Factsheet for Os12t0443600-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 2
golgi 4
extracellular 5
plasma membrane 3
endoplasmic reticulum 3
vacuole 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0147150-00
Os03t0425600-00
Os03t0604200-01
Os03t0757900-01
Os04t0581600-01
Os12t0443500-01
Os12t0443600-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G39320.1	Os03t0147150-00	AT1G26570.1	21798944
AT5G39320.1	Os03t0425600-00	AT1G26570.1	21798944
AT5G39320.1	Os03t0604200-01	AT1G26570.1	21798944
AT5G39320.1	Os03t0757900-01	AT1G26570.1	21798944
AT5G39320.1	Os04t0581600-01	AT1G26570.1	21798944
AT5G39320.1	Os12t0443500-01	AT1G26570.1	21798944
AT5G39320.1	Os12t0443600-01	AT1G26570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0443500-01	Rice	plasma membrane	97.29	97.29
Os03t0757900-01	Rice	plasma membrane	96.88	96.88
Zm00001d034072_P001	Maize	extracellular	95.42	95.42
Zm00001d013245_P001	Maize	plasma membrane	95.42	95.42
KXG37519	Sorghum	cytosol, extracellular	95.42	95.42
Solyc02g088690.2.1	Tomato	nucleus	60.83	92.41
KRH01262	Soybean	nucleus	90.0	90.0
KRH44990	Soybean	nucleus	89.79	89.79
PGSC0003DMT400003666	Potato	extracellular, vacuole	89.79	89.61
Bra008695.1-P	Field mustard	extracellular, golgi	88.96	88.96
CDY26425	Canola	extracellular, golgi	88.96	88.96
PGSC0003DMT400064713	Potato	cytosol	85.83	88.79
Bra006303.1-P	Field mustard	extracellular, vacuole	88.75	88.75
CDX69521	Canola	cytosol	68.12	88.62
KRH18404	Soybean	endoplasmic reticulum	88.54	88.54
AT5G15490.1	Thale cress	extracellular, vacuole	88.54	88.54
KRG93627	Soybean	endoplasmic reticulum	88.12	88.12
PGSC0003DMT400087395	Potato	cytosol, golgi	88.12	88.12
AT3G29360.1	Thale cress	cytosol, vacuole	87.5	87.5
Bra026264.1-P	Field mustard	extracellular, vacuole	45.0	87.45
KRH70872	Soybean	endoplasmic reticulum	87.29	87.29
KRH75016	Soybean	endoplasmic reticulum	87.08	87.08
Solyc03g115380.1.1	Tomato	nucleus, unclear	87.08	87.08
CDY37001	Canola	cytosol, vacuole	86.88	86.88
CDX67427	Canola	cytosol, vacuole	86.88	86.88
Bra028430.1-P	Field mustard	cytosol, vacuole	86.88	86.88
CDX74475	Canola	extracellular	46.67	86.82
Bra028234.1-P	Field mustard	extracellular, vacuole	86.67	86.67
AT5G39320.1	Thale cress	extracellular	86.46	86.46
Solyc06g069550.1.1	Tomato	extracellular	86.46	86.46
Os03t0425600-00	Rice	plasma membrane	86.04	85.86
PGSC0003DMT400083187	Potato	extracellular	85.62	85.62
Solyc02g067080.2.1	Tomato	extracellular	89.38	84.28
Os03t0604200-01	Rice	plasma membrane	84.38	84.02
PGSC0003DMT400069038	Potato	cytosol	31.67	83.52
AT1G26570.1	Thale cress	cytosol, extracellular	83.33	83.16
AT3G01010.1	Thale cress	cytosol	27.08	82.28
Bra024708.1-P	Field mustard	cytosol, extracellular	82.29	82.12
CDY16166	Canola	cytosol	81.88	81.7
KRH03109	Soybean	cytosol	78.96	79.12
KRH56847	Soybean	cytosol	78.75	79.08
Bra025395.1-P	Field mustard	cytosol	15.62	78.95
CDX86369	Canola	cytosol	15.0	78.26
KRG89491	Soybean	cytosol	47.92	77.97
KRH15845	Soybean	cytosol	53.54	77.64
CDX70614	Canola	cytosol, mitochondrion, peroxisome, plastid	88.96	76.39
CDX90989	Canola	cytosol, golgi	86.46	75.73
CDX78633	Canola	cytosol	88.96	75.44
Solyc03g065350.1.1	Tomato	cytosol, extracellular, peroxisome	42.5	72.6
Bra023520.1-P	Field mustard	golgi	86.67	66.99
CDX85269	Canola	cytosol	30.21	65.91
CDX85549	Canola	cytosol	86.88	62.15
CDY15951	Canola	extracellular	7.29	48.61
Bra030352.1-P	Field mustard	extracellular	7.29	48.61
Os04t0581600-01	Rice	cytosol, mitochondrion, peroxisome	21.25	46.58
Os03t0147150-00	Rice	plasma membrane	17.29	34.02

