CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86369	Canola	cytosol	37.27	89.13
Bra025395.1-P	Field mustard	cytosol	38.18	88.42
CDY15951	Canola	extracellular	14.09	43.06
PGSC0003DMT400069038	Potato	cytosol	30.45	36.81
AT3G29360.1	Thale cress	cytosol, vacuole	71.82	32.92
GSMUA_Achr4P07270_001	Banana	extracellular, golgi	55.91	32.71
CDY26425	Canola	extracellular, golgi	70.0	32.08
KRH18404	Soybean	endoplasmic reticulum	69.55	31.88
KRG93627	Soybean	endoplasmic reticulum	69.55	31.88
KRH44990	Soybean	nucleus	69.09	31.67
CDX67427	Canola	cytosol, vacuole	68.64	31.46
KRH01262	Soybean	nucleus	68.64	31.46
CDY37001	Canola	cytosol, vacuole	68.64	31.46
KXG37519	Sorghum	cytosol, extracellular	68.18	31.25
PGSC0003DMT400003666	Potato	extracellular, vacuole	68.18	31.18
Zm00001d034072_P001	Maize	extracellular	67.73	31.04
Zm00001d013245_P001	Maize	plasma membrane	67.73	31.04
TraesCS4D01G113800.1	Wheat	extracellular, golgi	66.36	30.42
EER95293	Sorghum	extracellular, vacuole	66.36	30.42
TraesCS4B01G116200.1	Wheat	extracellular, golgi	66.36	30.42
TraesCS4A01G199200.1	Wheat	extracellular, golgi	66.36	30.42
HORVU4Hr1G021270.1	Barley	extracellular, golgi	66.36	30.42
Os12t0443600-01	Rice	extracellular	65.91	30.21
HORVU5Hr1G096370.1	Barley	extracellular, golgi	65.91	30.21
HORVU4Hr1G008270.1	Barley	extracellular, golgi	65.91	30.21
Os12t0443500-01	Rice	plasma membrane	65.45	30.0
Os03t0757900-01	Rice	plasma membrane	65.45	30.0
TraesCS4B01G050400.1	Wheat	extracellular	65.45	30.0
TraesCS5B01G399800.1	Wheat	unclear	65.45	30.0
PGSC0003DMT400064713	Potato	cytosol	63.18	29.96
TraesCS5A01G394900.1	Wheat	extracellular, golgi	65.0	29.79
TraesCS5D01G404300.1	Wheat	golgi	65.0	29.79
TraesCS4A01G264600.1	Wheat	extracellular	64.55	29.58
TraesCS4D01G050600.2	Wheat	extracellular	64.55	29.58
Solyc02g067080.2.1	Tomato	extracellular	67.73	29.27
Solyc02g088690.2.1	Tomato	nucleus	41.82	29.11
Os03t0425600-00	Rice	plasma membrane	63.64	29.11
GSMUA_Achr3P18750_001	Banana	extracellular, golgi	47.27	28.89
Os03t0604200-01	Rice	plasma membrane	60.91	27.8
CDX70614	Canola	cytosol, mitochondrion, peroxisome, plastid	70.45	27.73
CDX78633	Canola	cytosol	70.91	27.56
CDX74475	Canola	extracellular	32.27	27.52
Zm00001d033188_P001	Maize	extracellular	59.09	27.03
TraesCS4D01G075600.1	Wheat	cytosol, vacuole	59.09	27.03
TraesCS4A01G237900.1	Wheat	cytosol, vacuole	59.09	27.03
TraesCS4B01G077100.1	Wheat	cytosol, vacuole	58.64	26.88
CDX90989	Canola	cytosol, golgi	66.36	26.64
KXG38049	Sorghum	endoplasmic reticulum, extracellular	60.0	26.45
CDY16166	Canola	cytosol	56.82	25.99
GSMUA_Achr4P14320_001	Banana	cytosol	45.0	24.15
GSMUA_Achr6P23920_001	Banana	cytosol	35.45	23.85
Solyc03g065350.1.1	Tomato	cytosol, extracellular, peroxisome	30.45	23.84
CDX69521	Canola	cytosol	39.55	23.58
GSMUA_Achr11P...	Banana	cytosol	40.45	23.12
GSMUA_Achr7P26580_001	Banana	cytosol	13.64	23.08
GSMUA_Achr4P03270_001	Banana	cytosol	38.18	22.28
GSMUA_Achr3P30310_001	Banana	cytosol	38.18	22.16
CDX85549	Canola	cytosol	67.27	22.06
GSMUA_Achr6P11090_001	Banana	cytosol	36.82	21.95
GSMUA_Achr10P...	Banana	cytosol	37.27	21.81
GSMUA_Achr4P10820_001	Banana	plasma membrane	55.0	16.29
Os03t0147150-00	Rice	plasma membrane	6.82	6.15
Os04t0581600-01	Rice	cytosol, mitochondrion, peroxisome	5.91	5.94

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	GO:A0A078DAF8	EnsemblPlants:CDX85269	ProteinID:CDX85269	ProteinID:CDX85269.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00142913001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF03721
PANTHER:PTHR11374	PANTHER:PTHR11374:SF30	SUPFAM:SSF51735	SUPFAM:SSF52413	InterPro:UDP-Glc/GDP-Man_DH_C_sf	InterPro:UDP-Glc/GDP-Man_DH_N
UniParc:UPI0004EDB2E1	:	:	:	:	:

Description

BnaC07g25800D

Coordinates

chrLK031841:-:659147..660173

Molecular Weight (calculated)

25092.4 Da

IEP (calculated)

4.818

GRAVY (calculated)

-0.068

Length

220 amino acids

Sequence
(BLAST)

001: MFFFGEDICE DICCIRAGYV SGPTMAVVAL KCPDIEVAVV DISVPRINAW NSDQLPIYEP SLDEVIKQCR GKNLFSSTDV DKHVRAFEAC GRRFLGSEDF
101: FHLLMQCQLC VKPLTLMSRK WLTRLKDILN LVYICECNGL PEVAEYWKQS PAIDVFKGLL GDKARLCIYD PQVTEDQIQR DLSMNKFEWD HPLHLQPMSP
201: TTVKQESPLD AWLKDMPAVA

Best Arabidopsis Sequence Match ( AT5G39320.1 )
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPDIEVA VVDISVPRIN AWNSDQLPIY EPGLDDIVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTTGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LMHNSKGIKF QILSNPEFLA EGTAIADLFN PDRVLIGGRE TPEGFKAVQT LKEVYANWVP
201: EGQIITTNLW SAELSKLAAN AFLAQRISSV NAMSALCEST GADVTQVSYA VGTDSRIGSK FLNASVGFGG SCFQKDILNL VYICQCNGLP EVAEYWKQVI
301: KINDYQKNRF VNRIVSSMFN TVSNKKVAIL GFAFKKDTGD TRETPAIDVC KGLLGDKAQI SIYDPQVTEE QIQRDLSMKK FDWDHPLHLQ PMSPTTVKQV
401: SVTWDAYEAT KDAHAVCVLT EWDEFKSLDY QKIFDNMQKP AFIFDGRNIM NVNKLREIGF IVYSIGKPLD PWLKDMPAFV

Arabidopsis Description

UGD4UDP-glucose 6-dehydrogenase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM01]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.