CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024708.1-P	Field mustard	cytosol, extracellular	99.58	99.58
AT1G26570.1	Thale cress	cytosol, extracellular	93.56	93.56
VIT_01s0011g00690.t01	Wine grape	cytosol, extracellular	85.45	85.62
CDX74475	Canola	extracellular	44.91	83.72
KRH70872	Soybean	endoplasmic reticulum	82.74	82.92
GSMUA_Achr4P03270_001	Banana	cytosol	64.86	82.76
KRH75016	Soybean	endoplasmic reticulum	82.54	82.71
GSMUA_Achr3P30310_001	Banana	cytosol	64.86	82.32
GSMUA_Achr4P14320_001	Banana	cytosol	70.06	82.2
Zm00001d034072_P001	Maize	extracellular	81.91	82.08
Os12t0443600-01	Rice	extracellular	81.7	81.88
TraesCS5D01G404300.1	Wheat	golgi	81.7	81.88
Os03t0757900-01	Rice	plasma membrane	81.5	81.67
TraesCS5B01G399800.1	Wheat	unclear	81.5	81.67
GSMUA_Achr4P07270_001	Banana	extracellular, golgi	63.83	81.65
CDX67427	Canola	cytosol, vacuole	81.29	81.46
KXG37519	Sorghum	cytosol, extracellular	81.29	81.46
TraesCS5A01G394900.1	Wheat	extracellular, golgi	81.29	81.46
HORVU5Hr1G096370.1	Barley	extracellular, golgi	81.08	81.25
TraesCS4A01G264600.1	Wheat	extracellular	81.08	81.25
Os12t0443500-01	Rice	plasma membrane	81.08	81.25
TraesCS4D01G050600.2	Wheat	extracellular	81.08	81.25
CDY26425	Canola	extracellular, golgi	81.08	81.25
CDY37001	Canola	cytosol, vacuole	81.08	81.25
Zm00001d013245_P001	Maize	plasma membrane	81.08	81.25
GSMUA_Achr3P18750_001	Banana	extracellular, golgi	60.71	81.11
GSMUA_Achr6P11090_001	Banana	cytosol	62.16	81.03
TraesCS4B01G050400.1	Wheat	extracellular	80.46	80.62
HORVU4Hr1G008270.1	Barley	extracellular, golgi	80.46	80.62
GSMUA_Achr10P...	Banana	cytosol	62.99	80.59
EER95293	Sorghum	extracellular, vacuole	80.25	80.42
TraesCS4B01G116200.1	Wheat	extracellular, golgi	79.83	80.0
TraesCS4A01G199200.1	Wheat	extracellular, golgi	79.83	80.0
HORVU4Hr1G021270.1	Barley	extracellular, golgi	79.83	80.0
TraesCS4D01G113800.1	Wheat	extracellular, golgi	79.63	79.79
Os03t0425600-00	Rice	plasma membrane	79.42	79.42
GSMUA_Achr11P...	Banana	cytosol	63.41	79.22
CDX69521	Canola	cytosol	60.5	78.86
GSMUA_Achr6P23920_001	Banana	cytosol	53.22	78.29
Zm00001d033188_P001	Maize	extracellular	77.75	77.75
TraesCS4B01G077100.1	Wheat	cytosol, vacuole	76.92	77.08
TraesCS4D01G075600.1	Wheat	cytosol, vacuole	76.92	76.92
GSMUA_Achr7P26580_001	Banana	cytosol	20.79	76.92
TraesCS4A01G237900.1	Wheat	cytosol, vacuole	76.3	76.3
Os03t0604200-01	Rice	plasma membrane	76.3	76.14
CDX86369	Canola	cytosol	14.55	76.09
KXG38049	Sorghum	endoplasmic reticulum, extracellular	77.34	74.55
KRG89491	Soybean	cytosol	43.45	70.85
CDX70614	Canola	cytosol, mitochondrion, peroxisome, plastid	81.5	70.13
CDX90989	Canola	cytosol, golgi	79.63	69.89
CDX78633	Canola	cytosol	81.5	69.26
CDX85549	Canola	cytosol	79.42	56.93
CDX85269	Canola	cytosol	25.99	56.82
CDY15951	Canola	extracellular	7.28	48.61
Os04t0581600-01	Rice	cytosol, mitochondrion, peroxisome	20.58	45.21
GSMUA_Achr4P10820_001	Banana	plasma membrane	60.71	39.3
Os03t0147150-00	Rice	plasma membrane	18.5	36.48