Protein Annotations

KEGG:00040+1.1.1.22	KEGG:00053+1.1.1.22	KEGG:00520+1.1.1.22	Gene3D:1.20.5.100	MapMan:3.13.3.1	Gene3D:3.40.50.720
EntrezGene:4352147	InterPro:6-PGluconate_DH-like_C_sf	ProteinID:ABA97737.1	ProteinID:ABA97738.1	ProteinID:ABG22007.1	EMBL:AK099096
EMBL:AK103919	ProteinID:BAF29725.1	ProteinID:BAT16994.1	ProteinID:EEE53159.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003979	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006024	GO:GO:0006065	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016616
GO:GO:0051287	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os12g0443600	EnsemblPlants:Os12t0443600-01	PFAM:PF00984
PFAM:PF03720	PFAM:PF03721	PIRSF:PIRSF000124	PIRSF:PIRSF500133	PANTHER:PTHR11374	PANTHER:PTHR11374:SF30
UniProt:Q2QS13	SMART:SM00984	SUPFAM:SSF48179	SUPFAM:SSF51735	SUPFAM:SSF52413	TIGRFAMs:TIGR03026
InterPro:UDP-Glc/GDP-Man	InterPro:UDP-Glc/GDP-Man_DH_C	InterPro:UDP-Glc/GDP-Man_DH_C_sf	InterPro:UDP-Glc/GDP-Man_DH_N	InterPro:UDP-Glc/GDP-Man_DH_dimer	InterPro:UDPglc_DH_euk
UniParc:UPI00006812A0	RefSeq:XP_015620482.1	RefSeq:XP_015620483.1	RefSeq:XP_015620484.1	RefSeq:XP_015620486.1	:

Description

UGD5Similar to UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH). (Os12t0443600-01);Similar to UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH). (Os12t0443600-02)

Coordinates

chr12:+:14893170..14896144

Molecular Weight (calculated)

52921.5 Da

IEP (calculated)

5.977

GRAVY (calculated)

-0.083

Length

480 amino acids

Sequence
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPAIEVV VVDISKPRVD AWNSDQLPIY EPGLDEVVKE CRGRNLFFST DVEKHVAEAD IIFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSKSD KIVVEKSTVP VKTAEAIEKI LTHNSKGINY QILSNPEFLA EGTAIEDLFK PDRVLIGGRE TPEGKKAVQA LKEVYAHWVP
201: EDRIITTNLW SAELSKLAAN AFLAQRISSV NAISALCEAT GANVSEVAYA VGKDTRIGPK FLNASVGFGG SCFQKDILNL VYICECNGLP EVANYWKQVI
301: KINDYQKSRF VNRVVASMFN TVSGKKIAVL GFAFKKDTGD TRETPAIDVC HGLLGDKAQI SIYDPQVTED QIQRDLSMAK FDWDHPRHLQ PTSPTAFKQV
401: SVVWDAYEAT KGAHGLCILT EWDEFKTLDY QRIFDNMQKP AFVFDGRNVV DPEKLREIGF IVYSIGKPLD AWLKDMPAVA

Best Arabidopsis Sequence Match ( AT5G15490.1 )
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPSVEVA VVDISVPRIN AWNSDQLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFM PDRVLIGGRE TTEGFAAVKA LKDIYAQWVP
201: EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVSEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKARL SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV
401: SVAWDAYTAT KDAHGICILT EWDEFKKLDF QRIFENMQKP AFVFDGRNVV DADKLREIGF IVYSIGKPLD QWLKDMPALA

Arabidopsis Description

UGD3UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UJW9]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.