Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G01010.1 | Thale cress | cytosol | 75.38 | 62.03 |
| GSMUA_Achr6P23920_001 | Banana | cytosol | 91.54 | 36.39 |
| GSMUA_Achr3P30310_001 | Banana | cytosol | 91.54 | 31.4 |
| GSMUA_Achr4P07270_001 | Banana | extracellular, golgi | 90.77 | 31.38 |
| GSMUA_Achr4P03270_001 | Banana | cytosol | 90.0 | 31.03 |
| GSMUA_Achr6P11090_001 | Banana | cytosol | 86.92 | 30.62 |
| CDX69521 | Canola | cytosol | 85.38 | 30.08 |
| GSMUA_Achr10P... | Banana | cytosol | 85.38 | 29.52 |
| GSMUA_Achr3P18750_001 | Banana | extracellular, golgi | 81.54 | 29.44 |
| PGSC0003DMT400069038 | Potato | cytosol | 39.23 | 28.02 |
| KRH15845 | Soybean | cytosol | 70.0 | 27.49 |
| KRG89491 | Soybean | cytosol | 61.54 | 27.12 |
| GSMUA_Achr4P14320_001 | Banana | cytosol | 84.62 | 26.83 |
| GSMUA_Achr11P... | Banana | cytosol | 72.31 | 24.42 |
| EER95293 | Sorghum | extracellular, vacuole | 86.92 | 23.54 |
| CDY26425 | Canola | extracellular, golgi | 86.15 | 23.33 |
| HORVU4Hr1G021270.1 | Barley | extracellular, golgi | 86.15 | 23.33 |
| Bra008695.1-P | Field mustard | extracellular, golgi | 86.15 | 23.33 |
| TraesCS4A01G199200.1 | Wheat | extracellular, golgi | 86.15 | 23.33 |
| TraesCS4B01G116200.1 | Wheat | extracellular, golgi | 86.15 | 23.33 |
| TraesCS4D01G113800.1 | Wheat | extracellular, golgi | 85.38 | 23.12 |
| Os03t0425600-00 | Rice | plasma membrane | 85.38 | 23.08 |
| PGSC0003DMT400064713 | Potato | cytosol | 82.31 | 23.06 |
| Bra006303.1-P | Field mustard | extracellular, vacuole | 84.62 | 22.92 |
| AT5G15490.1 | Thale cress | extracellular, vacuole | 83.85 | 22.71 |
| KRH70872 | Soybean | endoplasmic reticulum | 83.85 | 22.71 |
| KRH44990 | Soybean | nucleus | 83.85 | 22.71 |
| AT5G39320.1 | Thale cress | extracellular | 83.85 | 22.71 |
| KRH75016 | Soybean | endoplasmic reticulum | 83.08 | 22.5 |
| CDX67427 | Canola | cytosol, vacuole | 83.08 | 22.5 |
| CDY37001 | Canola | cytosol, vacuole | 83.08 | 22.5 |
| Bra028430.1-P | Field mustard | cytosol, vacuole | 83.08 | 22.5 |
| KRH01262 | Soybean | nucleus | 82.31 | 22.29 |
| KRG93627 | Soybean | endoplasmic reticulum | 82.31 | 22.29 |
| Bra028234.1-P | Field mustard | extracellular, vacuole | 82.31 | 22.29 |
| AT3G29360.1 | Thale cress | cytosol, vacuole | 82.31 | 22.29 |
| Solyc06g069550.1.1 | Tomato | extracellular | 81.54 | 22.08 |
| KRH18404 | Soybean | endoplasmic reticulum | 81.54 | 22.08 |
| PGSC0003DMT400087395 | Potato | cytosol, golgi | 81.54 | 22.08 |
| AT1G26570.1 | Thale cress | cytosol, extracellular | 81.54 | 22.04 |
| PGSC0003DMT400083187 | Potato | extracellular | 80.0 | 21.67 |
| Solyc03g115380.1.1 | Tomato | nucleus, unclear | 80.0 | 21.67 |
| PGSC0003DMT400003666 | Potato | extracellular, vacuole | 80.0 | 21.62 |
| Solyc02g067080.2.1 | Tomato | extracellular | 82.31 | 21.02 |
| Bra024708.1-P | Field mustard | cytosol, extracellular | 76.92 | 20.79 |
| CDY16166 | Canola | cytosol | 76.92 | 20.79 |
| CDX70614 | Canola | cytosol, mitochondrion, peroxisome, plastid | 85.38 | 19.86 |
