Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028430.1-P | Field mustard | cytosol, vacuole | 97.71 | 97.71 |
| CDX67427 | Canola | cytosol, vacuole | 97.71 | 97.71 |
| Bra028234.1-P | Field mustard | extracellular, vacuole | 97.5 | 97.5 |
| CDY37001 | Canola | cytosol, vacuole | 97.29 | 97.29 |
| Bra026264.1-P | Field mustard | extracellular, vacuole | 50.0 | 97.17 |
| CDX74475 | Canola | extracellular | 52.08 | 96.9 |
| AT3G29360.1 | Thale cress | cytosol, vacuole | 92.71 | 92.71 |
| Solyc02g088690.2.1 | Tomato | nucleus | 59.38 | 90.19 |
| KRH44990 | Soybean | nucleus | 90.0 | 90.0 |
| KRH01262 | Soybean | nucleus | 89.38 | 89.38 |
| KRG93627 | Soybean | endoplasmic reticulum | 89.17 | 89.17 |
| AT5G15490.1 | Thale cress | extracellular, vacuole | 89.17 | 89.17 |
| PGSC0003DMT400003666 | Potato | extracellular, vacuole | 89.17 | 88.98 |
| KRH18404 | Soybean | endoplasmic reticulum | 88.96 | 88.96 |
| PGSC0003DMT400064713 | Potato | cytosol | 85.62 | 88.58 |
| HORVU4Hr1G008270.1 | Barley | extracellular, golgi | 87.71 | 87.71 |
| HORVU5Hr1G096370.1 | Barley | extracellular, golgi | 87.29 | 87.29 |
| TraesCS5D01G404300.1 | Wheat | golgi | 87.29 | 87.29 |
| KXG37519 | Sorghum | cytosol, extracellular | 87.29 | 87.29 |
| Zm00001d034072_P001 | Maize | extracellular | 87.29 | 87.29 |
| TraesCS4B01G050400.1 | Wheat | extracellular | 87.08 | 87.08 |
| TraesCS4D01G050600.2 | Wheat | extracellular | 87.08 | 87.08 |
| TraesCS5B01G399800.1 | Wheat | unclear | 87.08 | 87.08 |
| TraesCS5A01G394900.1 | Wheat | extracellular, golgi | 87.08 | 87.08 |
| GSMUA_Achr4P03270_001 | Banana | cytosol | 68.33 | 87.0 |
| TraesCS4A01G199200.1 | Wheat | extracellular, golgi | 86.88 | 86.88 |
| TraesCS4A01G264600.1 | Wheat | extracellular | 86.88 | 86.88 |
| HORVU4Hr1G021270.1 | Barley | extracellular, golgi | 86.88 | 86.88 |
| Zm00001d013245_P001 | Maize | plasma membrane | 86.88 | 86.88 |
| TraesCS4D01G113800.1 | Wheat | extracellular, golgi | 86.67 | 86.67 |
| Os12t0443500-01 | Rice | plasma membrane | 86.67 | 86.67 |
| TraesCS4B01G116200.1 | Wheat | extracellular, golgi | 86.67 | 86.67 |
| GSMUA_Achr4P14320_001 | Banana | cytosol | 73.96 | 86.59 |
| GSMUA_Achr3P30310_001 | Banana | cytosol | 68.33 | 86.54 |
| Os03t0757900-01 | Rice | plasma membrane | 86.46 | 86.46 |
| Os12t0443600-01 | Rice | extracellular | 86.46 | 86.46 |
| EER95293 | Sorghum | extracellular, vacuole | 86.04 | 86.04 |
| GSMUA_Achr4P07270_001 | Banana | extracellular, golgi | 67.08 | 85.64 |
| GSMUA_Achr6P11090_001 | Banana | cytosol | 65.62 | 85.37 |
| GSMUA_Achr10P... | Banana | cytosol | 65.83 | 84.04 |
| GSMUA_Achr7P26580_001 | Banana | cytosol | 22.71 | 83.85 |
| Solyc02g067080.2.1 | Tomato | extracellular | 88.75 | 83.69 |
| PGSC0003DMT400069038 | Potato | cytosol | 31.67 | 83.52 |
| GSMUA_Achr6P23920_001 | Banana | cytosol | 56.88 | 83.49 |
| GSMUA_Achr11P... | Banana | cytosol | 66.46 | 82.86 |
| AT1G26570.1 | Thale cress | cytosol, extracellular | 82.92 | 82.74 |
| Os03t0425600-00 | Rice | plasma membrane | 82.29 | 82.12 |
| GSMUA_Achr3P18750_001 | Banana | extracellular, golgi | 61.46 | 81.94 |
| AT3G01010.1 | Thale cress | cytosol | 26.67 | 81.01 |
| Os03t0604200-01 | Rice | plasma membrane | 81.25 | 80.91 |
