Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 6
- plasma membrane 5
- endoplasmic reticulum 5
- vacuole 6
- peroxisome 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G39320.1 | EER95293 | AT1G26570.1 | 21798944 |
| AT5G39320.1 | KXG37519 | AT1G26570.1 | 21798944 |
| AT5G39320.1 | KXG38049 | AT1G26570.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P14320_001 | Banana | cytosol | 80.21 | 93.9 |
| GSMUA_Achr4P03270_001 | Banana | cytosol | 73.12 | 93.1 |
| KXG37519 | Sorghum | cytosol, extracellular | 92.29 | 92.29 |
| TraesCS4A01G199200.1 | Wheat | extracellular, golgi | 92.08 | 92.08 |
| HORVU4Hr1G021270.1 | Barley | extracellular, golgi | 92.08 | 92.08 |
| TraesCS4D01G113800.1 | Wheat | extracellular, golgi | 91.88 | 91.88 |
| TraesCS4B01G116200.1 | Wheat | extracellular, golgi | 91.88 | 91.88 |
| Solyc02g088690.2.1 | Tomato | nucleus | 60.42 | 91.77 |
| GSMUA_Achr3P30310_001 | Banana | cytosol | 71.67 | 90.77 |
| GSMUA_Achr6P11090_001 | Banana | cytosol | 69.58 | 90.51 |
| GSMUA_Achr4P07270_001 | Banana | extracellular, golgi | 70.83 | 90.43 |
| CDY26425 | Canola | extracellular, golgi | 90.21 | 90.21 |
| Bra008695.1-P | Field mustard | extracellular, golgi | 90.0 | 90.0 |
| GSMUA_Achr11P... | Banana | cytosol | 72.08 | 89.87 |
| CDX69521 | Canola | cytosol | 68.96 | 89.7 |
| GSMUA_Achr10P... | Banana | cytosol | 70.21 | 89.63 |
| Bra006303.1-P | Field mustard | extracellular, vacuole | 89.38 | 89.38 |
| GSMUA_Achr3P18750_001 | Banana | extracellular, golgi | 66.88 | 89.17 |
| PGSC0003DMT400064713 | Potato | cytosol | 86.04 | 89.01 |
| AT5G15490.1 | Thale cress | extracellular, vacuole | 88.96 | 88.96 |
| PGSC0003DMT400003666 | Potato | extracellular, vacuole | 88.96 | 88.77 |
| GSMUA_Achr6P23920_001 | Banana | cytosol | 60.21 | 88.38 |
| KRH44990 | Soybean | nucleus | 88.33 | 88.33 |
| KRH01262 | Soybean | nucleus | 88.12 | 88.12 |
| KRH18404 | Soybean | endoplasmic reticulum | 87.71 | 87.71 |
| KRH70872 | Soybean | endoplasmic reticulum | 87.71 | 87.71 |
| KRH75016 | Soybean | endoplasmic reticulum | 87.5 | 87.5 |
| KRG93627 | Soybean | endoplasmic reticulum | 87.5 | 87.5 |
| AT3G29360.1 | Thale cress | cytosol, vacuole | 87.08 | 87.08 |
| Bra026264.1-P | Field mustard | extracellular, vacuole | 44.79 | 87.04 |
| GSMUA_Achr7P26580_001 | Banana | cytosol | 23.54 | 86.92 |
| Os03t0425600-00 | Rice | plasma membrane | 87.08 | 86.9 |
| PGSC0003DMT400087395 | Potato | cytosol, golgi | 86.46 | 86.46 |
| CDX74475 | Canola | extracellular | 46.46 | 86.43 |
| Bra028430.1-P | Field mustard | cytosol, vacuole | 86.25 | 86.25 |
| CDY37001 | Canola | cytosol, vacuole | 86.25 | 86.25 |
| CDX67427 | Canola | cytosol, vacuole | 86.25 | 86.25 |
| AT5G39320.1 | Thale cress | extracellular | 86.04 | 86.04 |
| Solyc03g115380.1.1 | Tomato | nucleus, unclear | 85.83 | 85.83 |
| Bra028234.1-P | Field mustard | extracellular, vacuole | 85.62 | 85.62 |
| PGSC0003DMT400083187 | Potato | extracellular | 84.79 | 84.79 |
| Solyc06g069550.1.1 | Tomato | extracellular | 84.58 | 84.58 |
| Solyc02g067080.2.1 | Tomato | extracellular | 89.38 | 84.28 |
| PGSC0003DMT400069038 | Potato | cytosol | 31.88 | 84.07 |
| AT1G26570.1 | Thale cress | cytosol, extracellular | 81.88 | 81.7 |
| AT3G01010.1 | Thale cress | cytosol | 26.88 | 81.65 |
| Bra024708.1-P | Field mustard | cytosol, extracellular | 80.83 | 80.67 |
| CDY16166 | Canola | cytosol | 80.42 | 80.25 |
| KXG38049 | Sorghum | endoplasmic reticulum, extracellular | 81.88 | 78.76 |
| Bra025395.1-P | Field mustard | cytosol | 15.42 | 77.89 |
| KRG89491 | Soybean | cytosol | 47.71 | 77.63 |
| KRH03109 | Soybean | cytosol | 77.08 | 77.24 |
| CDX86369 | Canola | cytosol | 14.79 | 77.17 |
| CDX70614 | Canola | cytosol, mitochondrion, peroxisome, plastid | 89.38 | 76.74 |
| CDX90989 | Canola | cytosol, golgi | 87.5 | 76.64 |
