CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
golgi 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P26580_001	Banana	cytosol	27.12	61.54
KRH15845	Soybean	cytosol	58.64	52.27
GSMUA_Achr4P14320_001	Banana	cytosol	72.54	52.2
KRH75016	Soybean	endoplasmic reticulum	82.71	50.83
KRH70872	Soybean	endoplasmic reticulum	82.71	50.83
GSMUA_Achr6P23920_001	Banana	cytosol	56.27	50.76
GSMUA_Achr4P03270_001	Banana	cytosol	63.73	49.87
GSMUA_Achr3P30310_001	Banana	cytosol	62.71	48.81
VIT_01s0011g00690.t01	Wine grape	cytosol, extracellular	79.32	48.75
KRH44990	Soybean	nucleus	78.98	48.54
KRG93627	Soybean	endoplasmic reticulum	78.98	48.54
TraesCS5B01G399800.1	Wheat	unclear	78.64	48.33
KRH01262	Soybean	nucleus	78.64	48.33
KRH18404	Soybean	endoplasmic reticulum	78.31	48.12
HORVU4Hr1G021270.1	Barley	extracellular, golgi	78.31	48.12
TraesCS4A01G199200.1	Wheat	extracellular, golgi	78.31	48.12
TraesCS4B01G116200.1	Wheat	extracellular, golgi	78.31	48.12
TraesCS5D01G404300.1	Wheat	golgi	78.31	48.12
HORVU5Hr1G096370.1	Barley	extracellular, golgi	77.97	47.92
TraesCS4D01G113800.1	Wheat	extracellular, golgi	77.97	47.92
TraesCS5A01G394900.1	Wheat	extracellular, golgi	77.97	47.92
Os12t0443600-01	Rice	extracellular	77.97	47.92
Zm00001d013245_P001	Maize	plasma membrane	77.63	47.71
HORVU4Hr1G008270.1	Barley	extracellular, golgi	77.63	47.71
EER95293	Sorghum	extracellular, vacuole	77.63	47.71
TraesCS4A01G264600.1	Wheat	extracellular	77.29	47.5
TraesCS4B01G050400.1	Wheat	extracellular	77.29	47.5
Zm00001d034072_P001	Maize	extracellular	77.29	47.5
Os12t0443500-01	Rice	plasma membrane	77.29	47.5
Os03t0757900-01	Rice	plasma membrane	77.29	47.5
KXG37519	Sorghum	cytosol, extracellular	77.29	47.5
GSMUA_Achr6P11090_001	Banana	cytosol	59.32	47.43
TraesCS4D01G050600.2	Wheat	extracellular	76.95	47.29
GSMUA_Achr11P...	Banana	cytosol	61.69	47.27
GSMUA_Achr10P...	Banana	cytosol	60.0	47.07
Os03t0425600-00	Rice	plasma membrane	74.24	45.53
AT1G26570.1	Thale cress	cytosol, extracellular	73.22	44.91
GSMUA_Achr4P07270_001	Banana	extracellular, golgi	56.61	44.41
Bra024708.1-P	Field mustard	cytosol, extracellular	71.53	43.87
Os03t0604200-01	Rice	plasma membrane	71.19	43.57
TraesCS4A01G237900.1	Wheat	cytosol, vacuole	70.85	43.45
CDY16166	Canola	cytosol	70.85	43.45
Zm00001d033188_P001	Maize	extracellular	70.85	43.45
TraesCS4D01G075600.1	Wheat	cytosol, vacuole	70.51	43.24
TraesCS4B01G077100.1	Wheat	cytosol, vacuole	70.17	43.12
GSMUA_Achr3P18750_001	Banana	extracellular, golgi	51.86	42.5
KRH03109	Soybean	cytosol	67.12	41.34
KXG38049	Sorghum	endoplasmic reticulum, extracellular	69.83	41.28
KRH56847	Soybean	cytosol	66.1	40.8
Os04t0581600-01	Rice	cytosol, mitochondrion, peroxisome	16.95	22.83
GSMUA_Achr4P10820_001	Banana	plasma membrane	52.54	20.86
Os03t0147150-00	Rice	plasma membrane	16.27	19.67

Protein Annotations

Gene3D:1.20.5.100	MapMan:3.13.3.1	Gene3D:3.40.50.720	InterPro:6-PGluconate_DH-like_C_sf	EMBL:ACUP02012213	EnsemblPlantsGene:GLYMA_20G026400
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006024	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	UniProt:K7N0Z5
EnsemblPlants:KRG89491	ProteinID:KRG89491	ProteinID:KRG89491.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00984	PFAM:PF03720
PFAM:PF03721	PANTHER:PTHR11374	PANTHER:PTHR11374:SF30	SMART:SM00984	SUPFAM:SSF48179	SUPFAM:SSF51735
SUPFAM:SSF52413	InterPro:UDP-Glc/GDP-Man_DH_C	InterPro:UDP-Glc/GDP-Man_DH_C_sf	InterPro:UDP-Glc/GDP-Man_DH_N	InterPro:UDP-Glc/GDP-Man_DH_dimer	UniParc:UPI000296627C

Description

hypothetical protein

Coordinates

chr20:+:2909130..2911928

Molecular Weight (calculated)

32967.8 Da

IEP (calculated)

6.905

GRAVY (calculated)

-0.246

Length

295 amino acids

Sequence
(BLAST)

001: MIADVSKSDK IVVEKSTGPV KTEEAIERIL THNNKGINFT ILSNPEFLAK GTTIDDLFKP DRVLIWGRET PQGQKVIQPL KELAASTFMA QRITSVNAMS
101: ALCETIDADV SSVGFGGSCF QKDIMNLVYI CECNGLPKVP NYWKQVVKVN DYQKPRFVNR VKDTGDTRET STIDMCKGLL GDKAKLSIYD PQVTEDQITK
201: DLSMRKFDKD HPAHLQPPSP TSIKLLSVVW DAYDALKDAH GACILTEWDA MQKPTFIFDG RNVVDVKKVR EIGFIVYAIG RPLDPWLKDM PSVVA

Best Arabidopsis Sequence Match ( AT1G26570.1 )
(BLAST)

001: MVKICCIGAG YVGGPTMAVM ALKCPEIEVV VVDISEPRIN AWNSDRLPIY EPGLEDVVKQ CRGKNLFFST DVEKHVFESD IVFVSVNTPT KTQGLGAGKA
101: ADLTYWESAA RMIADVSKSS KIVVEKSTVP VRTAEAIEKI LTHNSKGIEF QILSNPEFLA EGTAIKDLYN PDRVLIGGRD TAAGQKAIKA LRDVYAHWVP
201: VEQIICTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVAHA VGTDTRIGPK FLNASVGFGG SCFQKDILNL IYICECNGLP EAANYWKQVV
301: KVNDYQKIRF ANRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC NRLVADKAKL SIYDPQVLEE QIRRDLSMAR FDWDHPVPLQ QIKAEGISEQ
401: VNVVSDAYEA TKDAHGLCVL TEWDEFKSLD FKKIFDNMQK PAFVFDGRNV VDAVKLREIG FIVYSIGKPL DSWLKDMPAV A

Arabidopsis Description

UGD1UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178WCI2]
SUBAcon: [extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.