| TraesCS4B01G077100.1 | Wheat | cytosol, vacuole | 80.83 | 80.83 |
| TraesCS4A01G237900.1 | Wheat | cytosol, vacuole | 80.62 | 80.46 |
| TraesCS4D01G075600.1 | Wheat | cytosol, vacuole | 80.62 | 80.46 |
| Zm00001d033188_P001 | Maize | extracellular | 80.21 | 80.04 |
| KXG38049 | Sorghum | endoplasmic reticulum, extracellular | 79.79 | 76.75 |
| Solyc03g065350.1.1 | Tomato | cytosol, extracellular, peroxisome | 42.08 | 71.89 |
| Os04t0581600-01 | Rice | cytosol, mitochondrion, peroxisome | 19.58 | 42.92 |
| GSMUA_Achr4P10820_001 | Banana | plasma membrane | 66.04 | 42.66 |
| Os03t0147150-00 | Rice | plasma membrane | 17.29 | 34.02 |
Protein Annotations
| KEGG:00040+1.1.1.22 | KEGG:00053+1.1.1.22 | KEGG:00520+1.1.1.22 | Gene3D:1.20.5.100 | MapMan:3.13.3.1 | Gene3D:3.40.50.720 |
| InterPro:6-PGluconate_DH-like_C_sf | EntrezGene:833928 | UniProt:A0A178UJQ6 | ProteinID:AED94419.1 | ArrayExpress:AT5G39320 | EnsemblPlantsGene:AT5G39320 |
| RefSeq:AT5G39320 | TAIR:AT5G39320 | RefSeq:AT5G39320-TAIR-G | EnsemblPlants:AT5G39320.1 | TAIR:AT5G39320.1 | ProteinID:BAB11006.1 |
| EMBL:BT006380 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003979 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006024 | GO:GO:0006065 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016616 | GO:GO:0048046 | GO:GO:0051287 |
| GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_198748.1 | ProteinID:OAO93953.1 | PFAM:PF00984 | PFAM:PF03720 |
| PFAM:PF03721 | PIRSF:PIRSF000124 | PIRSF:PIRSF500133 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR11374 | PANTHER:PTHR11374:SF30 | UniProt:Q9FM01 | SMART:SM00984 | SUPFAM:SSF48179 |
| SUPFAM:SSF51735 | SUPFAM:SSF52413 | TIGRFAMs:TIGR03026 | InterPro:UDP-Glc/GDP-Man | InterPro:UDP-Glc/GDP-Man_DH_C | InterPro:UDP-Glc/GDP-Man_DH_C_sf |
| InterPro:UDP-Glc/GDP-Man_DH_N | InterPro:UDP-Glc/GDP-Man_DH_dimer | InterPro:UDPglc_DH_euk | UniParc:UPI00000A300F | : | : |
Description
UGD4UDP-glucose 6-dehydrogenase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM01]
Coordinates
chr5:+:15742543..15744946
Molecular Weight (calculated)
53099.9 Da
IEP (calculated)
5.561
GRAVY (calculated)
-0.052
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKICCIGAG YVGGPTMAVI ALKCPDIEVA VVDISVPRIN AWNSDQLPIY EPGLDDIVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTTGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LMHNSKGIKF QILSNPEFLA EGTAIADLFN PDRVLIGGRE TPEGFKAVQT LKEVYANWVP
201: EGQIITTNLW SAELSKLAAN AFLAQRISSV NAMSALCEST GADVTQVSYA VGTDSRIGSK FLNASVGFGG SCFQKDILNL VYICQCNGLP EVAEYWKQVI
301: KINDYQKNRF VNRIVSSMFN TVSNKKVAIL GFAFKKDTGD TRETPAIDVC KGLLGDKAQI SIYDPQVTEE QIQRDLSMKK FDWDHPLHLQ PMSPTTVKQV
401: SVTWDAYEAT KDAHAVCVLT EWDEFKSLDY QKIFDNMQKP AFIFDGRNIM NVNKLREIGF IVYSIGKPLD PWLKDMPAFV
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LMHNSKGIKF QILSNPEFLA EGTAIADLFN PDRVLIGGRE TPEGFKAVQT LKEVYANWVP
201: EGQIITTNLW SAELSKLAAN AFLAQRISSV NAMSALCEST GADVTQVSYA VGTDSRIGSK FLNASVGFGG SCFQKDILNL VYICQCNGLP EVAEYWKQVI
301: KINDYQKNRF VNRIVSSMFN TVSNKKVAIL GFAFKKDTGD TRETPAIDVC KGLLGDKAQI SIYDPQVTEE QIQRDLSMKK FDWDHPLHLQ PMSPTTVKQV
401: SVTWDAYEAT KDAHAVCVLT EWDEFKSLDY QKIFDNMQKP AFIFDGRNIM NVNKLREIGF IVYSIGKPLD PWLKDMPAFV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.