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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • golgi 1
  • cytosol 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, golgi, mitochondrion, plastid
BaCelLo:plastid
EpiLoc:golgi
MultiLoc:cytosol
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr3P18750_001
GSMUA_Achr3P30310_001
GSMUA_Achr4P03270_001
GSMUA_Achr4P07270_001
GSMUA_Achr4P10820_001
GSMUA_Achr4P14320_001
GSMUA_Achr6P11090_001
GSMUA_Achr6P23920_001
GSMUA_Achr7P26580_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G39320.1 GSMUA_Achr10P... AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr11P... AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr3P18750_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr3P30310_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr4P03270_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr4P07270_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr4P10820_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr4P14320_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr6P11090_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr6P23920_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr7P26580_001 AT1G26570.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P11090_001 Banana cytosol 79.48 82.93
GSMUA_Achr4P14320_001 Banana cytosol 85.97 80.73
GSMUA_Achr10P... Banana cytosol 78.18 80.05
GSMUA_Achr6P23920_001 Banana cytosol 67.79 79.82
GSMUA_Achr4P03270_001 Banana cytosol 77.66 79.31
GSMUA_Achr3P30310_001 Banana cytosol 76.62 77.84
CDX69521 Canola cytosol 72.21 75.34
GSMUA_Achr4P07270_001 Banana extracellular, golgi 70.91 72.61
GSMUA_Achr7P26580_001 Banana cytosol 24.42 72.31
TraesCS4A01G199200.1 Wheat extracellular, golgi 90.13 72.29
HORVU4Hr1G021270.1 Barley extracellular, golgi 90.13 72.29
TraesCS4D01G113800.1 Wheat extracellular, golgi 89.87 72.08
TraesCS4B01G116200.1 Wheat extracellular, golgi 89.87 72.08
EER95293 Sorghum extracellular, vacuole 89.87 72.08
PGSC0003DMT400069038 Potato cytosol 34.03 71.98
GSMUA_Achr3P18750_001 Banana extracellular, golgi 67.01 71.67
CDY26425 Canola extracellular, golgi 87.79 70.42
Bra008695.1-P Field mustard extracellular, golgi 87.79 70.42
Bra006303.1-P Field mustard extracellular, vacuole 87.53 70.21
AT5G15490.1 Thale cress extracellular, vacuole 87.01 69.79
AT3G01010.1 Thale cress cytosol 28.57 69.62
PGSC0003DMT400003666 Potato extracellular, vacuole 86.75 69.44
PGSC0003DMT400064713 Potato cytosol 83.64 69.4
Os03t0425600-00 Rice plasma membrane 86.49 69.23
KRH18404 Soybean endoplasmic reticulum 86.23 69.17
KRH01262 Soybean nucleus 85.97 68.96
KRH70872 Soybean endoplasmic reticulum 85.97 68.96
KRH44990 Soybean nucleus 85.71 68.75
KRH75016 Soybean endoplasmic reticulum 85.71 68.75
Solyc02g088690.2.1 Tomato nucleus 56.36 68.67
KRG93627 Soybean endoplasmic reticulum 85.45 68.54
PGSC0003DMT400087395 Potato cytosol, golgi 85.19 68.33
AT3G29360.1 Thale cress cytosol, vacuole 84.68 67.92
Solyc03g115380.1.1 Tomato nucleus, unclear 84.42 67.71
Solyc06g069550.1.1 Tomato extracellular 84.42 67.71
CDX67427 Canola cytosol, vacuole 83.9 67.29
Bra028430.1-P Field mustard cytosol, vacuole 83.9 67.29
CDY37001 Canola cytosol, vacuole 83.9 67.29
PGSC0003DMT400083187 Potato extracellular 83.9 67.29
Bra028234.1-P Field mustard extracellular, vacuole 83.38 66.88