| KRH56847 | Soybean | cytosol | 76.25 | 76.57 |
| CDX78633 | Canola | cytosol | 89.58 | 75.97 |
| KRH15845 | Soybean | cytosol | 51.46 | 74.62 |
| Solyc03g065350.1.1 | Tomato | cytosol, extracellular, peroxisome | 41.88 | 71.53 |
| Bra023520.1-P | Field mustard | golgi | 87.5 | 67.63 |
| CDX85269 | Canola | cytosol | 30.42 | 66.36 |
| CDX85549 | Canola | cytosol | 87.71 | 62.74 |
| CDY15951 | Canola | extracellular | 7.5 | 50.0 |
| Bra030352.1-P | Field mustard | extracellular | 7.5 | 50.0 |
| GSMUA_Achr4P10820_001 | Banana | plasma membrane | 68.54 | 44.28 |
Protein Annotations
| KEGG:00040+1.1.1.22 | KEGG:00053+1.1.1.22 | KEGG:00520+1.1.1.22 | Gene3D:1.20.5.100 | MapMan:3.13.3.1 | Gene3D:3.40.50.720 |
| InterPro:6-PGluconate_DH-like_C_sf | EntrezGene:8054209 | UniProt:C5WTM9 | EnsemblPlants:EER95293 | ProteinID:EER95293 | ProteinID:EER95293.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003979 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006024 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016491 | GO:GO:0016616 | GO:GO:0051287 |
| GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00984 | PFAM:PF03720 | PFAM:PF03721 | PIRSF:PIRSF000124 |
| PIRSF:PIRSF500133 | PANTHER:PTHR11374 | PANTHER:PTHR11374:SF30 | MetaCyc:PWY-7346 | MetaCyc:PWY-7820 | SMART:SM00984 |
| EnsemblPlantsGene:SORBI_3001G459800 | SUPFAM:SSF48179 | SUPFAM:SSF51735 | SUPFAM:SSF52413 | unigene:Sbi.4085 | TIGRFAMs:TIGR03026 |
| InterPro:UDP-Glc/GDP-Man | InterPro:UDP-Glc/GDP-Man_DH_C | InterPro:UDP-Glc/GDP-Man_DH_C_sf | InterPro:UDP-Glc/GDP-Man_DH_N | InterPro:UDP-Glc/GDP-Man_DH_dimer | InterPro:UDPglc_DH_euk |
| UniParc:UPI0001A8345A | RefSeq:XP_002468295.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:73534067..73537450
Molecular Weight (calculated)
52759.6 Da
IEP (calculated)
6.379
GRAVY (calculated)
-0.045
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKICCLGAG YVGGPTMAVI ALKCPAIEVC VVDISVPRIA AWNSDQLPIY EPGLDDVVKQ CRGRNLFFSN DIEKHVAEAD IIFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVAKSD KIVVEKSTVP VKTAEAIEKI LTHNSKGINF QILSNPEFLA EGTAIEDLFK PDRVLIGGRE TPEGQKAVKA LKDVYANWVP
201: EDRILTTNLW SAELSKLAAN AFLAQRISSV NAISALCEAT GANVAEVAYA VGKDSRIGPR FLNASVGFGG SCFQKDILNL VYICECNGLP EVANYWKQVI
301: KINDYQKSRF VNRVVSSMFN TVSGKKIAVL GFAFKKDTGD TRETAAIDVC KGLLGDKAKI SIYDPQVTED QIQRDLAMNK FDWDHPIHLQ PMSPTAVKQV
401: SVTWDPYEAT KGAHGICILT EWDEFKALDY KKIYDSMQKP AFLFDGRNVI DAEKMREIGF IVYSIGKPLD PWLKDMPAVA
101: ADLTYWESAA RMIADVAKSD KIVVEKSTVP VKTAEAIEKI LTHNSKGINF QILSNPEFLA EGTAIEDLFK PDRVLIGGRE TPEGQKAVKA LKDVYANWVP
201: EDRILTTNLW SAELSKLAAN AFLAQRISSV NAISALCEAT GANVAEVAYA VGKDSRIGPR FLNASVGFGG SCFQKDILNL VYICECNGLP EVANYWKQVI
301: KINDYQKSRF VNRVVSSMFN TVSGKKIAVL GFAFKKDTGD TRETAAIDVC KGLLGDKAKI SIYDPQVTED QIQRDLAMNK FDWDHPIHLQ PMSPTAVKQV
401: SVTWDPYEAT KGAHGICILT EWDEFKALDY KKIYDSMQKP AFLFDGRNVI DAEKMREIGF IVYSIGKPLD PWLKDMPAVA
001: MVKICCIGAG YVGGPTMAVI ALKCPSVEVA VVDISVPRIN AWNSDQLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFM PDRVLIGGRE TTEGFAAVKA LKDIYAQWVP
201: EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVSEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKARL SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV
401: SVAWDAYTAT KDAHGICILT EWDEFKKLDF QRIFENMQKP AFVFDGRNVV DADKLREIGF IVYSIGKPLD QWLKDMPALA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFM PDRVLIGGRE TTEGFAAVKA LKDIYAQWVP
201: EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVSEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKARL SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV
401: SVAWDAYTAT KDAHGICILT EWDEFKKLDF QRIFENMQKP AFVFDGRNVV DADKLREIGF IVYSIGKPLD QWLKDMPALA
Arabidopsis Description
UGD3UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UJW9]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.