CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

cytosol 2
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69521	Canola	cytosol	76.46	99.46
AT5G15490.1	Thale cress	extracellular, vacuole	96.88	96.88
AT3G01010.1	Thale cress	cytosol	30.83	93.67
Solyc02g088690.2.1	Tomato	nucleus	60.62	92.09
CDX74475	Canola	extracellular	48.75	90.7
Zm00001d034072_P001	Maize	extracellular	90.62	90.62
TraesCS5D01G404300.1	Wheat	golgi	90.62	90.62
KXG37519	Sorghum	cytosol, extracellular	90.62	90.62
PGSC0003DMT400064713	Potato	cytosol	87.5	90.52
TraesCS5B01G399800.1	Wheat	unclear	90.42	90.42
KRH44990	Soybean	nucleus	90.42	90.42
KRH01262	Soybean	nucleus	90.42	90.42
TraesCS5A01G394900.1	Wheat	extracellular, golgi	90.21	90.21
EER95293	Sorghum	extracellular, vacuole	90.21	90.21
HORVU5Hr1G096370.1	Barley	extracellular, golgi	90.21	90.21
PGSC0003DMT400003666	Potato	extracellular, vacuole	90.0	89.81
KRH18404	Soybean	endoplasmic reticulum	89.79	89.79
GSMUA_Achr4P03270_001	Banana	cytosol	70.42	89.66
CDX67427	Canola	cytosol, vacuole	89.58	89.58
Zm00001d013245_P001	Maize	plasma membrane	89.58	89.58
CDY37001	Canola	cytosol, vacuole	89.58	89.58
GSMUA_Achr4P14320_001	Banana	cytosol	76.46	89.51
TraesCS4D01G050600.2	Wheat	extracellular	89.38	89.38
Os12t0443500-01	Rice	plasma membrane	89.38	89.38
Os03t0757900-01	Rice	plasma membrane	89.17	89.17
HORVU4Hr1G021270.1	Barley	extracellular, golgi	89.17	89.17
TraesCS4A01G199200.1	Wheat	extracellular, golgi	89.17	89.17
KRG93627	Soybean	endoplasmic reticulum	88.96	88.96
TraesCS4D01G113800.1	Wheat	extracellular, golgi	88.96	88.96
Os12t0443600-01	Rice	extracellular	88.96	88.96
HORVU4Hr1G008270.1	Barley	extracellular, golgi	88.96	88.96
TraesCS4B01G116200.1	Wheat	extracellular, golgi	88.96	88.96
GSMUA_Achr10P...	Banana	cytosol	69.58	88.83
TraesCS4A01G264600.1	Wheat	extracellular	88.75	88.75
TraesCS4B01G050400.1	Wheat	extracellular	88.75	88.75
GSMUA_Achr6P11090_001	Banana	cytosol	68.12	88.62
GSMUA_Achr4P07270_001	Banana	extracellular, golgi	69.17	88.3
GSMUA_Achr3P30310_001	Banana	cytosol	69.58	88.13
GSMUA_Achr11P...	Banana	cytosol	70.42	87.79
GSMUA_Achr7P26580_001	Banana	cytosol	23.33	86.15
Os03t0425600-00	Rice	plasma membrane	86.04	85.86
PGSC0003DMT400069038	Potato	cytosol	32.29	85.16
GSMUA_Achr6P23920_001	Banana	cytosol	57.92	85.02
Solyc02g067080.2.1	Tomato	extracellular	90.0	84.87
CDX90989	Canola	cytosol, golgi	96.88	84.85
CDX70614	Canola	cytosol, mitochondrion, peroxisome, plastid	98.75	84.79
GSMUA_Achr3P18750_001	Banana	extracellular, golgi	63.54	84.72
CDX78633	Canola	cytosol	98.96	83.92
TraesCS4B01G077100.1	Wheat	cytosol, vacuole	82.71	82.71
Os03t0604200-01	Rice	plasma membrane	82.92	82.57
TraesCS4D01G075600.1	Wheat	cytosol, vacuole	82.71	82.54
TraesCS4A01G237900.1	Wheat	cytosol, vacuole	82.08	81.91
Zm00001d033188_P001	Maize	extracellular	81.88	81.7
CDY16166	Canola	cytosol	81.25	81.08
CDX86369	Canola	cytosol	15.42	80.43
KXG38049	Sorghum	endoplasmic reticulum, extracellular	81.46	78.36
Solyc03g065350.1.1	Tomato	cytosol, extracellular, peroxisome	42.92	73.31
CDX85269	Canola	cytosol	32.08	70.0
CDX85549	Canola	cytosol	97.08	69.45
CDY15951	Canola	extracellular	7.71	51.39
Os04t0581600-01	Rice	cytosol, mitochondrion, peroxisome	20.62	45.21
GSMUA_Achr4P10820_001	Banana	plasma membrane	66.46	42.93
Os03t0147150-00	Rice	plasma membrane	17.71	34.84

Protein Annotations

KEGG:00040+1.1.1.22	KEGG:00053+1.1.1.22	KEGG:00500+1.1.1.22	KEGG:00520+1.1.1.22	Gene3D:1.20.5.100	MapMan:3.13.3.1
Gene3D:3.40.50.720	InterPro:6-PGluconate_DH-like_C_sf	GO:A0A078GIV2	UniProt:A0A078GIV2	EnsemblPlants:CDY26425	ProteinID:CDY26425
ProteinID:CDY26425.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003979	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00035215001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00984	PFAM:PF03720	PFAM:PF03721	PIRSF:PIRSF000124
PIRSF:PIRSF500133	PANTHER:PTHR11374	PANTHER:PTHR11374:SF30	MetaCyc:PWY-7346	SMART:SM00984	SUPFAM:SSF48179
SUPFAM:SSF51735	SUPFAM:SSF52413	TIGRFAMs:TIGR03026	InterPro:UDP-Glc/GDP-Man	InterPro:UDP-Glc/GDP-Man_DH_C	InterPro:UDP-Glc/GDP-Man_DH_C_sf
InterPro:UDP-Glc/GDP-Man_DH_N	InterPro:UDP-Glc/GDP-Man_DH_dimer	InterPro:UDPglc_DH_euk	UniPathway:UPA00038	UniParc:UPI0004EAF724	:

Description

BnaC09g42430DUDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A078GIV2]

Coordinates

chrLK032190:-:74093..76338

Molecular Weight (calculated)

53073.9 Da

IEP (calculated)

6.383

GRAVY (calculated)

-0.072

Length

480 amino acids

Sequence
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPSVEVA VVDISVPRIT AWNSDQLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFK PDRVLIGGRE TPEGFAAVKA LKDVYSQWVP
201: EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVTEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKARI SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV
401: SVAWDAYAAT KDAHGICILT EWDEFKKLDY EKIFDNMQKP AFVFDGRNVV DAEKLRKIGF IVYSIGKPLD QWLKDMPALA

Best Arabidopsis Sequence Match ( AT5G15490.1 )
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPSVEVA VVDISVPRIN AWNSDQLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFM PDRVLIGGRE TTEGFAAVKA LKDIYAQWVP
201: EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVSEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKARL SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV
401: SVAWDAYTAT KDAHGICILT EWDEFKKLDF QRIFENMQKP AFVFDGRNVV DADKLREIGF IVYSIGKPLD QWLKDMPALA

Arabidopsis Description

UGD3UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UJW9]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.