Factsheet for PGSC0003DMT400083187

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 2
golgi 4
extracellular 5
plasma membrane 3
endoplasmic reticulum 3
vacuole 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g069550.1.1	Tomato	extracellular	98.12	98.12
PGSC0003DMT400087395	Potato	cytosol, golgi	90.21	90.21
GSMUA_Achr4P03270_001	Banana	cytosol	68.75	87.53
PGSC0003DMT400003666	Potato	extracellular, vacuole	86.46	86.28
TraesCS5B01G399800.1	Wheat	unclear	86.25	86.25
GSMUA_Achr6P11090_001	Banana	cytosol	66.25	86.18
GSMUA_Achr4P14320_001	Banana	cytosol	73.54	86.1
Zm00001d034072_P001	Maize	extracellular	86.04	86.04
TraesCS5D01G404300.1	Wheat	golgi	86.04	86.04
Os03t0757900-01	Rice	plasma membrane	85.83	85.83
TraesCS5A01G394900.1	Wheat	extracellular, golgi	85.83	85.83
TraesCS4A01G199200.1	Wheat	extracellular, golgi	85.83	85.83
HORVU4Hr1G021270.1	Barley	extracellular, golgi	85.83	85.83
KXG37519	Sorghum	cytosol, extracellular	85.83	85.83
Os12t0443600-01	Rice	extracellular	85.62	85.62
HORVU5Hr1G096370.1	Barley	extracellular, golgi	85.62	85.62
TraesCS4B01G116200.1	Wheat	extracellular, golgi	85.62	85.62
TraesCS4D01G113800.1	Wheat	extracellular, golgi	85.62	85.62
GSMUA_Achr3P30310_001	Banana	cytosol	67.5	85.49
Zm00001d013245_P001	Maize	plasma membrane	85.42	85.42
GSMUA_Achr4P07270_001	Banana	extracellular, golgi	66.88	85.37
PGSC0003DMT400064713	Potato	cytosol	82.5	85.34
Os12t0443500-01	Rice	plasma membrane	85.21	85.21
EER95293	Sorghum	extracellular, vacuole	84.79	84.79
TraesCS4A01G264600.1	Wheat	extracellular	84.58	84.58
GSMUA_Achr10P...	Banana	cytosol	66.04	84.31
HORVU4Hr1G008270.1	Barley	extracellular, golgi	84.17	84.17
TraesCS4B01G050400.1	Wheat	extracellular	84.17	84.17
TraesCS4D01G050600.2	Wheat	extracellular	83.96	83.96
GSMUA_Achr11P...	Banana	cytosol	67.29	83.9
GSMUA_Achr6P23920_001	Banana	cytosol	57.08	83.79
GSMUA_Achr3P18750_001	Banana	extracellular, golgi	61.88	82.5
Os03t0425600-00	Rice	plasma membrane	80.21	80.04
GSMUA_Achr7P26580_001	Banana	cytosol	21.67	80.0
VIT_17s0000g06960.t01	Wine grape	endoplasmic reticulum, golgi	87.29	79.51
TraesCS4B01G077100.1	Wheat	cytosol, vacuole	78.75	78.75
Zm00001d033188_P001	Maize	extracellular	78.75	78.59
TraesCS4D01G075600.1	Wheat	cytosol, vacuole	78.75	78.59
PGSC0003DMT400069038	Potato	cytosol	29.79	78.57
TraesCS4A01G237900.1	Wheat	cytosol, vacuole	78.54	78.38
Os03t0604200-01	Rice	plasma membrane	78.54	78.22
KXG38049	Sorghum	endoplasmic reticulum, extracellular	78.12	75.15
Os04t0581600-01	Rice	cytosol, mitochondrion, peroxisome	20.42	44.75
GSMUA_Achr4P10820_001	Banana	plasma membrane	63.96	41.32
Os03t0147150-00	Rice	plasma membrane	17.08	33.61

Protein Annotations

KEGG:00040+1.1.1.22	KEGG:00053+1.1.1.22	KEGG:00520+1.1.1.22	Gene3D:1.20.5.100	EntrezGene:102579334	MapMan:3.13.3.1
Gene3D:3.40.50.720	InterPro:6-PGluconate_DH-like_C_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003979
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	UniProt:M1D6N8	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00984	PFAM:PF03720	PFAM:PF03721
EnsemblPlantsGene:PGSC0003DMG400033107	PGSC:PGSC0003DMG400033107	EnsemblPlants:PGSC0003DMT400083187	PIRSF:PIRSF000124	PIRSF:PIRSF500133	PANTHER:PTHR11374
PANTHER:PTHR11374:SF30	SMART:SM00984	SUPFAM:SSF48179	SUPFAM:SSF51735	SUPFAM:SSF52413	TIGRFAMs:TIGR03026
InterPro:UDP-Glc/GDP-Man	InterPro:UDP-Glc/GDP-Man_DH_C	InterPro:UDP-Glc/GDP-Man_DH_C_sf	InterPro:UDP-Glc/GDP-Man_DH_N	InterPro:UDP-Glc/GDP-Man_DH_dimer	InterPro:UDPglc_DH_euk
UniParc:UPI0002956A1B	RefSeq:XP_015167511.1	:	:	:	:

Description

UDP-glucose dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400033107]

Coordinates

chr6:+:51379076..51380781

Molecular Weight (calculated)

52973.8 Da

IEP (calculated)

6.273

GRAVY (calculated)

-0.064

Length

480 amino acids

Sequence
(BLAST)

001: MVKICCIGAG YVGGPTMAVI AFKCPAIEVA VVDISVARIA AWNSDQLPIY EPGLEDIVTQ CRGKNLFFST EVEKHVSEAD IIFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSKND KIVVEKSTVP VKTAEAIEKI LTHNSNGIKY QILSNPEFLA EGTAIQDLFN PDRVLIGGRE TPGGQKAIQT LKEVYAHWVP
201: EDRIICTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVSHA VGKDMRVGSK FLNASVGFGG SCFQKDILSL VYICECNGLK EVANYWKQVI
301: QVNDYQKNRF VNRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC KGLLGDNANL SIYDPQVTED QIRKDLSMRK FDWDNPIHLQ PMSPTVMKQL
401: NVVWDAYAAT KDAHGLCLLT EWDEFKTLDF KKIYDNMQKP AFVFDGRNII DEQKLREIGF IVYSIGKPLD GWLKDMPAVA

Best Arabidopsis Sequence Match ( AT3G29360.2 )
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPDVEVA VVDISVPRIN AWNSDTLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIKDLFN PDRVLIGGRE TPEGFKAVQT LKNVYAHWVP
201: EGQIITTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVSYA VGTDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKSRF VNRVVSSMFN SVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLEDKARL SIYDPQVTED QIQRDLSMNK FDWDHPLHLQ PMSPTTVKQV
401: TVTWDAYEAT KDAHGICIMT EWDEFKNLDF QKIFDNMQKP AFVFDGRNIM NLQKLREIGF IVYSIGKPLD DWLKDMPAVA

Arabidopsis Description

UGD2UDP-glucose 6-dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIA8]
SUBAcon: [cytosol,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.