Protein Annotations

KEGG:00040+1.1.1.22	KEGG:00053+1.1.1.22	KEGG:00500+1.1.1.22	KEGG:00520+1.1.1.22	Gene3D:1.20.5.100	MapMan:3.13.3.1
Gene3D:3.40.50.720	InterPro:6-PGluconate_DH-like_C_sf	GO:A0A078FSV8	UniProt:A0A078FSV8	EnsemblPlants:CDY16166	ProteinID:CDY16166
ProteinID:CDY16166.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003979	GO:GO:0005488
GO:GO:0006065	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00090607001	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00984	PFAM:PF03720	PFAM:PF03721	PIRSF:PIRSF000124	PIRSF:PIRSF500133	PANTHER:PTHR11374
PANTHER:PTHR11374:SF30	MetaCyc:PWY-7346	SMART:SM00984	SUPFAM:SSF48179	SUPFAM:SSF51735	SUPFAM:SSF52413
TIGRFAMs:TIGR03026	InterPro:UDP-Glc/GDP-Man	InterPro:UDP-Glc/GDP-Man_DH_C	InterPro:UDP-Glc/GDP-Man_DH_C_sf	InterPro:UDP-Glc/GDP-Man_DH_N	InterPro:UDP-Glc/GDP-Man_DH_dimer
InterPro:UDPglc_DH_euk	UniPathway:UPA00038	UniParc:UPI0004EF072F	SEG:seg	:	:

Description

BnaA09g29000DUDP-glucose 6-dehydrogenase 1 [Source:Projected from Arabidopsis thaliana (AT1G26570) UniProtKB/Swiss-Prot;Acc:Q9FZE1]

Coordinates

chrLK032061:+:270792..272237

Molecular Weight (calculated)

53004.7 Da

IEP (calculated)

6.033

GRAVY (calculated)

-0.035

Length

481 amino acids

Sequence
(BLAST)

001: MVKICCIGAG YVGGPTMAVM ALKCPEIEVS VVDISEPRIN AWNSDKLPIY EPGLDDVVKQ CRGRNLFFST DVERHVFESD IVFVSVNTPT KTQGLGAGKA
101: ADLTYWESAA RMIADVSKSS KIVVEKSTVP VRTAEAIEKI LTHNSKGIEF QILSNPEFLA EGTAVKDLYN PDRVLIGGRG NAAGEKAVQA LRDVYAHWVP
201: VERIICTNLW SAELSKLAAN AFLAQRISSI NAMSALCEAT GADVTQVAHA VGTDTRIGPK FLNASVGFGG SCFQKDILNL IYICECNGLP EAANYWKQVI
301: KVNDYQKTRF ANRVVSSMFN TVSGKKVAIL GFAFKKDTGD TRETPAIDVC NRLVADKAKL SIYDPQALEE QIRKDLFMAR FDWDHPVSLQ QIKAEGMLEQ
401: VSVVSDAYEA TKDAHGICVL TEWDEFKSLD FERIFESMRK PAFVFDGRNV VDAVKLREIG FIVYSIGKPL DSWLKNMPSV A

Best Arabidopsis Sequence Match ( AT1G26570.1 )
(BLAST)

001: MVKICCIGAG YVGGPTMAVM ALKCPEIEVV VVDISEPRIN AWNSDRLPIY EPGLEDVVKQ CRGKNLFFST DVEKHVFESD IVFVSVNTPT KTQGLGAGKA
101: ADLTYWESAA RMIADVSKSS KIVVEKSTVP VRTAEAIEKI LTHNSKGIEF QILSNPEFLA EGTAIKDLYN PDRVLIGGRD TAAGQKAIKA LRDVYAHWVP
201: VEQIICTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVAHA VGTDTRIGPK FLNASVGFGG SCFQKDILNL IYICECNGLP EAANYWKQVV
301: KVNDYQKIRF ANRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC NRLVADKAKL SIYDPQVLEE QIRRDLSMAR FDWDHPVPLQ QIKAEGISEQ
401: VNVVSDAYEA TKDAHGLCVL TEWDEFKSLD FKKIFDNMQK PAFVFDGRNV VDAVKLREIG FIVYSIGKPL DSWLKDMPAV A

Arabidopsis Description

UGD1UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178WCI2]
SUBAcon: [extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.