AT5G39320.1 Thale cress extracellular 82.86 66.46
Solyc02g067080.2.1 Tomato extracellular 87.01 65.82
AT1G26570.1 Thale cress cytosol, extracellular 79.74 63.83
CDY16166 Canola cytosol 79.22 63.41
Bra024708.1-P Field mustard cytosol, extracellular 78.96 63.2
KRH03109 Soybean cytosol 78.18 62.84
KRH15845 Soybean cytosol 53.77 62.54
KRH56847 Soybean cytosol 76.62 61.72
KRG89491 Soybean cytosol 47.27 61.69
CDX74475 Canola extracellular 40.52 60.47
CDX70614 Canola cytosol, mitochondrion, peroxisome, plastid 87.53 60.29
CDX78633 Canola cytosol 87.79 59.72
CDX90989 Canola cytosol, golgi 84.94 59.67
Bra026264.1-P Field mustard extracellular, vacuole 38.18 59.51
Solyc03g065350.1.1 Tomato cytosol, extracellular, peroxisome 40.78 55.87
Bra023520.1-P Field mustard golgi 84.94 52.66
CDX85549 Canola cytosol 85.19 48.88
CDX85269 Canola cytosol 23.12 40.45
Bra025395.1-P Field mustard cytosol 8.83 35.79
GSMUA_Achr4P10820_001 Banana plasma membrane 68.57 35.53
CDX86369 Canola cytosol 8.31 34.78
Bra030352.1-P Field mustard extracellular 3.12 16.67
CDY15951 Canola extracellular 3.12 16.67
Protein Annotations
KEGG:00040+1.1.1.22KEGG:00053+1.1.1.22KEGG:00520+1.1.1.22Gene3D:1.20.5.100MapMan:3.13.3.1Gene3D:3.40.50.720
InterPro:6-PGluconate_DH-like_C_sfGO:GO:0000166GO:GO:0000271GO:GO:0003674GO:GO:0003824GO:GO:0003979
GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0016491
GO:GO:0016616GO:GO:0051287GO:GO:0055114EnsemblPlantsGene:GSMUA_Achr11G09580_001EnsemblPlants:GSMUA_Achr11P09580_001EnsemblPlants:GSMUA_Achr11T09580_001
UniProt:M0RQT8InterPro:NAD(P)-bd_dom_sfPFAM:PF00984PFAM:PF03720PFAM:PF03721PIRSF:PIRSF000124
PIRSF:PIRSF500134PANTHER:PTHR11374PANTHER:PTHR11374:SF30SMART:SM00984SUPFAM:SSF48179SUPFAM:SSF51735
SUPFAM:SSF52413TIGRFAMs:TIGR03026InterPro:UDP-Glc/GDP-ManInterPro:UDP-Glc/GDP-Man_DH_CInterPro:UDP-Glc/GDP-Man_DH_C_sfInterPro:UDP-Glc/GDP-Man_DH_N
InterPro:UDP-Glc/GDP-Man_DH_dimerInterPro:UDPglc_DH_bacUniParc:UPI00029534B7:::
Description
UDP-glucose 6-dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr11G09580_001]
Coordinates
chr11:-:7441693..7447698
Molecular Weight (calculated)
42552.8 Da
IEP (calculated)
6.669
GRAVY (calculated)
-0.118
Length
385 amino acids
Sequence
(BLAST)
001: MVKICCIGAG YQCRGKNLFF STDIEKHVSE ADIIFVSVNT PTKTRGLGAG KAADLTYWES AARMIADVSK SDKIILSNPE FLAEGTAMQD LFKPDRVLIG
101: GRETPEGRKA VQALKDVYAH WVPEDRILTT NLWSAELSKL AANAFLAQRI SSINAISALC EATGANVSEV AYAVGKDSRI GPKFLNASVG FGGSCFQKDI
201: LNLVYISECN GLSVVANYWK QVIQINDYQK NRFVNRVVSS MFNTVSGKKI AVLGFAFKKD TGDTRETPAI DVTDDQIQRD LATNKFDWDH PVHLQPMSPT
301: AVKQVSIAWD AYEAAKGAHG VCILTEWDEF KELDYRRIYD DMQKPAFVFD GRNVVDPEKL RAIGFIVYAI GKPLDSWLKD LPAVA
Best Arabidopsis Sequence Match ( AT5G15490.1 )
(BLAST)
001: MVKICCIGAG YVGGPTMAVI ALKCPSVEVA VVDISVPRIN AWNSDQLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFM PDRVLIGGRE TTEGFAAVKA LKDIYAQWVP
201: EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVSEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKARL SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV
401: SVAWDAYTAT KDAHGICILT EWDEFKKLDF QRIFENMQKP AFVFDGRNVV DADKLREIGF IVYSIGKPLD QWLKDMPALA
Arabidopsis Description
UGD3UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UJW9]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.