Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 4
- mitochondrion 1
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_01s0011g00690.t01 | Wine grape | cytosol, extracellular | 81.4 | 89.38 |
PGSC0003DMT400087395 | Potato | cytosol, golgi | 80.83 | 88.75 |
Solyc06g069550.1.1 | Tomato | extracellular | 79.89 | 87.71 |
PGSC0003DMT400083187 | Potato | extracellular | 79.51 | 87.29 |
Solyc03g115380.1.1 | Tomato | nucleus, unclear | 79.32 | 87.08 |
VIT_14s0108g01590.t01 | Wine grape | cytosol | 12.71 | 84.81 |
Protein Annotations
KEGG:00040+1.1.1.22 | KEGG:00053+1.1.1.22 | KEGG:00520+1.1.1.22 | Gene3D:1.20.5.100 | EntrezGene:100250128 | wikigene:100250128 |
MapMan:3.13.3.1 | Gene3D:3.40.50.720 | InterPro:6-PGluconate_DH-like_C_sf | EMBL:AM455921 | ProteinID:CAN81053 | ProteinID:CAN81053.1 |
ProteinID:CCB43049 | ProteinID:CCB43049.1 | UniProt:F6GT25 | EMBL:FN594950 | GO:GO:0000166 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0003979 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006024 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0016491 | GO:GO:0016616 | GO:GO:0051287 | GO:GO:0055114 | EntrezGene:LOC100250128 |
wikigene:LOC100250128 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00984 | PFAM:PF03720 | PFAM:PF03721 | PIRSF:PIRSF000124 |
PIRSF:PIRSF500133 | PANTHER:PTHR11374 | PANTHER:PTHR11374:SF30 | SMART:SM00984 | SUPFAM:SSF48179 | SUPFAM:SSF51735 |
SUPFAM:SSF52413 | TIGRFAMs:TIGR03026 | InterPro:UDP-Glc/GDP-Man | InterPro:UDP-Glc/GDP-Man_DH_C | InterPro:UDP-Glc/GDP-Man_DH_C_sf | InterPro:UDP-Glc/GDP-Man_DH_N |
InterPro:UDP-Glc/GDP-Man_DH_dimer | InterPro:UDPglc_DH_euk | UniParc:UPI00021094CA | ArrayExpress:VIT_17s0000g06960 | EnsemblPlantsGene:VIT_17s0000g06960 | EnsemblPlants:VIT_17s0000g06960.t01 |
unigene:Vvi.17187 | RefSeq:XP_002284402 | RefSeq:XP_002284402.1 | SEG:seg | : | : |
Description
UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F6GT25]
Coordinates
chr17:-:7659649..7663566
Molecular Weight (calculated)
58383.5 Da
IEP (calculated)
7.828
GRAVY (calculated)
-0.031
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MQCNPIERYP LQCKTLFLSF SLSYSSEVRL FLVGFIALFK VFHNTTKMVK ICCIGAGYVG GPTMAVIALK CPSIEVAVVD ISISRITAWN SDQLPIYEPG
101: LEEVVKQCRG RNLFFSTNVE KHISEADIIF VSVNTPTKTR GLGAGKAADL TYWESAARMI ADVSKSNKIV VEKSTVPVKT AEAIEKILSH NSKGISYQIL
201: SNPEFLAEGT AIQDLLNPDR VLIGGRETPG GQKAIKALKD VYAHWVPEDR IISTNLWSAE LSKLAANAFL AQRISSVNAM SALCEATGAD VSEVSHAIGK
301: DSRIGPKFLN ASVGFGGSCF QKDILNLIYI CECNGLPEVA NYWKQVIKVN DYQKNRFVNR VVASMFNTVS GKKIAILGFA FKKDTGDTRE TPAIDVCKGL
401: LGDKASLSIY DPQVTGDQIQ REISMNKFDW DHPVHLQPMS PTSVKQVNVV WDPYEATRDA HGICILTEWD EFKTLDYQRI FNNMQKPAFV FDGRNIVNIE
501: KLREIGFIVY SIGKPLDPWL KDMPAIA
101: LEEVVKQCRG RNLFFSTNVE KHISEADIIF VSVNTPTKTR GLGAGKAADL TYWESAARMI ADVSKSNKIV VEKSTVPVKT AEAIEKILSH NSKGISYQIL
201: SNPEFLAEGT AIQDLLNPDR VLIGGRETPG GQKAIKALKD VYAHWVPEDR IISTNLWSAE LSKLAANAFL AQRISSVNAM SALCEATGAD VSEVSHAIGK
301: DSRIGPKFLN ASVGFGGSCF QKDILNLIYI CECNGLPEVA NYWKQVIKVN DYQKNRFVNR VVASMFNTVS GKKIAILGFA FKKDTGDTRE TPAIDVCKGL
401: LGDKASLSIY DPQVTGDQIQ REISMNKFDW DHPVHLQPMS PTSVKQVNVV WDPYEATRDA HGICILTEWD EFKTLDYQRI FNNMQKPAFV FDGRNIVNIE
501: KLREIGFIVY SIGKPLDPWL KDMPAIA
001: MVKICCIGAG YVGGPTMAVI ALKCPSVEVA VVDISVPRIN AWNSDQLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFM PDRVLIGGRE TTEGFAAVKA LKDIYAQWVP
201: EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVSEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKARL SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV
401: SVAWDAYTAT KDAHGICILT EWDEFKKLDF QRIFENMQKP AFVFDGRNVV DADKLREIGF IVYSIGKPLD QWLKDMPALA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFM PDRVLIGGRE TTEGFAAVKA LKDIYAQWVP
201: EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVSEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKARL SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV
401: SVAWDAYTAT KDAHGICILT EWDEFKKLDF QRIFENMQKP AFVFDGRNVV DADKLREIGF IVYSIGKPLD QWLKDMPALA
Arabidopsis Description
UGD3UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UJW9]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.