vacuole | 34.84 | 17.71 |
| KRH44990 | Soybean | nucleus | 34.43 | 17.5 |
| KRH01262 | Soybean | nucleus | 34.43 | 17.5 |
| PGSC0003DMT400003666 | Potato | extracellular, vacuole | 34.43 | 17.46 |
| CDX69521 | Canola | cytosol | 26.23 | 17.34 |
| Os12t0443600-01 | Rice | extracellular | 34.02 | 17.29 |
| Os03t0757900-01 | Rice | plasma membrane | 34.02 | 17.29 |
| Os12t0443500-01 | Rice | plasma membrane | 34.02 | 17.29 |
| CDY37001 | Canola | cytosol, vacuole | 34.02 | 17.29 |
| Solyc06g069550.1.1 | Tomato | extracellular | 34.02 | 17.29 |
| Bra028430.1-P | Field mustard | cytosol, vacuole | 34.02 | 17.29 |
| AT5G39320.1 | Thale cress | extracellular | 34.02 | 17.29 |
| CDX67427 | Canola | cytosol, vacuole | 34.02 | 17.29 |
| Os03t0425600-00 | Rice | plasma membrane | 34.02 | 17.26 |
| PGSC0003DMT400083187 | Potato | extracellular | 33.61 | 17.08 |
| Bra028234.1-P | Field mustard | extracellular, vacuole | 33.61 | 17.08 |
| KRH70872 | Soybean | endoplasmic reticulum | 33.61 | 17.08 |
| KRH75016 | Soybean | endoplasmic reticulum | 33.61 | 17.08 |
| Solyc03g065350.1.1 | Tomato | cytosol, extracellular, peroxisome | 19.67 | 17.08 |
| Solyc02g067080.2.1 | Tomato | extracellular | 34.84 | 16.7 |
| KRH56847 | Soybean | cytosol | 31.97 | 16.32 |
| KRG89491 | Soybean | cytosol | 19.67 | 16.27 |
| KRH03109 | Soybean | cytosol | 31.56 | 16.08 |
| CDX90989 | Canola | cytosol, golgi | 35.25 | 15.69 |
| KRH15845 | Soybean | cytosol | 20.9 | 15.41 |
| CDX70614 | Canola | cytosol, mitochondrion, peroxisome, plastid | 34.84 | 15.21 |
| CDX78633 | Canola | cytosol | 34.84 | 15.02 |
| Bra023520.1-P | Field mustard | golgi | 34.84 | 13.69 |
| CDX85549 | Canola | cytosol | 34.84 | 12.67 |
| CDX85269 | Canola | cytosol | 6.15 | 6.82 |
| AT3G01010.1 | Thale cress | cytosol | 4.1 | 6.33 |
| PGSC0003DMT400069038 | Potato | cytosol | 3.69 | 4.95 |
| CDX86369 | Canola | cytosol | 1.64 | 4.35 |
| Bra025395.1-P | Field mustard | cytosol | 1.64 | 4.21 |
| Bra030352.1-P | Field mustard | extracellular | 0.41 | 1.39 |
| CDY15951 | Canola | extracellular | 0.41 | 1.39 |
Protein Annotations
| EnsemblPlants:Os03t0147150-00 | EnsemblPlantsGene:Os03g0147150 | Gene3D:3.40.50.720 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016616 | GO:GO:0051287 | GO:GO:0055114 |
| InterPro:NAD(P)-bd_dom_sf | InterPro:UDP-Glc/GDP-Man_DH_N | PANTHER:PTHR11374 | PANTHER:PTHR11374:SF30 | PFAM:PF03721 | ProteinID:BAS82286.1 |
| SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0003938D22 | UniProt:A0A0P0VT22 | MapMan:35.1 | : |
Description
Similar to UDP-glucose 6-dehydrogenase. (Os03t0147150-00)
Coordinates
chr3:-:2626993..2628503
Molecular Weight (calculated)
26683.2 Da
IEP (calculated)
12.000
GRAVY (calculated)
-0.432
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLLPFAVSA LFQREARRGV AARRRGGAGK AADLAYWESA ARMIADSSRS SKVVVEKSTV PVKTAEAIEK ILAHNAHVVE FQVLSNLEFL AEGTAVADLR
101: SHRWPRHRRR AGAEGRVRAM GPRRPDHHHQ PLVGGAVQAR RERVLGAEGV IGERHLRALR GHRHRRHGGG DRRCAAAGRR FNCGGRRASV GTARRRCGAP
201: GEWRQLKRLQ DLACMCVHEV SEATGMVCAR GIVQWLTGGG GIDV
101: SHRWPRHRRR AGAEGRVRAM GPRRPDHHHQ PLVGGAVQAR RERVLGAEGV IGERHLRALR GHRHRRHGGG DRRCAAAGRR FNCGGRRASV GTARRRCGAP
201: GEWRQLKRLQ DLACMCVHEV SEATGMVCAR GIVQWLTGGG GIDV
001: MVKICCIGAG YVGGPTMAVM ALKCPEIEVV VVDISEPRIN AWNSDRLPIY EPGLEDVVKQ CRGKNLFFST DVEKHVFESD IVFVSVNTPT KTQGLGAGKA
101: ADLTYWESAA RMIADVSKSS KIVVEKSTVP VRTAEAIEKI LTHNSKGIEF QILSNPEFLA EGTAIKDLYN PDRVLIGGRD TAAGQKAIKA LRDVYAHWVP
201: VEQIICTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVAHA VGTDTRIGPK FLNASVGFGG SCFQKDILNL IYICECNGLP EAANYWKQVV
301: KVNDYQKIRF ANRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC NRLVADKAKL SIYDPQVLEE QIRRDLSMAR FDWDHPVPLQ QIKAEGISEQ
401: VNVVSDAYEA TKDAHGLCVL TEWDEFKSLD FKKIFDNMQK PAFVFDGRNV VDAVKLREIG FIVYSIGKPL DSWLKDMPAV A
101: ADLTYWESAA RMIADVSKSS KIVVEKSTVP VRTAEAIEKI LTHNSKGIEF QILSNPEFLA EGTAIKDLYN PDRVLIGGRD TAAGQKAIKA LRDVYAHWVP
201: VEQIICTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVAHA VGTDTRIGPK FLNASVGFGG SCFQKDILNL IYICECNGLP EAANYWKQVV
301: KVNDYQKIRF ANRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC NRLVADKAKL SIYDPQVLEE QIRRDLSMAR FDWDHPVPLQ QIKAEGISEQ
401: VNVVSDAYEA TKDAHGLCVL TEWDEFKSLD FKKIFDNMQK PAFVFDGRNV VDAVKLREIG FIVYSIGKPL DSWLKDMPAV A
Arabidopsis Description
UGD1UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178WCI2]
SUBAcon: [extracellular,cytosol]
SUBAcon: [extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.