| KRH56847 | Soybean | cytosol | 72.31 | 19.67 |
| CDX78633 | Canola | cytosol | 85.38 | 19.61 |
| KRH03109 | Soybean | cytosol | 71.54 | 19.42 |
| CDX90989 | Canola | cytosol, golgi | 78.46 | 18.61 |
| Bra023520.1-P | Field mustard | golgi | 79.23 | 16.59 |
| CDX85549 | Canola | cytosol | 79.23 | 15.35 |
| GSMUA_Achr4P10820_001 | Banana | plasma membrane | 87.69 | 15.34 |
| Bra025395.1-P | Field mustard | cytosol | 10.77 | 14.74 |
| Solyc03g065350.1.1 | Tomato | cytosol, extracellular, peroxisome | 31.54 | 14.59 |
| CDX85269 | Canola | cytosol | 23.08 | 13.64 |
| CDX86369 | Canola | cytosol | 9.23 | 13.04 |
| CDX74475 | Canola | extracellular | 5.38 | 2.71 |
| Bra030352.1-P | Field mustard | extracellular | 0.77 | 1.39 |
| CDY15951 | Canola | extracellular | 0.77 | 1.39 |
| Solyc02g088690.2.1 | Tomato | nucleus | 1.54 | 0.63 |
| Bra026264.1-P | Field mustard | extracellular, vacuole | 0.77 | 0.4 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016616 | GO:GO:0051287 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr7G26580_001 |
| EnsemblPlants:GSMUA_Achr7P26580_001 | EnsemblPlants:GSMUA_Achr7T26580_001 | UniProt:M0TKZ4 | PFAM:PF03720 | PANTHER:PTHR11374 | PANTHER:PTHR11374:SF30 |
| SMART:SM00984 | SUPFAM:SSF52413 | InterPro:UDP-Glc/GDP-Man_DH_C | InterPro:UDP-Glc/GDP-Man_DH_C_sf | UniParc:UPI00029521FD | : |
Description
UDP-glucose 6-dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr7G26580_001]
Coordinates
chr7:+:27837827..27838318
Molecular Weight (calculated)
14604.7 Da
IEP (calculated)
7.253
GRAVY (calculated)
-0.140
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MFNTVSGKKI AVLGFAFKKD TGDTRETPAI DVCKGLLGDK AKISIYDPQV TVTWDAYEAT KGAHGVCILT EWDEFRKLDY AKIFQNMQKP AFIFDGRNVV
101: DPEKLREIGF IVYSIGKPLD PWLKDMPAVV
101: DPEKLREIGF IVYSIGKPLD PWLKDMPAVV
001: MVKICCIGAG YVGGPTMAVM ALKCPEIEVV VVDISEPRIN AWNSDRLPIY EPGLEDVVKQ CRGKNLFFST DVEKHVFESD IVFVSVNTPT KTQGLGAGKA
101: ADLTYWESAA RMIADVSKSS KIVVEKSTVP VRTAEAIEKI LTHNSKGIEF QILSNPEFLA EGTAIKDLYN PDRVLIGGRD TAAGQKAIKA LRDVYAHWVP
201: VEQIICTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVAHA VGTDTRIGPK FLNASVGFGG SCFQKDILNL IYICECNGLP EAANYWKQVV
301: KVNDYQKIRF ANRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC NRLVADKAKL SIYDPQVLEE QIRRDLSMAR FDWDHPVPLQ QIKAEGISEQ
401: VNVVSDAYEA TKDAHGLCVL TEWDEFKSLD FKKIFDNMQK PAFVFDGRNV VDAVKLREIG FIVYSIGKPL DSWLKDMPAV A
101: ADLTYWESAA RMIADVSKSS KIVVEKSTVP VRTAEAIEKI LTHNSKGIEF QILSNPEFLA EGTAIKDLYN PDRVLIGGRD TAAGQKAIKA LRDVYAHWVP
201: VEQIICTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVAHA VGTDTRIGPK FLNASVGFGG SCFQKDILNL IYICECNGLP EAANYWKQVV
301: KVNDYQKIRF ANRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC NRLVADKAKL SIYDPQVLEE QIRRDLSMAR FDWDHPVPLQ QIKAEGISEQ
401: VNVVSDAYEA TKDAHGLCVL TEWDEFKSLD FKKIFDNMQK PAFVFDGRNV VDAVKLREIG FIVYSIGKPL DSWLKDMPAV A
Arabidopsis Description
UGD1UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178WCI2]
SUBAcon: [extracellular,cytosol]
SUBAcon: [extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.