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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • plastid 3
  • golgi 4
  • mitochondrion 1
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_01s0011g00690.t01 Wine grape cytosol, extracellular 81.4 89.38
PGSC0003DMT400087395 Potato cytosol, golgi 80.83 88.75
Solyc06g069550.1.1 Tomato extracellular 79.89 87.71
PGSC0003DMT400083187 Potato extracellular 79.51 87.29
Solyc03g115380.1.1 Tomato nucleus, unclear 79.32 87.08
VIT_14s0108g01590.t01 Wine grape cytosol 12.71 84.81
Protein Annotations
KEGG:00040+1.1.1.22KEGG:00053+1.1.1.22KEGG:00520+1.1.1.22Gene3D:1.20.5.100EntrezGene:100250128wikigene:100250128
MapMan:3.13.3.1Gene3D:3.40.50.720InterPro:6-PGluconate_DH-like_C_sfEMBL:AM455921ProteinID:CAN81053ProteinID:CAN81053.1
ProteinID:CCB43049ProteinID:CCB43049.1UniProt:F6GT25EMBL:FN594950GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0003979GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0005737GO:GO:0005829GO:GO:0006024GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0016491GO:GO:0016616GO:GO:0051287GO:GO:0055114EntrezGene:LOC100250128
wikigene:LOC100250128InterPro:NAD(P)-bd_dom_sfPFAM:PF00984PFAM:PF03720PFAM:PF03721PIRSF:PIRSF000124
PIRSF:PIRSF500133PANTHER:PTHR11374PANTHER:PTHR11374:SF30SMART:SM00984SUPFAM:SSF48179SUPFAM:SSF51735
SUPFAM:SSF52413TIGRFAMs:TIGR03026InterPro:UDP-Glc/GDP-ManInterPro:UDP-Glc/GDP-Man_DH_CInterPro:UDP-Glc/GDP-Man_DH_C_sfInterPro:UDP-Glc/GDP-Man_DH_N
InterPro:UDP-Glc/GDP-Man_DH_dimerInterPro:UDPglc_DH_eukUniParc:UPI00021094CAArrayExpress:VIT_17s0000g06960EnsemblPlantsGene:VIT_17s0000g06960EnsemblPlants:VIT_17s0000g06960.t01
unigene:Vvi.17187RefSeq:XP_002284402RefSeq:XP_002284402.1SEG:seg::
Description
UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F6GT25]
Coordinates
chr17:-:7659649..7663566
Molecular Weight (calculated)
58383.5 Da
IEP (calculated)
7.828
GRAVY (calculated)
-0.031
Length
527 amino acids
Sequence
(BLAST)
001: MQCNPIERYP LQCKTLFLSF SLSYSSEVRL FLVGFIALFK VFHNTTKMVK ICCIGAGYVG GPTMAVIALK CPSIEVAVVD ISISRITAWN SDQLPIYEPG
101: LEEVVKQCRG RNLFFSTNVE KHISEADIIF VSVNTPTKTR GLGAGKAADL TYWESAARMI ADVSKSNKIV VEKSTVPVKT AEAIEKILSH NSKGISYQIL
201: SNPEFLAEGT AIQDLLNPDR VLIGGRETPG GQKAIKALKD VYAHWVPEDR IISTNLWSAE LSKLAANAFL AQRISSVNAM SALCEATGAD VSEVSHAIGK
301: DSRIGPKFLN ASVGFGGSCF QKDILNLIYI CECNGLPEVA NYWKQVIKVN DYQKNRFVNR VVASMFNTVS GKKIAILGFA FKKDTGDTRE TPAIDVCKGL
401: LGDKASLSIY DPQVTGDQIQ REISMNKFDW DHPVHLQPMS PTSVKQVNVV WDPYEATRDA HGICILTEWD EFKTLDYQRI FNNMQKPAFV FDGRNIVNIE
501: KLREIGFIVY SIGKPLDPWL KDMPAIA
Best Arabidopsis Sequence Match ( AT5G15490.1 )
(BLAST)
001: MVKICCIGAG YVGGPTMAVI ALKCPSVEVA VVDISVPRIN AWNSDQLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFM PDRVLIGGRE TTEGFAAVKA LKDIYAQWVP
201: EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVSEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKARL SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV
401: SVAWDAYTAT KDAHGICILT EWDEFKKLDF QRIFENMQKP AFVFDGRNVV DADKLREIGF IVYSIGKPLD QWLKDMPALA
Arabidopsis Description
UGD3UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UJW9]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.