CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

cytosol 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26425	Canola	extracellular, golgi	84.85	96.88
CDX69521	Canola	cytosol	64.6	95.94
AT5G15490.1	Thale cress	extracellular, vacuole	83.03	94.79
Solyc02g088690.2.1	Tomato	nucleus	52.92	91.77
CDX74475	Canola	extracellular	42.52	90.31
PGSC0003DMT400064713	Potato	cytosol	74.64	88.15
Zm00001d034072_P001	Maize	extracellular	77.19	88.12
TraesCS5D01G404300.1	Wheat	golgi	77.19	88.12
KXG37519	Sorghum	cytosol, extracellular	77.19	88.12
AT3G01010.1	Thale cress	cytosol	25.36	87.97
KRH44990	Soybean	nucleus	77.01	87.92
TraesCS5B01G399800.1	Wheat	unclear	77.01	87.92
KRH01262	Soybean	nucleus	76.82	87.71
TraesCS5A01G394900.1	Wheat	extracellular, golgi	76.82	87.71
PGSC0003DMT400003666	Potato	extracellular, vacuole	76.82	87.53
EER95293	Sorghum	extracellular, vacuole	76.64	87.5
HORVU5Hr1G096370.1	Barley	extracellular, golgi	76.64	87.5
CDX67427	Canola	cytosol, vacuole	76.46	87.29
CDY37001	Canola	cytosol, vacuole	76.46	87.29
KRH18404	Soybean	endoplasmic reticulum	76.46	87.29
TraesCS4D01G050600.2	Wheat	extracellular	76.28	87.08
Zm00001d013245_P001	Maize	plasma membrane	76.28	87.08
GSMUA_Achr4P14320_001	Banana	cytosol	65.15	87.07
Os12t0443500-01	Rice	plasma membrane	76.09	86.88
HORVU4Hr1G008270.1	Barley	extracellular, golgi	76.09	86.88
Os03t0757900-01	Rice	plasma membrane	75.91	86.67
GSMUA_Achr4P03270_001	Banana	cytosol	59.49	86.47
Os12t0443600-01	Rice	extracellular	75.73	86.46
TraesCS4A01G199200.1	Wheat	extracellular, golgi	75.73	86.46
TraesCS4B01G050400.1	Wheat	extracellular	75.73	86.46
TraesCS4B01G116200.1	Wheat	extracellular, golgi	75.73	86.46
KRG93627	Soybean	endoplasmic reticulum	75.73	86.46
HORVU4Hr1G021270.1	Barley	extracellular, golgi	75.73	86.46
TraesCS4A01G264600.1	Wheat	extracellular	75.55	86.25
TraesCS4D01G113800.1	Wheat	extracellular, golgi	75.55	86.25
GSMUA_Achr4P07270_001	Banana	extracellular, golgi	58.94	85.9
GSMUA_Achr10P...	Banana	cytosol	58.76	85.64
GSMUA_Achr3P30310_001	Banana	cytosol	59.12	85.49
GSMUA_Achr6P11090_001	Banana	cytosol	57.3	85.09
GSMUA_Achr11P...	Banana	cytosol	59.67	84.94
PGSC0003DMT400069038	Potato	cytosol	28.1	84.62
Os03t0425600-00	Rice	plasma membrane	73.72	83.99
Solyc02g067080.2.1	Tomato	extracellular	77.74	83.69
GSMUA_Achr3P18750_001	Banana	extracellular, golgi	54.38	82.78
CDX70614	Canola	cytosol, mitochondrion, peroxisome, plastid	84.12	82.47
GSMUA_Achr6P23920_001	Banana	cytosol	49.09	82.26
CDX78633	Canola	cytosol	84.31	81.63
Os03t0604200-01	Rice	plasma membrane	71.17	80.91
TraesCS4B01G077100.1	Wheat	cytosol, vacuole	70.26	80.21
TraesCS4D01G075600.1	Wheat	cytosol, vacuole	70.07	79.83
CDY16166	Canola	cytosol	69.89	79.63
TraesCS4A01G237900.1	Wheat	cytosol, vacuole	69.53	79.21
Zm00001d033188_P001	Maize	extracellular	69.34	79.0
GSMUA_Achr7P26580_001	Banana	cytosol	18.61	78.46
KXG38049	Sorghum	endoplasmic reticulum, extracellular	68.98	75.75
CDX85549	Canola	cytosol	92.15	75.26
Solyc03g065350.1.1	Tomato	cytosol, extracellular, peroxisome	37.41	72.95
CDX86369	Canola	cytosol	12.23	72.83
CDX85269	Canola	cytosol	26.64	66.36
CDY15951	Canola	extracellular	6.75	51.39
Os04t0581600-01	Rice	cytosol, mitochondrion, peroxisome	18.07	45.21
GSMUA_Achr4P10820_001	Banana	plasma membrane	57.3	42.26
Os03t0147150-00	Rice	plasma membrane	15.69	35.25

Protein Annotations

KEGG:00040+1.1.1.22	KEGG:00053+1.1.1.22	KEGG:00500+1.1.1.22	KEGG:00520+1.1.1.22	Gene3D:1.20.5.100	MapMan:3.13.3.1
Gene3D:3.40.50.720	InterPro:6-PGluconate_DH-like_C_sf	GO:A0A078DR97	EnsemblPlants:CDX90989	ProteinID:CDX90989	ProteinID:CDX90989.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00151748001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00984
PFAM:PF03720	PFAM:PF03721	PANTHER:PTHR11374	PANTHER:PTHR11374:SF30	MetaCyc:PWY-7346	SMART:SM00984
SUPFAM:SSF48179	SUPFAM:SSF51735	SUPFAM:SSF52413	TIGRFAMs:TIGR03026	InterPro:UDP-Glc/GDP-Man	InterPro:UDP-Glc/GDP-Man_DH_C
InterPro:UDP-Glc/GDP-Man_DH_C_sf	InterPro:UDP-Glc/GDP-Man_DH_N	InterPro:UDP-Glc/GDP-Man_DH_dimer	UniPathway:UPA00038	UniParc:UPI0004EE51B7	:

Description

BnaC02g06080D

Coordinates

chrLK031865:+:174448..177593

Molecular Weight (calculated)

60914.1 Da

IEP (calculated)

6.340

GRAVY (calculated)

-0.145

Length

548 amino acids

Sequence
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPSVEVA VVDISVPRIT AWNSDQLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFK PDRVLIGGRE TPEGFAAVKA LKDIYSQWVP
201: EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVTEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLIGDKARI SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV
401: SVAWDAYAAT KDAHGICILT EWDEFKKLDY EKIFENMQKP AFVFDGRNVV DAEKLRKIGF IVYSIVDGVK LAGEAMDAVH ERASGFLRHK KLRKDAEIEF
501: GFVSIDQKLG EERLVDAKHR TNQLFSWETR INSISRNEEE PVNLNLGF

Best Arabidopsis Sequence Match ( AT5G15490.1 )
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPSVEVA VVDISVPRIN AWNSDQLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFM PDRVLIGGRE TTEGFAAVKA LKDIYAQWVP
201: EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVSEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKARL SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV
401: SVAWDAYTAT KDAHGICILT EWDEFKKLDF QRIFENMQKP AFVFDGRNVV DADKLREIGF IVYSIGKPLD QWLKDMPALA

Arabidopsis Description

UGD3UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UJW9]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.