Factsheet for Bra025395.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86369	Canola	cytosol	94.74	97.83
Bra030352.1-P	Field mustard	extracellular	31.58	41.67
CDX85269	Canola	cytosol	88.42	38.18
Bra026264.1-P	Field mustard	extracellular, vacuole	68.42	26.32
Solyc02g088690.2.1	Tomato	nucleus	67.37	20.25
GSMUA_Achr3P18750_001	Banana	extracellular, golgi	75.79	20.0
GSMUA_Achr4P07270_001	Banana	extracellular, golgi	78.95	19.95
AT3G29360.1	Thale cress	cytosol, vacuole	84.21	16.67
Bra006303.1-P	Field mustard	extracellular, vacuole	82.11	16.25
KXG37519	Sorghum	cytosol, extracellular	82.11	16.25
KRH44990	Soybean	nucleus	82.11	16.25
KRH18404	Soybean	endoplasmic reticulum	82.11	16.25
KRG93627	Soybean	endoplasmic reticulum	82.11	16.25
Bra028430.1-P	Field mustard	cytosol, vacuole	82.11	16.25
PGSC0003DMT400003666	Potato	extracellular, vacuole	82.11	16.22
Bra008695.1-P	Field mustard	extracellular, golgi	81.05	16.04
Zm00001d013245_P001	Maize	plasma membrane	81.05	16.04
Zm00001d034072_P001	Maize	extracellular	81.05	16.04
KRH01262	Soybean	nucleus	81.05	16.04
Bra028234.1-P	Field mustard	extracellular, vacuole	80.0	15.83
Os12t0443600-01	Rice	extracellular	78.95	15.62
Os12t0443500-01	Rice	plasma membrane	78.95	15.62
Os03t0757900-01	Rice	plasma membrane	78.95	15.62
TraesCS4B01G050400.1	Wheat	extracellular	78.95	15.62
HORVU4Hr1G008270.1	Barley	extracellular, golgi	78.95	15.62
TraesCS5D01G404300.1	Wheat	golgi	77.89	15.42
HORVU5Hr1G096370.1	Barley	extracellular, golgi	77.89	15.42
TraesCS4D01G050600.2	Wheat	extracellular	77.89	15.42
EER95293	Sorghum	extracellular, vacuole	77.89	15.42
TraesCS5A01G394900.1	Wheat	extracellular, golgi	77.89	15.42
TraesCS5B01G399800.1	Wheat	unclear	77.89	15.42
TraesCS4A01G264600.1	Wheat	extracellular	76.84	15.21
Bra024708.1-P	Field mustard	cytosol, extracellular	76.84	15.18
HORVU4Hr1G021270.1	Barley	extracellular, golgi	75.79	15.0
TraesCS4B01G116200.1	Wheat	extracellular, golgi	75.79	15.0
TraesCS4A01G199200.1	Wheat	extracellular, golgi	75.79	15.0
TraesCS4D01G113800.1	Wheat	extracellular, golgi	75.79	15.0
TraesCS4A01G237900.1	Wheat	cytosol, vacuole	73.68	14.55
Zm00001d033188_P001	Maize	extracellular	73.68	14.55
Os03t0425600-00	Rice	plasma membrane	73.68	14.55
TraesCS4D01G075600.1	Wheat	cytosol, vacuole	73.68	14.55
Os03t0604200-01	Rice	plasma membrane	73.68	14.52
TraesCS4B01G077100.1	Wheat	cytosol, vacuole	72.63	14.38
KXG38049	Sorghum	endoplasmic reticulum, extracellular	74.74	14.23
Solyc02g067080.2.1	Tomato	extracellular	75.79	14.15
Solyc03g065350.1.1	Tomato	cytosol, extracellular, peroxisome	41.05	13.88
PGSC0003DMT400064713	Potato	cytosol	64.21	13.15
Bra023520.1-P	Field mustard	golgi	73.68	11.27
GSMUA_Achr7P26580_001	Banana	cytosol	14.74	10.77
GSMUA_Achr4P10820_001	Banana	plasma membrane	80.0	10.23
GSMUA_Achr6P23920_001	Banana	cytosol	33.68	9.79
GSMUA_Achr3P30310_001	Banana	cytosol	36.84	9.23
GSMUA_Achr4P03270_001	Banana	cytosol	35.79	9.02
GSMUA_Achr11P...	Banana	cytosol	35.79	8.83
GSMUA_Achr6P11090_001	Banana	cytosol	33.68	8.67
GSMUA_Achr10P...	Banana	cytosol	33.68	8.51
GSMUA_Achr4P14320_001	Banana	cytosol	35.79	8.29
Os03t0147150-00	Rice	plasma membrane	4.21	1.64
Os04t0581600-01	Rice	cytosol, mitochondrion, peroxisome	1.05	0.46
PGSC0003DMT400069038	Potato	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EnsemblPlantsGene:Bra025395	EnsemblPlants:Bra025395.1	EnsemblPlants:Bra025395.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016616
GO:GO:0051287	GO:GO:0055114	UniProt:M4E9D9	InterPro:NAD(P)-bd_dom_sf	PFAM:PF03721	PANTHER:PTHR11374
PANTHER:PTHR11374:SF30	SUPFAM:SSF51735	InterPro:UDP-Glc/GDP-Man_DH_N	UniParc:UPI000253FA7A	:	:

Description

AT5G39320 (E=3e-037) | UDP-glucose 6-dehydrogenase, putative

Coordinates

chrA06:+:21826763..21827606

Molecular Weight (calculated)

10317.5 Da

IEP (calculated)

4.509

GRAVY (calculated)

0.039

Length

95 amino acids

Sequence
(BLAST)

1: MQKNGEDICC IGAGYVSGPT MAVVALKCPD IEVAVVDISV PRINAWNSDQ LPIYEPGLDE VVKQCRGKNL FFSTDVDKHI GKPLDAWLKD MPAVA

Best Arabidopsis Sequence Match ( AT5G39320.1 )
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPDIEVA VVDISVPRIN AWNSDQLPIY EPGLDDIVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTTGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LMHNSKGIKF QILSNPEFLA EGTAIADLFN PDRVLIGGRE TPEGFKAVQT LKEVYANWVP
201: EGQIITTNLW SAELSKLAAN AFLAQRISSV NAMSALCEST GADVTQVSYA VGTDSRIGSK FLNASVGFGG SCFQKDILNL VYICQCNGLP EVAEYWKQVI
301: KINDYQKNRF VNRIVSSMFN TVSNKKVAIL GFAFKKDTGD TRETPAIDVC KGLLGDKAQI SIYDPQVTEE QIQRDLSMKK FDWDHPLHLQ PMSPTTVKQV
401: SVTWDAYEAT KDAHAVCVLT EWDEFKSLDY QKIFDNMQKP AFIFDGRNIM NVNKLREIGF IVYSIGKPLD PWLKDMPAFV

Arabidopsis Description

UGD4UDP-glucose 6-dehydrogenase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM01]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.