CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G01010.1	Thale cress	cytosol	40.38	94.3
GSMUA_Achr7P26580_001	Banana	cytosol	30.08	85.38
PGSC0003DMT400069038	Potato	cytosol	42.01	85.16
Bra008695.1-P	Field mustard	extracellular, golgi	100.0	76.88
CDY26425	Canola	extracellular, golgi	99.46	76.46
GSMUA_Achr4P14320_001	Banana	cytosol	83.47	75.12
AT5G15490.1	Thale cress	extracellular, vacuole	96.75	74.38
GSMUA_Achr4P03270_001	Banana	cytosol	75.61	74.01
GSMUA_Achr10P...	Banana	cytosol	74.53	73.14
GSMUA_Achr6P11090_001	Banana	cytosol	72.9	72.9
GSMUA_Achr3P30310_001	Banana	cytosol	74.8	72.82
GSMUA_Achr11P...	Banana	cytosol	75.34	72.21
PGSC0003DMT400064713	Potato	cytosol	89.97	71.55
TraesCS5D01G404300.1	Wheat	golgi	90.51	69.58
TraesCS5B01G399800.1	Wheat	unclear	90.24	69.38
TraesCS4B01G116200.1	Wheat	extracellular, golgi	89.97	69.17
TraesCS4A01G199200.1	Wheat	extracellular, golgi	89.97	69.17
TraesCS5A01G394900.1	Wheat	extracellular, golgi	89.97	69.17
KXG37519	Sorghum	cytosol, extracellular	89.97	69.17
HORVU5Hr1G096370.1	Barley	extracellular, golgi	89.97	69.17
HORVU4Hr1G021270.1	Barley	extracellular, golgi	89.97	69.17
TraesCS4D01G113800.1	Wheat	extracellular, golgi	89.7	68.96
Zm00001d034072_P001	Maize	extracellular	89.7	68.96
EER95293	Sorghum	extracellular, vacuole	89.7	68.96
GSMUA_Achr6P23920_001	Banana	cytosol	60.98	68.81
TraesCS4D01G050600.2	Wheat	extracellular	89.43	68.75
KRH01262	Soybean	nucleus	89.16	68.54
KRH44990	Soybean	nucleus	89.16	68.54
Os12t0443500-01	Rice	plasma membrane	89.16	68.54
Zm00001d013245_P001	Maize	plasma membrane	88.89	68.33
HORVU4Hr1G008270.1	Barley	extracellular, golgi	88.89	68.33
TraesCS4A01G264600.1	Wheat	extracellular	88.62	68.12
Os12t0443600-01	Rice	extracellular	88.62	68.12
TraesCS4B01G050400.1	Wheat	extracellular	88.35	67.92
Os03t0757900-01	Rice	plasma membrane	88.35	67.92
KRH18404	Soybean	endoplasmic reticulum	87.8	67.5
PGSC0003DMT400003666	Potato	extracellular, vacuole	87.8	67.36
CDX67427	Canola	cytosol, vacuole	87.53	67.29
CDY37001	Canola	cytosol, vacuole	87.53	67.29
KRG93627	Soybean	endoplasmic reticulum	86.72	66.67
Os03t0425600-00	Rice	plasma membrane	85.64	65.7
CDX70614	Canola	cytosol, mitochondrion, peroxisome, plastid	99.19	65.47
CDX78633	Canola	cytosol	99.46	64.84
CDX90989	Canola	cytosol, golgi	95.94	64.6
Solyc02g067080.2.1	Tomato	extracellular	88.89	64.44
TraesCS4B01G077100.1	Wheat	cytosol, vacuole	80.76	62.08
Os03t0604200-01	Rice	plasma membrane	80.76	61.83
TraesCS4D01G075600.1	Wheat	cytosol, vacuole	80.49	61.75
Zm00001d033188_P001	Maize	extracellular	80.22	61.54
TraesCS4A01G237900.1	Wheat	cytosol, vacuole	79.95	61.33
GSMUA_Achr4P07270_001	Banana	extracellular, golgi	62.33	61.17
CDY16166	Canola	cytosol	78.86	60.5
Solyc02g088690.2.1	Tomato	nucleus	50.41	58.86
KXG38049	Sorghum	endoplasmic reticulum, extracellular	79.4	58.72
GSMUA_Achr3P18750_001	Banana	extracellular, golgi	55.83	57.22
CDX85549	Canola	cytosol	96.21	52.91
CDX74475	Canola	extracellular	34.42	49.22
Solyc03g065350.1.1	Tomato	cytosol, extracellular, peroxisome	37.13	48.75
CDX85269	Canola	cytosol	23.58	39.55
Os04t0581600-01	Rice	cytosol, mitochondrion, peroxisome	21.68	36.53
GSMUA_Achr4P10820_001	Banana	plasma membrane	58.81	29.21
Os03t0147150-00	Rice	plasma membrane	17.34	26.23
CDX86369	Canola	cytosol	2.71	10.87
CDY15951	Canola	extracellular	1.36	6.94

Protein Annotations

KEGG:00040+1.1.1.22	KEGG:00053+1.1.1.22	KEGG:00500+1.1.1.22	KEGG:00520+1.1.1.22	Gene3D:1.20.5.100	MapMan:3.13.3.1
Gene3D:3.40.50.720	InterPro:6-PGluconate_DH-like_C_sf	GO:A0A078BXP8	EnsemblPlants:CDX69521	ProteinID:CDX69521	ProteinID:CDX69521.1
GO:GO:0000166	GO:GO:0000271	GO:GO:0003674	GO:GO:0003824	GO:GO:0003979	GO:GO:0005488
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00135520001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00984	PFAM:PF03720	PFAM:PF03721
PIRSF:PIRSF000124	PIRSF:PIRSF500134	PANTHER:PTHR11374	PANTHER:PTHR11374:SF30	MetaCyc:PWY-7346	SMART:SM00984
SUPFAM:SSF48179	SUPFAM:SSF51735	SUPFAM:SSF52413	TIGRFAMs:TIGR03026	InterPro:UDP-Glc/GDP-Man	InterPro:UDP-Glc/GDP-Man_DH_C
InterPro:UDP-Glc/GDP-Man_DH_C_sf	InterPro:UDP-Glc/GDP-Man_DH_N	InterPro:UDP-Glc/GDP-Man_DH_dimer	InterPro:UDPglc_DH_bac	UniPathway:UPA00038	UniParc:UPI0004EE7834

Description

BnaA10g18700D

Coordinates

chrLK031790:+:611603..612970

Molecular Weight (calculated)

41163.5 Da

IEP (calculated)

6.179

GRAVY (calculated)

-0.144

Length

369 amino acids

Sequence
(BLAST)

001: MIADVSVSDK IVVEKSTVPV KTAEAIEKIL THNSKGIKFQ ILSNPEFLAE GTAIEDLFKP DRVLIGGRET PEGFAAVKAL KDVYSQWVPE ERILTTNLWS
101: AELSKLAANA FLAQRISSVN AMSALCEATG ANVSEVSYAV GKDSRIGPKF LNSSVGFGGS CFQKDILNLV YICECNGLPE VAEYWKQVIK INDYQKTRFV
201: NRIVSSMFNT VSNKKIAVLG FAFKKDTGDT RETPAIDVCK GLLGDKARIS IYDPQVTEEQ IQRDLTMNKF DWDHPLHLQP MSPTTVKQVS VAWDAYAATK
301: DAHGICILTE WDEFKKLDYE KIFENMQKPA FVFDGRNVVD AEKLRKIGFI VYSIGKPLDQ WLKDMPALA

Best Arabidopsis Sequence Match ( AT1G26570.1 )
(BLAST)

001: MVKICCIGAG YVGGPTMAVM ALKCPEIEVV VVDISEPRIN AWNSDRLPIY EPGLEDVVKQ CRGKNLFFST DVEKHVFESD IVFVSVNTPT KTQGLGAGKA
101: ADLTYWESAA RMIADVSKSS KIVVEKSTVP VRTAEAIEKI LTHNSKGIEF QILSNPEFLA EGTAIKDLYN PDRVLIGGRD TAAGQKAIKA LRDVYAHWVP
201: VEQIICTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVAHA VGTDTRIGPK FLNASVGFGG SCFQKDILNL IYICECNGLP EAANYWKQVV
301: KVNDYQKIRF ANRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC NRLVADKAKL SIYDPQVLEE QIRRDLSMAR FDWDHPVPLQ QIKAEGISEQ
401: VNVVSDAYEA TKDAHGLCVL TEWDEFKSLD FKKIFDNMQK PAFVFDGRNV VDAVKLREIG FIVYSIGKPL DSWLKDMPAV A

Arabidopsis Description

UGD1UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178WCI2]
SUBAcon: [extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.